RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 Q8TAT8 98 aa13.01□□□□□ -0.33
TNFSF13-205ENST00000396545 PGLYRP4Q96LB8 373 aa13.01□□□□□ -0.33
TNFSF13-205ENST00000396545 TM2D3Q9BRN9 247 aa13.01□□□□□ -0.33
TNFSF13-205ENST00000396545 PPP1R14DQ9NXH3 145 aa13.01□□□□□ -0.33
TNFSF13-205ENST00000396545 STARD9Q9P2P6 4700 aa13□□□□□ -0.33
TNFSF13-205ENST00000396545 GRIFINA4D1Z8 144 aa13□□□□□ -0.33
TNFSF13-205ENST00000396545 C2orf70A6NJV1 201 aa13□□□□□ -0.33
TNFSF13-205ENST00000396545 ESDP10768 282 aa13□□□□□ -0.33
TNFSF13-205ENST00000396545 Q8N1Y9 231 aa13□□□□□ -0.33
TNFSF13-205ENST00000396545 NDFIP1Q9BT67 221 aa13□□□□□ -0.33
TNFSF13-205ENST00000396545 IGHV4-30-4P0DP06 118 aa12.99□□□□□ -0.33
TNFSF13-205ENST00000396545 GZMBP10144 247 aa12.99□□□□□ -0.33
TNFSF13-205ENST00000396545 ERCC8Q13216 396 aa12.99□□□□□ -0.33
TNFSF13-205ENST00000396545 SLAQ13239 276 aa12.99□□□□□ -0.33
TNFSF13-205ENST00000396545 OR10J3Q5JRS4 329 aa12.99□□□□□ -0.33
TNFSF13-205ENST00000396545 Q6AWC8 147 aa12.99□□□□□ -0.33
TNFSF13-205ENST00000396545 C9orf47Q6ZRZ4 202 aa12.99□□□□□ -0.33
TNFSF13-205ENST00000396545 TMEM256Q8N2U0 113 aa12.99□□□□□ -0.33
TNFSF13-205ENST00000396545 OR9G4Q8NGQ1 327 aa12.99□□□□□ -0.33
TNFSF13-205ENST00000396545 C16orf92Q96LL3 132 aa12.99□□□□□ -0.33
TNFSF13-205ENST00000396545 PACRGQ96M98 296 aaPredicted RBP12.99□□□□□ -0.33
TNFSF13-205ENST00000396545 A8MZ25 164 aa12.98□□□□□ -0.33
TNFSF13-205ENST00000396545 LINC00310P59036 64 aa12.98□□□□□ -0.33
TNFSF13-205ENST00000396545 PYY3Q5JQD4 70 aa12.98□□□□□ -0.33
TNFSF13-205ENST00000396545 AGPAT4-IT1Q9H0P7 198 aa12.98□□□□□ -0.33
TNFSF13-205ENST00000396545 C19orf73Q9NVV2 129 aa12.98□□□□□ -0.33
TNFSF13-205ENST00000396545 ID1P41134 155 aa12.98□□□□□ -0.33
TNFSF13-205ENST00000396545 ZNF80P51504 273 aaPredicted RBP12.98□□□□□ -0.33
TNFSF13-205ENST00000396545 RPL11P62913 178 aaKnown RBP12.98□□□□□ -0.33
TNFSF13-205ENST00000396545 KIAA1644Q3SXP7 199 aa12.98□□□□□ -0.33
TNFSF13-205ENST00000396545 GATD1Q8NB37 220 aa12.98□□□□□ -0.33
TNFSF13-205ENST00000396545 TMEM18Q96B42 140 aa12.98□□□□□ -0.33
TNFSF13-205ENST00000396545 C20orf173Q96LM9 149 aa12.98□□□□□ -0.33
TNFSF13-205ENST00000396545 TMEM189A5PLL7 270 aa12.97□□□□□ -0.33
TNFSF13-205ENST00000396545 NUPR1O60356 82 aa12.97□□□□□ -0.33
TNFSF13-205ENST00000396545 ZNF138P52744 262 aa12.97□□□□□ -0.33
TNFSF13-205ENST00000396545 SIGLEC8Q9NYZ4 499 aa12.97□□□□□ -0.33
TNFSF13-205ENST00000396545 SRIP30626 198 aa12.96□□□□□ -0.33
TNFSF13-205ENST00000396545 CAMPP49913 170 aa12.96□□□□□ -0.33
TNFSF13-205ENST00000396545 RPS20P60866 119 aaKnown RBP12.96□□□□□ -0.33
TNFSF13-205ENST00000396545 EDA2RQ9HAV5 297 aa12.96□□□□□ -0.33
TNFSF13-205ENST00000396545 TRAV2A0A0B4J234 112 aa12.95□□□□□ -0.34
TNFSF13-205ENST00000396545 A0A1B0GUT8 65 aa12.95□□□□□ -0.34
TNFSF13-205ENST00000396545 A0A1B0GW15 77 aa12.95□□□□□ -0.34
TNFSF13-205ENST00000396545 PAFAH1B2P68402 229 aa12.95□□□□□ -0.34
TNFSF13-205ENST00000396545 DNLZQ5SXM8 178 aa12.95□□□□□ -0.34
TNFSF13-205ENST00000396545 TMEM78Q5T7P6 136 aa12.95□□□□□ -0.34
TNFSF13-205ENST00000396545 LENEPQ9Y5L5 61 aa12.95□□□□□ -0.34
TNFSF13-205ENST00000396545 LCE6AA0A183 80 aa12.94□□□□□ -0.34
TNFSF13-205ENST00000396545 FABP5P3A8MUU1 101 aa12.94□□□□□ -0.34
TNFSF13-205ENST00000396545 SERF1AO75920 110 aa12.94□□□□□ -0.34
TNFSF13-205ENST00000396545 RIGQ13278 110 aa12.94□□□□□ -0.34
TNFSF13-205ENST00000396545 F2Z2F3 143 aa12.94□□□□□ -0.34
TNFSF13-205ENST00000396545 ARMS2P0C7Q2 107 aa12.94□□□□□ -0.34
TNFSF13-205ENST00000396545 LINC01559Q495D7 138 aa12.94□□□□□ -0.34
TNFSF13-205ENST00000396545 ZNF575Q86XF7 245 aa12.94□□□□□ -0.34
TNFSF13-205ENST00000396545 ZNF738Q8NE65 137 aa12.94□□□□□ -0.34
TNFSF13-205ENST00000396545 ALKBH7Q9BT30 221 aaPredicted RBP12.94□□□□□ -0.34
TNFSF13-205ENST00000396545 SSBP4Q9BWG4 385 aaPredicted RBP12.94□□□□□ -0.34
TNFSF13-205ENST00000396545 DNAH1Q9P2D7 4330 aa12.93□□□□□ -0.34
TNFSF13-205ENST00000396545 EPPK1P58107 5090 aaKnown RBP12.93□□□□□ -0.34
TNFSF13-205ENST00000396545 CSN3P07498 182 aa12.93□□□□□ -0.34
TNFSF13-205ENST00000396545 EDN2P20800 178 aa12.93□□□□□ -0.34
TNFSF13-205ENST00000396545 ZFAND6Q6FIF0 208 aa12.93□□□□□ -0.34
TNFSF13-205ENST00000396545 BAGE3Q86Y29 109 aa12.93□□□□□ -0.34
TNFSF13-205ENST00000396545 DCANP1Q8TF63 244 aa12.93□□□□□ -0.34
TNFSF13-205ENST00000396545 NIT2Q9NQR4 276 aa12.93□□□□□ -0.34
TNFSF13-205ENST00000396545 TRAV25A0A0B4J276 109 aa12.92□□□□□ -0.34
TNFSF13-205ENST00000396545 IGLC6P0CF74 106 aa12.92□□□□□ -0.34
TNFSF13-205ENST00000396545 CTRLP40313 264 aa12.92□□□□□ -0.34
TNFSF13-205ENST00000396545 SNRPD3P62318 126 aaKnown RBP12.92□□□□□ -0.34
TNFSF13-205ENST00000396545 HIST1H1AQ02539 215 aaPredicted RBP12.92□□□□□ -0.34
TNFSF13-205ENST00000396545 JOSD1Q15040 202 aaPredicted RBP12.92□□□□□ -0.34
TNFSF13-205ENST00000396545 C18orf32Q8TCD1 76 aa12.92□□□□□ -0.34
TNFSF13-205ENST00000396545 DYNLRB2Q8TF09 96 aa12.92□□□□□ -0.34
TNFSF13-205ENST00000396545 LINC00477Q96M19 166 aa12.92□□□□□ -0.34
TNFSF13-205ENST00000396545 MS4A6AQ9H2W1 248 aa12.92□□□□□ -0.34
TNFSF13-205ENST00000396545 ADAMTSL5Q6ZMM2 481 aa12.91□□□□□ -0.34
TNFSF13-205ENST00000396545 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
TNFSF13-205ENST00000396545 K7EQG2 157 aa12.9□□□□□ -0.34
TNFSF13-205ENST00000396545 LYZL1Q6UWQ5 148 aa12.9□□□□□ -0.34
TNFSF13-205ENST00000396545 BORCS7Q96B45 105 aa12.9□□□□□ -0.34
TNFSF13-205ENST00000396545 TMSB15BA0A087X1C1 80 aa12.9□□□□□ -0.35
TNFSF13-205ENST00000396545 LOC102724200A0A096LPH7 203 aaPredicted RBP12.9□□□□□ -0.35
TNFSF13-205ENST00000396545 ZNF493Q6ZR52 646 aa12.9□□□□□ -0.35
TNFSF13-205ENST00000396545 OR10J6PQ8NGY7 276 aa12.9□□□□□ -0.35
TNFSF13-205ENST00000396545 FAM19A4Q96LR4 140 aa12.9□□□□□ -0.35
TNFSF13-205ENST00000396545 TRBV7-9A0A0J9YWB2 115 aa12.89□□□□□ -0.35
TNFSF13-205ENST00000396545 DEFB114Q30KQ6 69 aa12.89□□□□□ -0.35
TNFSF13-205ENST00000396545 GTSCR1Q86UQ5 136 aa12.89□□□□□ -0.35
TNFSF13-205ENST00000396545 FER1L6-AS1Q8NA97 138 aa12.89□□□□□ -0.35
TNFSF13-205ENST00000396545 KCNS1Q96KK3 526 aa12.89□□□□□ -0.35
TNFSF13-205ENST00000396545 IGKV3-7A0A075B6H7 116 aa12.88□□□□□ -0.35
TNFSF13-205ENST00000396545 ORM1P02763 201 aa12.88□□□□□ -0.35
TNFSF13-205ENST00000396545 S100A12P80511 92 aa12.88□□□□□ -0.35
TNFSF13-205ENST00000396545 CDPF1Q6NVV7 123 aa12.88□□□□□ -0.35
TNFSF13-205ENST00000396545 SPAG8Q99932 426 aaPredicted RBP12.88□□□□□ -0.35
TNFSF13-205ENST00000396545 CNFNQ9BYD5 112 aa12.88□□□□□ -0.35
TNFSF13-205ENST00000396545 IGKV3D-20A0A0C4DH25 116 aa12.87□□□□□ -0.35
TNFSF13-205ENST00000396545 ZNF705DP0CH99 300 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms