RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 SRSF1Q07955 248 aaKnown RBP eCLIP7.08□□□□□ -1.28
CAPN3-206ENST00000397163 LAGE3Q14657 143 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 RNF182Q8N6D2 247 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 CFHR4Q92496 578 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 AJUBAQ96IF1 538 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 B9A039 149 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 HLA-DRB4P13762 266 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 NDPQ00604 133 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 ZFAND6Q6FIF0 208 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 TEX29Q8N6K0 151 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 NPBQ8NG41 125 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 HLA-DRB4X5D2U9 266 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 SVEP1Q4LDE5 3571 aa7.08□□□□□ -1.28
CAPN3-206ENST00000397163 LAMA5O15230 3695 aa7.07□□□□□ -1.28
CAPN3-206ENST00000397163 CTSGP08311 255 aa7.07□□□□□ -1.28
CAPN3-206ENST00000397163 EFNA4P52798 201 aa7.07□□□□□ -1.28
CAPN3-206ENST00000397163 C1orf122Q6ZSJ8 110 aa7.07□□□□□ -1.28
CAPN3-206ENST00000397163 IGLV2-18A0A075B6J9 118 aa7.07□□□□□ -1.28
CAPN3-206ENST00000397163 A0A087WX48 190 aa7.07□□□□□ -1.28
CAPN3-206ENST00000397163 IGHV3-66A0A0C4DH42 116 aa7.07□□□□□ -1.28
CAPN3-206ENST00000397163 NHLRC4P0CG21 123 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-206ENST00000397163 RPL32P62910 135 aaKnown RBP7.07□□□□□ -1.28
CAPN3-206ENST00000397163 TAL2Q16559 108 aa7.07□□□□□ -1.28
CAPN3-206ENST00000397163 IGF2RP11717 2491 aa7.07□□□□□ -1.28
CAPN3-206ENST00000397163 ATMQ13315 3056 aa7.07□□□□□ -1.28
CAPN3-206ENST00000397163 IGKV3D-20A0A0C4DH25 116 aa7.06□□□□□ -1.28
CAPN3-206ENST00000397163 HOXA3O43365 443 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-206ENST00000397163 CD3EP07766 207 aa7.06□□□□□ -1.28
CAPN3-206ENST00000397163 DLX4Q92988 240 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-206ENST00000397163 IGHV3OR16-13A0A075B7E8 117 aa7.06□□□□□ -1.28
CAPN3-206ENST00000397163 IGHV3-74A0A0B4J1X5 117 aa7.06□□□□□ -1.28
CAPN3-206ENST00000397163 UCNP55089 124 aa7.06□□□□□ -1.28
CAPN3-206ENST00000397163 DEFB104AQ8WTQ1 72 aa7.06□□□□□ -1.28
CAPN3-206ENST00000397163 CHD8Q9HCK8 2581 aa7.06□□□□□ -1.28
CAPN3-206ENST00000397163 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-206ENST00000397163 SPANXN1Q5VSR9 72 aa7.06□□□□□ -1.28
CAPN3-206ENST00000397163 AKAP13Q12802 2813 aa7.06□□□□□ -1.28
CAPN3-206ENST00000397163 PLNP26678 52 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 C11orf21Q9P2W6 132 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 ANKRD11Q6UB99 2663 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-206ENST00000397163 TRBV7-3A0A075B6L6 115 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 CRLF1O75462 422 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 TMEM95Q3KNT9 176 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 NRACQ8N912 160 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 AGPAT4-IT1Q9H0P7 198 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 ADGRG4Q8IZF6 3080 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 TRAV4A0A0B4J268 109 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 ZNF672Q499Z4 452 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-206ENST00000397163 TMEM78Q5T7P6 136 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 ANKRD29Q8N6D5 301 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 OR11H6Q8NGC7 330 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 PSMG3-AS1Q96PY0 264 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 RAXQ9Y2V3 346 aa7.05□□□□□ -1.28
CAPN3-206ENST00000397163 ARHGAP32A7KAX9 2087 aa7.04□□□□□ -1.28
CAPN3-206ENST00000397163 ACACBO00763 2458 aa7.04□□□□□ -1.28
CAPN3-206ENST00000397163 IGHV3-49A0A0A0MS15 119 aa7.04□□□□□ -1.28
CAPN3-206ENST00000397163 H7C1H1 209 aa7.04□□□□□ -1.28
CAPN3-206ENST00000397163 LY6HO94772 140 aa7.04□□□□□ -1.28
CAPN3-206ENST00000397163 HIF1ANQ9NWT6 349 aa7.04□□□□□ -1.28
CAPN3-206ENST00000397163 PTPRQQ9UMZ3 2332 aa7.04□□□□□ -1.28
CAPN3-206ENST00000397163 MYMXA0A1B0GTQ4 84 aa7.04□□□□□ -1.28
CAPN3-206ENST00000397163 F8VRH5 84 aa7.04□□□□□ -1.28
CAPN3-206ENST00000397163 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.04□□□□□ -1.28
CAPN3-206ENST00000397163 SCGB1D4Q6XE38 83 aa7.04□□□□□ -1.28
CAPN3-206ENST00000397163 PPDPFLQ8WWR9 84 aa7.04□□□□□ -1.28
CAPN3-206ENST00000397163 TCL1BO95988 128 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 CLEC3BP05452 202 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 ID1P41134 155 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 LY6G5BQ8NDX9 201 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 PLEKHB2Q96CS7 222 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 SCGB3A1Q96QR1 104 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 SLC50A1Q9BRV3 221 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 ABCA4P78363 2273 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 TRAV8-2A0A0B4J237 113 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 IGHV7-4-1A0A0J9YVY3 117 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 H7C2G1 150 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 BUB3O43684 328 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 ZNF688P0C7X2 276 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 SRSF9Q13242 221 aaKnown RBP eCLIP7.03□□□□□ -1.28
CAPN3-206ENST00000397163 ECSCRQ19T08 205 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 C15orf32Q32M92 178 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 LINC01560Q8TB33 94 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 VKORC1Q9BQB6 163 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 RBAKDNA6NC62 111 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 Q6ZQT7 251 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 TEN1Q86WV5 123 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 FAM110AQ9BQ89 295 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 SMIM2Q9BVW6 85 aa7.03□□□□□ -1.28
CAPN3-206ENST00000397163 J3KRW8 73 aa7.02□□□□□ -1.29
CAPN3-206ENST00000397163 EMP1P54849 157 aa7.02□□□□□ -1.29
CAPN3-206ENST00000397163 FAM159AQ6UWV7 190 aa7.02□□□□□ -1.29
CAPN3-206ENST00000397163 CACNA1BQ00975 2339 aa7.02□□□□□ -1.29
CAPN3-206ENST00000397163 K7ENP7 123 aa7.02□□□□□ -1.29
CAPN3-206ENST00000397163 LGALS1P09382 135 aaKnown RBP7.02□□□□□ -1.29
CAPN3-206ENST00000397163 NDUFV3P56181 108 aaKnown RBP7.02□□□□□ -1.29
CAPN3-206ENST00000397163 KLHL30-AS1Q8NEE0 82 aa7.02□□□□□ -1.29
CAPN3-206ENST00000397163 IGHV7-81A0A0B4J1V7 117 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 TRAV12-1A0A0B4J245 112 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 GAGE12JA6NER3 117 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 GAGE7O76087 117 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms