RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 MT-ND4LP03901 98 aa6.17□□□□□ -1.42
HERC4-203ENST00000395185 PFN1P07737 140 aaKnown RBP6.17□□□□□ -1.42
HERC4-203ENST00000395185 TSPOP30536 169 aa6.17□□□□□ -1.42
HERC4-203ENST00000395185 LEPP41159 167 aa6.17□□□□□ -1.42
HERC4-203ENST00000395185 CDKN1BP46527 198 aa6.17□□□□□ -1.42
HERC4-203ENST00000395185 RNF212Q495C1 297 aa6.17□□□□□ -1.42
HERC4-203ENST00000395185 FAM162BQ5T6X4 162 aa6.17□□□□□ -1.42
HERC4-203ENST00000395185 MORN3Q6PF18 240 aaPredicted RBP6.17□□□□□ -1.42
HERC4-203ENST00000395185 OR4B1Q8NGF8 309 aa6.17□□□□□ -1.42
HERC4-203ENST00000395185 ANAPC16Q96DE5 110 aa6.17□□□□□ -1.42
HERC4-203ENST00000395185 YPEL4Q96NS1 127 aa6.17□□□□□ -1.42
HERC4-203ENST00000395185 IMMP2LQ96T52 175 aa6.17□□□□□ -1.42
HERC4-203ENST00000395185 NDFIP1Q9BT67 221 aa6.17□□□□□ -1.42
HERC4-203ENST00000395185 DNAH9Q9NYC9 4486 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 NBEAL2Q6ZNJ1 2754 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 IGKV3D-20A0A0C4DH25 116 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 FAM231BA6NCW3 169 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 M0R036 132 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 PPP1R2P9O14990 202 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 SH2D1AO60880 128 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 AMBPP02760 352 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 TDRG1Q3Y452 100 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 DNLZQ5SXM8 178 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 Q6ZQT7 251 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 CSNK1G2-AS1Q8NCQ2 148 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 OVOL2Q9BRP0 275 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 PYGO2Q9BRQ0 406 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 LINC00467Q9BRT7 94 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 RNASE7Q9H1E1 156 aaKnown RBP6.16□□□□□ -1.42
HERC4-203ENST00000395185 TP53TG3Q9ULZ0 132 aa6.16□□□□□ -1.42
HERC4-203ENST00000395185 TRAV21A0A0B4J279 112 aa6.15□□□□□ -1.42
HERC4-203ENST00000395185 SMIM27A0A1W2PRY6 76 aa6.15□□□□□ -1.42
HERC4-203ENST00000395185 C7orf71A4D174 169 aa6.15□□□□□ -1.42
HERC4-203ENST00000395185 GPX1P07203 203 aa6.15□□□□□ -1.42
HERC4-203ENST00000395185 CXCL1P09341 107 aa6.15□□□□□ -1.42
HERC4-203ENST00000395185 RBMY1A1P0DJD3 496 aaKnown RBP6.15□□□□□ -1.42
HERC4-203ENST00000395185 RBMY1CP0DJD4 496 aa6.15□□□□□ -1.42
HERC4-203ENST00000395185 MGST1P10620 155 aaKnown RBP6.15□□□□□ -1.42
HERC4-203ENST00000395185 ERVFC1-1P60608 527 aa6.15□□□□□ -1.42
HERC4-203ENST00000395185 RBMY1FQ15415 496 aaKnown RBP6.15□□□□□ -1.42
HERC4-203ENST00000395185 IBA57Q5T440 356 aaKnown RBP6.15□□□□□ -1.42
HERC4-203ENST00000395185 GFI1BQ5VTD9 330 aa6.15□□□□□ -1.42
HERC4-203ENST00000395185 RNF183Q96D59 192 aa6.15□□□□□ -1.42
HERC4-203ENST00000395185 C20orf144Q9BQM9 153 aa6.15□□□□□ -1.42
HERC4-203ENST00000395185 C1QTNF4Q9BXJ3 329 aa6.15□□□□□ -1.42
HERC4-203ENST00000395185 RETNQ9HD89 108 aa6.15□□□□□ -1.42
HERC4-203ENST00000395185 TGP01266 2768 aa6.15□□□□□ -1.43
HERC4-203ENST00000395185 H7BYZ3 331 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 M0R2Z0 102 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 GATCO43716 136 aaKnown RBP6.14□□□□□ -1.43
HERC4-203ENST00000395185 CA1P00915 261 aaPredicted RBP6.14□□□□□ -1.43
HERC4-203ENST00000395185 IGKV3-20P01619 116 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 P01737 135 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 RNASE4P34096 147 aaKnown RBP6.14□□□□□ -1.43
HERC4-203ENST00000395185 BTN1A1Q13410 526 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 SPINK13Q1W4C9 94 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 DEFB135Q30KP9 77 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 C1orf158Q8N1D5 194 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 C15orf54Q8N8G6 183 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 TSKUQ8WUA8 353 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 GTSF1Q8WW33 167 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 GFRA4Q9GZZ7 299 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 RPP21Q9H633 154 aaKnown RBP6.14□□□□□ -1.43
HERC4-203ENST00000395185 EDA2RQ9HAV5 297 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 RPS10P5Q9NQ39 176 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 IL36BQ9NZH7 164 aa6.14□□□□□ -1.43
HERC4-203ENST00000395185 ZNF705GA8MUZ8 300 aaPredicted RBP6.13□□□□□ -1.43
HERC4-203ENST00000395185 A8MWL6 223 aa6.13□□□□□ -1.43
HERC4-203ENST00000395185 SCO1O75880 301 aa6.13□□□□□ -1.43
HERC4-203ENST00000395185 IGLC6P0CF74 106 aa6.13□□□□□ -1.43
HERC4-203ENST00000395185 RPS20P60866 119 aaKnown RBP6.13□□□□□ -1.43
HERC4-203ENST00000395185 PRR27Q6MZM9 219 aa6.13□□□□□ -1.43
HERC4-203ENST00000395185 ZNF705AQ6ZN79 300 aaPredicted RBP6.13□□□□□ -1.43
HERC4-203ENST00000395185 OR11H2Q8NH07 326 aa6.13□□□□□ -1.43
HERC4-203ENST00000395185 DAZAP1Q96EP5 407 aaKnown RBP6.13□□□□□ -1.43
HERC4-203ENST00000395185 CNFNQ9BYD5 112 aa6.13□□□□□ -1.43
HERC4-203ENST00000395185 SCRT2Q9NQ03 307 aa6.13□□□□□ -1.43
HERC4-203ENST00000395185 SMCO4Q9NRQ5 59 aa6.13□□□□□ -1.43
HERC4-203ENST00000395185 TRBV24-1A0A075B6N3 115 aa6.12□□□□□ -1.43
HERC4-203ENST00000395185 TRAV12-2A0A075B6T6 113 aa6.12□□□□□ -1.43
HERC4-203ENST00000395185 TRAV9-1A0A075B6T8 112 aa6.12□□□□□ -1.43
HERC4-203ENST00000395185 TRAV12-3A0A0B4J271 114 aa6.12□□□□□ -1.43
HERC4-203ENST00000395185 TMEM189A5PLL7 270 aa6.12□□□□□ -1.43
HERC4-203ENST00000395185 COLCA2A8K830 154 aa6.12□□□□□ -1.43
HERC4-203ENST00000395185 RPL19P84098 196 aaKnown RBP6.12□□□□□ -1.43
HERC4-203ENST00000395185 ANXA2RQ3ZCQ2 193 aa6.12□□□□□ -1.43
HERC4-203ENST00000395185 CASC10Q5T4H9 136 aa6.12□□□□□ -1.43
HERC4-203ENST00000395185 ZFAND6Q6FIF0 208 aa6.12□□□□□ -1.43
HERC4-203ENST00000395185 WDR73Q6P4I2 378 aa6.12□□□□□ -1.43
HERC4-203ENST00000395185 OR2D3Q8NGH3 330 aa6.12□□□□□ -1.43
HERC4-203ENST00000395185 IGHV4-4A0A075B6R2 117 aa6.11□□□□□ -1.43
HERC4-203ENST00000395185 IGHV1OR15-1A0A075B7D0 117 aa6.11□□□□□ -1.43
HERC4-203ENST00000395185 A0A0J9YWU9 116 aa6.11□□□□□ -1.43
HERC4-203ENST00000395185 SNAI2O43623 268 aa6.11□□□□□ -1.43
HERC4-203ENST00000395185 ORM1P02763 201 aa6.11□□□□□ -1.43
HERC4-203ENST00000395185 OR5AL1P0C617 328 aa6.11□□□□□ -1.43
HERC4-203ENST00000395185 MED14OSP0DP75 135 aa6.11□□□□□ -1.43
HERC4-203ENST00000395185 RNASE3P12724 160 aaKnown RBP6.11□□□□□ -1.43
HERC4-203ENST00000395185 FXYD7P58549 80 aa6.11□□□□□ -1.43
HERC4-203ENST00000395185 ELOBQ15370 118 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms