RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 IMMP2LQ96T52 175 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 SMCO4Q9NRQ5 59 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 RABAC1Q9UI14 185 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 LINC00312Q9Y6C7 94 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 LY96Q9Y6Y9 160 aa2.55□□□□□ -2
HMGB1P10-201ENST00000395823 LAMA2P24043 3122 aaKnown RBP2.55□□□□□ -2
HMGB1P10-201ENST00000395823 KIAA1551Q9HCM1 1747 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 MUC3AQ02505 3323 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 ABCA9Q8IUA7 1624 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 EYSQ5T1H1 3165 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 ABCC3O15438 1527 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 IGHV3-15A0A0B4J1V0 119 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 H3BPC8 53 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 NDUFB6O95139 128 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 COX7CP15954 63 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 SS18Q15532 418 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 FAM74A1Q5RGS3 127 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 LINC00471Q8N535 108 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 CCL4L1Q8NHW4 92 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 VSTM2AQ8TAG5 236 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 MUC7Q8TAX7 377 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 C10orf82Q8WW14 230 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 S100ZQ8WXG8 99 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 CLEC2BQ92478 149 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 SPTSSAQ969W0 71 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 TRIOBPQ9H2D6 2365 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 RALGAPA2Q2PPJ7 1873 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 CDK5RAP2Q96SN8 1893 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 AKAP12Q02952 1782 aa2.54□□□□□ -2
HMGB1P10-201ENST00000395823 TMEM131LA2VDJ0 1609 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 ATP7AQ04656 1500 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 SCAPERQ9BY12 1400 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 ANKRD11Q6UB99 2663 aaPredicted RBP2.53□□□□□ -2
HMGB1P10-201ENST00000395823 IGHV1-24A0A0C4DH33 117 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 UBE2L5PA0A1B0GUS4 154 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 ZNF705FA8MVS1 300 aaPredicted RBP2.53□□□□□ -2
HMGB1P10-201ENST00000395823 J3QLW9 94 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 APOC3P02656 99 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 IL5P05113 134 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 RPL28P46779 137 aaKnown RBP2.53□□□□□ -2
HMGB1P10-201ENST00000395823 SUPT4H1P63272 117 aaKnown RBP2.53□□□□□ -2
HMGB1P10-201ENST00000395823 UBE2L3P68036 154 aaKnown RBP2.53□□□□□ -2
HMGB1P10-201ENST00000395823 ZNF117Q03924 483 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 MIC13Q5XKP0 118 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 LYZL1Q6UWQ5 148 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 C15orf53Q8NAA6 179 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 Q96M85 177 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 LINC00052Q96N35 136 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 NPVFQ9HCQ7 196 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 UQCR10Q9UDW1 63 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 ZNF462Q96JM2 2506 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 ABCA3Q99758 1704 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 KDM5AP29375 1690 aaKnown RBP2.53□□□□□ -2
HMGB1P10-201ENST00000395823 SDK2Q58EX2 2172 aa2.53□□□□□ -2
HMGB1P10-201ENST00000395823 CFAP74Q9C0B2 1584 aa2.53□□□□□ -2.01
HMGB1P10-201ENST00000395823 EEA1Q15075 1411 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 BDP1A6H8Y1 2624 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 MUC21A0A0G2JKD1 596 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 TRBV10-2A0A0K0K1G8 114 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 C19orf71A6NCJ1 209 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 K7EP34 96 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 PDCD5O14737 125 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 ZNF737O75373 536 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 CYB5AP00167 134 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 MT-ATP8P03928 68 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 DEFA5Q01523 94 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 AQP3Q92482 292 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 LSM10Q969L4 123 aaKnown RBP2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 RETNLBQ9BQ08 111 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 NABP2Q9BQ15 211 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 SMIM7Q9BQ49 75 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 COL4A4P53420 1690 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 DIP2CQ9Y2E4 1556 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 DISP1Q96F81 1524 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 CCDC88BA6NC98 1476 aa2.52□□□□□ -2.01
HMGB1P10-201ENST00000395823 UBR2Q8IWV8 1755 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 CROCC2H7BZ55 1655 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 ZC3H13Q5T200 1668 aaKnown RBP2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 SHROOM3Q8TF72 1996 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 MYH7P12883 1935 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 TRAV7A0A075B6U4 112 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 E7EQL1 145 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 H7C2G1 150 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 KRTDAPP60985 99 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 FOXF1Q12946 379 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 ESRGQ1W209 222 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 PYDC2Q56P42 97 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 C2orf91Q6ZV80 131 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 TVP23CQ96ET8 276 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 MGST2Q99735 147 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 SLC50A1Q9BRV3 221 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 CST11Q9H112 138 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 DPH3P1Q9H4G8 78 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 FER1L6Q2WGJ9 1857 aa2.51□□□□□ -2.01
HMGB1P10-201ENST00000395823 CFAP47Q6ZTR5 3102 aa2.5□□□□□ -2.01
HMGB1P10-201ENST00000395823 DSCAML1Q8TD84 2053 aa2.5□□□□□ -2.01
HMGB1P10-201ENST00000395823 IGLV3-9A0A075B6K5 115 aa2.5□□□□□ -2.01
HMGB1P10-201ENST00000395823 hDV103S1A0JD37 113 aa2.5□□□□□ -2.01
HMGB1P10-201ENST00000395823 GNGT2O14610 69 aa2.5□□□□□ -2.01
HMGB1P10-201ENST00000395823 GNRH2O43555 120 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms