RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 KCNS1Q96KK3 526 aa10□□□□□ -0.81
MCF2L-209ENST00000397036 MDFIQ99750 246 aa10□□□□□ -0.81
MCF2L-209ENST00000397036 LINC00467Q9BRT7 94 aa10□□□□□ -0.81
MCF2L-209ENST00000397036 F2Z2F3 143 aa9.99□□□□□ -0.81
MCF2L-209ENST00000397036 IGLC6P0CF74 106 aa9.99□□□□□ -0.81
MCF2L-209ENST00000397036 RIPPLY3P57055 190 aa9.99□□□□□ -0.81
MCF2L-209ENST00000397036 WDR73Q6P4I2 378 aa9.99□□□□□ -0.81
MCF2L-209ENST00000397036 Q8N1Y9 231 aa9.99□□□□□ -0.81
MCF2L-209ENST00000397036 SSBP4Q9BWG4 385 aaPredicted RBP9.99□□□□□ -0.81
MCF2L-209ENST00000397036 SRD5A3Q9H8P0 318 aa9.99□□□□□ -0.81
MCF2L-209ENST00000397036 MED14OSP0DP75 135 aa9.98□□□□□ -0.81
MCF2L-209ENST00000397036 CNFNQ9BYD5 112 aa9.98□□□□□ -0.81
MCF2L-209ENST00000397036 TRAV12-3A0A0B4J271 114 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 A0A1B0GW15 77 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 J3KRW8 73 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 OR5AL1P0C617 328 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 CTRLP40313 264 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 TCL1AP56279 114 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 ANXA2RQ3ZCQ2 193 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 FAM159AQ6UWV7 190 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 Q6ZQT7 251 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 TRAV12-2A0A075B6T6 113 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 A0A1B0GUT8 65 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 A0A1B0GXF2 115 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 SNAI2O43623 268 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 GZMBP10144 247 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 TMEM256Q8N2U0 113 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 DEFB125Q8N687 156 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 FER1L6-AS1Q8NA97 138 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 C1QTNF4Q9BXJ3 329 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 TP53TG3Q9ULZ0 132 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 ANK2Q01484 3957 aa9.97□□□□□ -0.81
MCF2L-209ENST00000397036 IGHV1OR15-1A0A075B7D0 117 aa9.96□□□□□ -0.82
MCF2L-209ENST00000397036 TMSB15BA0A087X1C1 80 aa9.96□□□□□ -0.82
MCF2L-209ENST00000397036 INSP01308 110 aa9.96□□□□□ -0.82
MCF2L-209ENST00000397036 GIG44P09565 113 aaPredicted RBP9.96□□□□□ -0.82
MCF2L-209ENST00000397036 KRTAP21-3Q3LHN1 58 aa9.96□□□□□ -0.82
MCF2L-209ENST00000397036 OXLD1Q5BKU9 147 aa9.96□□□□□ -0.82
MCF2L-209ENST00000397036 PGLYRP4Q96LB8 373 aa9.96□□□□□ -0.82
MCF2L-209ENST00000397036 GNB1LQ9BYB4 327 aa9.96□□□□□ -0.82
MCF2L-209ENST00000397036 SCRT2Q9NQ03 307 aa9.96□□□□□ -0.82
MCF2L-209ENST00000397036 IGHV4-4A0A075B6R2 117 aa9.95□□□□□ -0.82
MCF2L-209ENST00000397036 KIR2DL5BA0A0G2JN68 375 aa9.95□□□□□ -0.82
MCF2L-209ENST00000397036 KIR2DL5BA0A0G2JPC4 375 aa9.95□□□□□ -0.82
MCF2L-209ENST00000397036 S100A8P05109 93 aa9.95□□□□□ -0.82
MCF2L-209ENST00000397036 RIGQ13278 110 aa9.95□□□□□ -0.82
MCF2L-209ENST00000397036 LYZL1Q6UWQ5 148 aa9.95□□□□□ -0.82
MCF2L-209ENST00000397036 KIR2DL5AQ8N109 375 aa9.95□□□□□ -0.82
MCF2L-209ENST00000397036 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.95□□□□□ -0.82
MCF2L-209ENST00000397036 KIR2DL5BQ8NHK3 375 aa9.95□□□□□ -0.82
MCF2L-209ENST00000397036 WFDC10AQ9H1F0 79 aa9.95□□□□□ -0.82
MCF2L-209ENST00000397036 MT-ND6P03923 174 aa9.94□□□□□ -0.82
MCF2L-209ENST00000397036 ASIPP42127 132 aa9.94□□□□□ -0.82
MCF2L-209ENST00000397036 RPS10P46783 165 aaKnown RBP9.94□□□□□ -0.82
MCF2L-209ENST00000397036 FXYD7P58549 80 aa9.94□□□□□ -0.82
MCF2L-209ENST00000397036 GATD1Q8NB37 220 aa9.94□□□□□ -0.82
MCF2L-209ENST00000397036 BORCS7Q96B45 105 aa9.94□□□□□ -0.82
MCF2L-209ENST00000397036 GRIFINA4D1Z8 144 aa9.93□□□□□ -0.82
MCF2L-209ENST00000397036 A8MZ25 164 aa9.93□□□□□ -0.82
MCF2L-209ENST00000397036 RBMY1A1P0DJD3 496 aaKnown RBP9.93□□□□□ -0.82
MCF2L-209ENST00000397036 RBMY1CP0DJD4 496 aa9.93□□□□□ -0.82
MCF2L-209ENST00000397036 CACNG7P62955 275 aa9.93□□□□□ -0.82
MCF2L-209ENST00000397036 HBBP68871 147 aa9.93□□□□□ -0.82
MCF2L-209ENST00000397036 RBMY1FQ15415 496 aaKnown RBP9.93□□□□□ -0.82
MCF2L-209ENST00000397036 MUC21Q5SSG8 566 aa9.93□□□□□ -0.82
MCF2L-209ENST00000397036 SAMD5Q5TGI4 173 aa9.93□□□□□ -0.82
MCF2L-209ENST00000397036 CSTL1Q9H114 145 aa9.93□□□□□ -0.82
MCF2L-209ENST00000397036 XCL2Q9UBD3 114 aa9.93□□□□□ -0.82
MCF2L-209ENST00000397036 NAGKQ9UJ70 344 aa9.93□□□□□ -0.82
MCF2L-209ENST00000397036 TRGV11A0A075B6L2 103 aa9.92□□□□□ -0.82
MCF2L-209ENST00000397036 GNRH2O43555 120 aa9.92□□□□□ -0.82
MCF2L-209ENST00000397036 ARMS2P0C7Q2 107 aa9.92□□□□□ -0.82
MCF2L-209ENST00000397036 RNASE3P12724 160 aaKnown RBP9.92□□□□□ -0.82
MCF2L-209ENST00000397036 S100A4P26447 101 aaKnown RBP9.92□□□□□ -0.82
MCF2L-209ENST00000397036 MRPL54Q6P161 138 aaKnown RBP9.92□□□□□ -0.82
MCF2L-209ENST00000397036 C1orf158Q8N1D5 194 aa9.92□□□□□ -0.82
MCF2L-209ENST00000397036 CSNK1G2-AS1Q8NCQ2 148 aa9.92□□□□□ -0.82
MCF2L-209ENST00000397036 LOC102724200A0A096LPH7 203 aaPredicted RBP9.92□□□□□ -0.82
MCF2L-209ENST00000397036 IGHV3-16A0A0C4DH30 117 aa9.92□□□□□ -0.82
MCF2L-209ENST00000397036 PHOX2AO14813 284 aa9.92□□□□□ -0.82
MCF2L-209ENST00000397036 HLA-DQA1P01909 254 aa9.92□□□□□ -0.82
MCF2L-209ENST00000397036 RPL35AP18077 110 aaKnown RBP9.92□□□□□ -0.82
MCF2L-209ENST00000397036 KRTAP10-11P60412 298 aa9.92□□□□□ -0.82
MCF2L-209ENST00000397036 ZNF493Q6ZR52 646 aa9.92□□□□□ -0.82
MCF2L-209ENST00000397036 TMEM136Q6ZRR5 245 aa9.92□□□□□ -0.82
MCF2L-209ENST00000397036 SPINK4O60575 86 aa9.91□□□□□ -0.82
MCF2L-209ENST00000397036 PTH2Q96A98 100 aa9.91□□□□□ -0.82
MCF2L-209ENST00000397036 C9orf85Q96MD7 179 aa9.91□□□□□ -0.82
MCF2L-209ENST00000397036 LINC01587Q99440 93 aa9.91□□□□□ -0.82
MCF2L-209ENST00000397036 GOLT1BQ9Y3E0 138 aa9.91□□□□□ -0.82
MCF2L-209ENST00000397036 CMYA5Q8N3K9 4069 aa9.9□□□□□ -0.82
MCF2L-209ENST00000397036 C1orf196B1AJZ1 125 aa9.9□□□□□ -0.82
MCF2L-209ENST00000397036 UBE2CO00762 179 aa9.9□□□□□ -0.82
MCF2L-209ENST00000397036 NXPH4O95158 308 aa9.9□□□□□ -0.82
MCF2L-209ENST00000397036 FRMD6-AS1P0C7T7 363 aa9.9□□□□□ -0.82
MCF2L-209ENST00000397036 NTF3P20783 257 aa9.9□□□□□ -0.82
MCF2L-209ENST00000397036 PIK3CD-AS1Q5SR53 167 aa9.9□□□□□ -0.82
MCF2L-209ENST00000397036 ZNF705AQ6ZN79 300 aaPredicted RBP9.9□□□□□ -0.82
MCF2L-209ENST00000397036 TPPP3Q9BW30 176 aa9.9□□□□□ -0.82
MCF2L-209ENST00000397036 TRAPPC1Q9Y5R8 145 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms