RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 GGTLC3B5MD39 225 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 UMAD1C9J7I0 102 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 F6UZH7 168 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 M0R2P5 195 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 RTL8CO15255 209 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 PAX4O43316 350 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 PKD1P98161 4303 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 Q9H8V8 135 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 MRPL16Q9NX20 251 aaKnown RBP9.69□□□□□ -0.86
SEC13-204ENST00000397099 MDFICQ9P1T7 246 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 NAGKQ9UJ70 344 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 HHLA3Q9XRX5 114 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 ICOSQ9Y6W8 199 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 ARL2-SNX15V9GYD0 113 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 IFNA7P01567 189 aa9.68□□□□□ -0.86
SEC13-204ENST00000397099 ORM1P02763 201 aa9.68□□□□□ -0.86
SEC13-204ENST00000397099 PFN1P07737 140 aaKnown RBP9.68□□□□□ -0.86
SEC13-204ENST00000397099 SEC11BP0C7V7 166 aa9.68□□□□□ -0.86
SEC13-204ENST00000397099 FHITP49789 147 aa9.68□□□□□ -0.86
SEC13-204ENST00000397099 MRPL23Q16540 153 aaKnown RBP9.68□□□□□ -0.86
SEC13-204ENST00000397099 Q6ZQT7 251 aa9.68□□□□□ -0.86
SEC13-204ENST00000397099 TVP23CQ96ET8 276 aa9.68□□□□□ -0.86
SEC13-204ENST00000397099 VSIG2Q96IQ7 327 aa9.68□□□□□ -0.86
SEC13-204ENST00000397099 CYTL1Q9NRR1 136 aa9.68□□□□□ -0.86
SEC13-204ENST00000397099 MRPS16Q9Y3D3 137 aaKnown RBP9.68□□□□□ -0.86
SEC13-204ENST00000397099 A0A096LPF7 62 aa9.67□□□□□ -0.86
SEC13-204ENST00000397099 TRAV4A0A0B4J268 109 aa9.67□□□□□ -0.86
SEC13-204ENST00000397099 TRGV4A0A0C4DH28 118 aa9.67□□□□□ -0.86
SEC13-204ENST00000397099 IGHV3-16A0A0C4DH30 117 aa9.67□□□□□ -0.86
SEC13-204ENST00000397099 KANTRA0A1W2PQU2 76 aa9.67□□□□□ -0.86
SEC13-204ENST00000397099 MAP1LC3B2A6NCE7 125 aa9.67□□□□□ -0.86
SEC13-204ENST00000397099 GCGP01275 180 aa9.67□□□□□ -0.86
SEC13-204ENST00000397099 CRYBA4P53673 196 aa9.67□□□□□ -0.86
SEC13-204ENST00000397099 ZNF726P1Q15940 193 aa9.67□□□□□ -0.86
SEC13-204ENST00000397099 DPPA3Q6W0C5 159 aa9.67□□□□□ -0.86
SEC13-204ENST00000397099 SH2D6Q7Z4S9 175 aa9.67□□□□□ -0.86
SEC13-204ENST00000397099 MAP1LC3BQ9GZQ8 125 aa9.67□□□□□ -0.86
SEC13-204ENST00000397099 A0A1B0GVY2 172 aa9.66□□□□□ -0.86
SEC13-204ENST00000397099 FAM74A7A6NL05 159 aa9.66□□□□□ -0.86
SEC13-204ENST00000397099 IGLV2-11P01706 119 aa9.66□□□□□ -0.86
SEC13-204ENST00000397099 TYMSP04818 313 aa9.66□□□□□ -0.86
SEC13-204ENST00000397099 FHL2Q14192 279 aa9.66□□□□□ -0.86
SEC13-204ENST00000397099 ESRGQ1W209 222 aa9.66□□□□□ -0.86
SEC13-204ENST00000397099 PRNTQ86SH4 94 aa9.66□□□□□ -0.86
SEC13-204ENST00000397099 C6orf223Q8N319 242 aa9.66□□□□□ -0.86
SEC13-204ENST00000397099 PCNPQ8WW12 178 aaKnown RBP9.66□□□□□ -0.86
SEC13-204ENST00000397099 PTH2Q96A98 100 aa9.66□□□□□ -0.86
SEC13-204ENST00000397099 C9JCJ5 164 aa9.65□□□□□ -0.86
SEC13-204ENST00000397099 K7EP13 123 aa9.65□□□□□ -0.86
SEC13-204ENST00000397099 PEX7O00628 323 aa9.65□□□□□ -0.86
SEC13-204ENST00000397099 BCL2L11O43521 198 aa9.65□□□□□ -0.86
SEC13-204ENST00000397099 LGALSLQ3ZCW2 172 aaPredicted RBP9.65□□□□□ -0.86
SEC13-204ENST00000397099 OR4C5Q8NGB2 326 aa9.65□□□□□ -0.86
SEC13-204ENST00000397099 FMC1Q96HJ9 113 aa9.65□□□□□ -0.86
SEC13-204ENST00000397099 TXNDC17Q9BRA2 123 aa9.65□□□□□ -0.86
SEC13-204ENST00000397099 ZFP30Q9Y2G7 519 aa9.65□□□□□ -0.86
SEC13-204ENST00000397099 BOLA1Q9Y3E2 137 aa9.65□□□□□ -0.86
SEC13-204ENST00000397099 FABP5P3A8MUU1 101 aa9.64□□□□□ -0.87
SEC13-204ENST00000397099 GNRH2O43555 120 aa9.64□□□□□ -0.87
SEC13-204ENST00000397099 IGHV3-53P01767 116 aa9.64□□□□□ -0.87
SEC13-204ENST00000397099 PIK3CD-AS1Q5SR53 167 aa9.64□□□□□ -0.87
SEC13-204ENST00000397099 EIF5AL1Q6IS14 154 aaKnown RBP9.64□□□□□ -0.87
SEC13-204ENST00000397099 NEGR1Q7Z3B1 354 aa9.64□□□□□ -0.87
SEC13-204ENST00000397099 SGK494Q96LW2 274 aa9.64□□□□□ -0.87
SEC13-204ENST00000397099 SMLR1H3BR10 107 aa9.63□□□□□ -0.87
SEC13-204ENST00000397099 PFDN1O60925 122 aa9.63□□□□□ -0.87
SEC13-204ENST00000397099 S100A9P06702 114 aaKnown RBP9.63□□□□□ -0.87
SEC13-204ENST00000397099 TPT1P13693 172 aaKnown RBP9.63□□□□□ -0.87
SEC13-204ENST00000397099 SRIP30626 198 aa9.63□□□□□ -0.87
SEC13-204ENST00000397099 FGF8P55075 233 aaPredicted RBP9.63□□□□□ -0.87
SEC13-204ENST00000397099 UBE2G2P60604 165 aa9.63□□□□□ -0.87
SEC13-204ENST00000397099 UBE2G1P62253 170 aa9.63□□□□□ -0.87
SEC13-204ENST00000397099 COX8CQ7Z4L0 72 aa9.63□□□□□ -0.87
SEC13-204ENST00000397099 ZNF479Q96JC4 524 aa9.63□□□□□ -0.87
SEC13-204ENST00000397099 C8orf49Q96NF6 230 aa9.63□□□□□ -0.87
SEC13-204ENST00000397099 ZNF471Q9BX82 626 aaPredicted RBP9.63□□□□□ -0.87
SEC13-204ENST00000397099 KRTAP17-1Q9BYP8 105 aa9.63□□□□□ -0.87
SEC13-204ENST00000397099 TRBV6-1A0A0K0K1D8 114 aa9.62□□□□□ -0.87
SEC13-204ENST00000397099 ZNF80P51504 273 aaPredicted RBP9.62□□□□□ -0.87
SEC13-204ENST00000397099 ZNF876PQ49A33 203 aa9.62□□□□□ -0.87
SEC13-204ENST00000397099 SFT2D1Q8WV19 159 aa9.62□□□□□ -0.87
SEC13-204ENST00000397099 MBD3L1Q8WWY6 194 aa9.62□□□□□ -0.87
SEC13-204ENST00000397099 TRAV9-2A0A087WT02 112 aa9.61□□□□□ -0.87
SEC13-204ENST00000397099 SIVA1O15304 175 aa9.61□□□□□ -0.87
SEC13-204ENST00000397099 MED14OSP0DP75 135 aa9.61□□□□□ -0.87
SEC13-204ENST00000397099 S100A4P26447 101 aaKnown RBP9.61□□□□□ -0.87
SEC13-204ENST00000397099 RAB5CP51148 216 aa9.61□□□□□ -0.87
SEC13-204ENST00000397099 CST9LP1Q5W188 147 aa9.61□□□□□ -0.87
SEC13-204ENST00000397099 Q86TA4 180 aa9.61□□□□□ -0.87
SEC13-204ENST00000397099 OR11H4Q8NGC9 324 aa9.61□□□□□ -0.87
SEC13-204ENST00000397099 FAM213BQ8TBF2 198 aa9.61□□□□□ -0.87
SEC13-204ENST00000397099 C9orf85Q96MD7 179 aa9.61□□□□□ -0.87
SEC13-204ENST00000397099 HERC2O95714 4834 aa9.61□□□□□ -0.87
SEC13-204ENST00000397099 TEX46H3BTG2 121 aa9.6□□□□□ -0.87
SEC13-204ENST00000397099 K7EQD1 137 aa9.6□□□□□ -0.87
SEC13-204ENST00000397099 H2AFB1P0C5Y9 115 aa9.6□□□□□ -0.87
SEC13-204ENST00000397099 SFTA3P0C7M3 94 aa9.6□□□□□ -0.87
SEC13-204ENST00000397099 ASIPP42127 132 aa9.6□□□□□ -0.87
SEC13-204ENST00000397099 LYPD5Q6UWN5 251 aa9.6□□□□□ -0.87
SEC13-204ENST00000397099 LINC00479Q96M42 142 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms