RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 GNG5P63218 68 aa13□□□□□ -0.33
COL11A2-204ENST00000395194 HAMPP81172 84 aa13□□□□□ -0.33
COL11A2-204ENST00000395194 IFITM3Q01628 133 aa13□□□□□ -0.33
COL11A2-204ENST00000395194 NHLRC2Q8NBF2 726 aa13□□□□□ -0.33
COL11A2-204ENST00000395194 MBD2Q9UBB5 411 aa13□□□□□ -0.33
COL11A2-204ENST00000395194 M0R2P5 195 aa12.99□□□□□ -0.33
COL11A2-204ENST00000395194 HMGB3O15347 200 aaKnown RBP12.99□□□□□ -0.33
COL11A2-204ENST00000395194 MPC2O95563 127 aa12.99□□□□□ -0.33
COL11A2-204ENST00000395194 TVP23CQ96ET8 276 aa12.99□□□□□ -0.33
COL11A2-204ENST00000395194 SGK494Q96LW2 274 aa12.99□□□□□ -0.33
COL11A2-204ENST00000395194 SSNA1O43805 119 aa12.98□□□□□ -0.33
COL11A2-204ENST00000395194 SMR3BP02814 79 aaPredicted RBP12.98□□□□□ -0.33
COL11A2-204ENST00000395194 RPL12P30050 165 aaKnown RBP12.98□□□□□ -0.33
COL11A2-204ENST00000395194 RAB2AP61019 212 aa12.98□□□□□ -0.33
COL11A2-204ENST00000395194 TDRG1Q3Y452 100 aa12.98□□□□□ -0.33
COL11A2-204ENST00000395194 TMED6Q8WW62 240 aa12.98□□□□□ -0.33
COL11A2-204ENST00000395194 WFDC1Q9HC57 220 aa12.98□□□□□ -0.33
COL11A2-204ENST00000395194 MYCBP2O75592 4640 aa12.98□□□□□ -0.33
COL11A2-204ENST00000395194 TRAV21A0A0B4J279 112 aa12.97□□□□□ -0.33
COL11A2-204ENST00000395194 PPT1P50897 306 aa12.97□□□□□ -0.33
COL11A2-204ENST00000395194 FAM74A1Q5RGS3 127 aa12.97□□□□□ -0.33
COL11A2-204ENST00000395194 FRZBQ92765 325 aa12.97□□□□□ -0.33
COL11A2-204ENST00000395194 TREM1Q9NP99 234 aa12.97□□□□□ -0.33
COL11A2-204ENST00000395194 PET100P0DJ07 73 aa12.96□□□□□ -0.33
COL11A2-204ENST00000395194 GCSHP23434 173 aa12.96□□□□□ -0.33
COL11A2-204ENST00000395194 LINC00299Q6ZSB3 139 aa12.96□□□□□ -0.33
COL11A2-204ENST00000395194 C10orf126Q8N4M7 172 aa12.96□□□□□ -0.33
COL11A2-204ENST00000395194 SDF2L1Q9HCN8 221 aa12.96□□□□□ -0.33
COL11A2-204ENST00000395194 BATF3Q9NR55 127 aa12.96□□□□□ -0.33
COL11A2-204ENST00000395194 A0A1W2PPV4 95 aa12.95□□□□□ -0.34
COL11A2-204ENST00000395194 PSCAO43653 123 aa12.95□□□□□ -0.34
COL11A2-204ENST00000395194 GATA1P15976 413 aaPredicted RBP12.95□□□□□ -0.34
COL11A2-204ENST00000395194 ACOT6Q3I5F7 207 aaPredicted RBP12.95□□□□□ -0.34
COL11A2-204ENST00000395194 DNAH8Q96JB1 4490 aa12.94□□□□□ -0.34
COL11A2-204ENST00000395194 IGHV3-73A0A0B4J1V6 119 aa12.94□□□□□ -0.34
COL11A2-204ENST00000395194 IGHV3-38A0A0C4DH36 116 aa12.94□□□□□ -0.34
COL11A2-204ENST00000395194 K7EP13 123 aa12.94□□□□□ -0.34
COL11A2-204ENST00000395194 PQLC2Q6ZP29 291 aa12.94□□□□□ -0.34
COL11A2-204ENST00000395194 ASB13Q8WXK3 278 aa12.94□□□□□ -0.34
COL11A2-204ENST00000395194 MARVELD1Q9BSK0 173 aa12.94□□□□□ -0.34
COL11A2-204ENST00000395194 Q9HAA7 133 aa12.94□□□□□ -0.34
COL11A2-204ENST00000395194 FBLL1A6NHQ2 334 aaKnown RBP12.93□□□□□ -0.34
COL11A2-204ENST00000395194 KCNS1Q96KK3 526 aa12.93□□□□□ -0.34
COL11A2-204ENST00000395194 SRRM2Q9UQ35 2752 aaKnown RBP12.92□□□□□ -0.34
COL11A2-204ENST00000395194 IGLV5-52A0A0A0MRZ9 124 aa12.92□□□□□ -0.34
COL11A2-204ENST00000395194 ARL14EPLP0DKL9 152 aa12.92□□□□□ -0.34
COL11A2-204ENST00000395194 ZNF80P51504 273 aaPredicted RBP12.92□□□□□ -0.34
COL11A2-204ENST00000395194 OR10J3Q5JRS4 329 aa12.92□□□□□ -0.34
COL11A2-204ENST00000395194 DPPA3Q6W0C5 159 aa12.92□□□□□ -0.34
COL11A2-204ENST00000395194 SLC25A29Q8N8R3 303 aa12.92□□□□□ -0.34
COL11A2-204ENST00000395194 TMEM75Q8N9X5 138 aa12.92□□□□□ -0.34
COL11A2-204ENST00000395194 OR10G9Q8NGN4 311 aa12.92□□□□□ -0.34
COL11A2-204ENST00000395194 OR10G7Q8NGN6 311 aa12.92□□□□□ -0.34
COL11A2-204ENST00000395194 C11orf21Q9P2W6 132 aa12.92□□□□□ -0.34
COL11A2-204ENST00000395194 IGHV3-30P01768 117 aa12.91□□□□□ -0.34
COL11A2-204ENST00000395194 IGHV3-33P01772 117 aa12.91□□□□□ -0.34
COL11A2-204ENST00000395194 IGHV3-30-3P0DP02 117 aa12.91□□□□□ -0.34
COL11A2-204ENST00000395194 IGHV3-30-5P0DP03 117 aa12.91□□□□□ -0.34
COL11A2-204ENST00000395194 ZNF876PQ49A33 203 aa12.91□□□□□ -0.34
COL11A2-204ENST00000395194 SH2D6Q7Z4S9 175 aa12.91□□□□□ -0.34
COL11A2-204ENST00000395194 LRCOL1A6NCL2 159 aa12.9□□□□□ -0.34
COL11A2-204ENST00000395194 LINC01556Q5JQF7 62 aa12.9□□□□□ -0.34
COL11A2-204ENST00000395194 CFAP126Q5VTH2 177 aa12.9□□□□□ -0.34
COL11A2-204ENST00000395194 NDFIP1Q9BT67 221 aa12.9□□□□□ -0.34
COL11A2-204ENST00000395194 TRAV8-6A0A0B4J262 113 aa12.89□□□□□ -0.35
COL11A2-204ENST00000395194 RS1O15537 224 aa12.89□□□□□ -0.35
COL11A2-204ENST00000395194 GCGP01275 180 aa12.89□□□□□ -0.35
COL11A2-204ENST00000395194 CDC34P49427 236 aaPredicted RBP12.89□□□□□ -0.35
COL11A2-204ENST00000395194 TIRAPP58753 221 aa12.89□□□□□ -0.35
COL11A2-204ENST00000395194 HSD17B11Q8NBQ5 300 aa12.89□□□□□ -0.35
COL11A2-204ENST00000395194 PRADC1Q9BSG0 188 aa12.89□□□□□ -0.35
COL11A2-204ENST00000395194 IBA57-AS1B1ANH7 110 aa12.88□□□□□ -0.35
COL11A2-204ENST00000395194 PFN1P07737 140 aaKnown RBP12.88□□□□□ -0.35
COL11A2-204ENST00000395194 RHOHQ15669 191 aa12.88□□□□□ -0.35
COL11A2-204ENST00000395194 ARL6IP6Q8N6S5 226 aa12.88□□□□□ -0.35
COL11A2-204ENST00000395194 TCRAP04437 139 aa12.87□□□□□ -0.35
COL11A2-204ENST00000395194 ZNF506Q5JVG8 444 aa12.87□□□□□ -0.35
COL11A2-204ENST00000395194 Q8N3U1 123 aa12.87□□□□□ -0.35
COL11A2-204ENST00000395194 C5orf17Q8NAS9 161 aa12.87□□□□□ -0.35
COL11A2-204ENST00000395194 PSG8Q9UQ74 426 aa12.87□□□□□ -0.35
COL11A2-204ENST00000395194 PGPEP1LA6NFU8 196 aa12.86□□□□□ -0.35
COL11A2-204ENST00000395194 STAG3L2P0CL84 134 aa12.86□□□□□ -0.35
COL11A2-204ENST00000395194 STAG3L3P0CL85 134 aa12.86□□□□□ -0.35
COL11A2-204ENST00000395194 DEFA1P59665 94 aa12.86□□□□□ -0.35
COL11A2-204ENST00000395194 DEFA3P59666 94 aa12.86□□□□□ -0.35
COL11A2-204ENST00000395194 PRNTQ86SH4 94 aa12.86□□□□□ -0.35
COL11A2-204ENST00000395194 Q8N814 137 aa12.86□□□□□ -0.35
COL11A2-204ENST00000395194 C9orf85Q96MD7 179 aa12.86□□□□□ -0.35
COL11A2-204ENST00000395194 TRBV6-4A0A1B0GX49 114 aa12.85□□□□□ -0.35
COL11A2-204ENST00000395194 TAAR5O14804 337 aa12.85□□□□□ -0.35
COL11A2-204ENST00000395194 GCHFRP30047 84 aa12.85□□□□□ -0.35
COL11A2-204ENST00000395194 LELP1Q5T871 98 aa12.85□□□□□ -0.35
COL11A2-204ENST00000395194 NTN5Q8WTR8 489 aaPredicted RBP12.85□□□□□ -0.35
COL11A2-204ENST00000395194 RAB24Q969Q5 203 aa12.85□□□□□ -0.35
COL11A2-204ENST00000395194 SERTM2A0A1B0GWG4 89 aa12.84□□□□□ -0.35
COL11A2-204ENST00000395194 FAM229AH3BQW9 127 aa12.84□□□□□ -0.35
COL11A2-204ENST00000395194 K7EQM0 130 aa12.84□□□□□ -0.35
COL11A2-204ENST00000395194 SUMO1P63165 101 aaKnown RBP12.84□□□□□ -0.35
COL11A2-204ENST00000395194 FLI1Q01543 452 aaPredicted RBP12.84□□□□□ -0.35
COL11A2-204ENST00000395194 ZFP69Q49AA0 526 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms