RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 ZNF492Q9P255 531 aa7.96□□□□□ -1.14
HIF1A-203ENST00000394997 CMYA5Q8N3K9 4069 aa7.96□□□□□ -1.14
HIF1A-203ENST00000394997 FXYD2P54710 66 aa7.96□□□□□ -1.14
HIF1A-203ENST00000394997 SHANK2-AS3Q9BTD1 123 aa7.96□□□□□ -1.14
HIF1A-203ENST00000394997 ZFAND3Q9H8U3 227 aa7.96□□□□□ -1.14
HIF1A-203ENST00000394997 CHTOPQ9Y3Y2 248 aaKnown RBP7.96□□□□□ -1.14
HIF1A-203ENST00000394997 A0A096LNT2 108 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 IGHV3-23P01764 117 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 FAM106CPP0CH98 169 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 FAM106AQ4KMX7 169 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 SPANXN1Q5VSR9 72 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 NBR2O15453 112 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 CRIP2P52943 208 aaPredicted RBP7.95□□□□□ -1.14
HIF1A-203ENST00000394997 RPS20P60866 119 aaKnown RBP7.95□□□□□ -1.14
HIF1A-203ENST00000394997 IGFL4Q6B9Z1 124 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 SYT8Q8NBV8 401 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 Q8TAT8 98 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 VGLL1Q99990 258 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 TEP1Q99973 2627 aaKnown RBP7.95□□□□□ -1.14
HIF1A-203ENST00000394997 ITPR3Q14573 2671 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 TRBV19A0A075B6N1 114 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 C5orf64Q2M2E5 130 aa7.95□□□□□ -1.14
HIF1A-203ENST00000394997 IGKV3-7A0A075B6H7 116 aa7.94□□□□□ -1.14
HIF1A-203ENST00000394997 IGKCP01834 107 aa7.94□□□□□ -1.14
HIF1A-203ENST00000394997 MGPP08493 103 aa7.94□□□□□ -1.14
HIF1A-203ENST00000394997 GNLYP22749 145 aa7.94□□□□□ -1.14
HIF1A-203ENST00000394997 LOXL1Q08397 574 aaPredicted RBP7.94□□□□□ -1.14
HIF1A-203ENST00000394997 Q86TA4 180 aa7.94□□□□□ -1.14
HIF1A-203ENST00000394997 NEU4Q8WWR8 484 aaPredicted RBP7.94□□□□□ -1.14
HIF1A-203ENST00000394997 SIGLEC8Q9NYZ4 499 aa7.94□□□□□ -1.14
HIF1A-203ENST00000394997 CT83Q5H943 113 aa7.94□□□□□ -1.14
HIF1A-203ENST00000394997 IGHV3-49A0A0A0MS15 119 aa7.94□□□□□ -1.14
HIF1A-203ENST00000394997 LINC01548A6NM66 108 aa7.94□□□□□ -1.14
HIF1A-203ENST00000394997 TTC32Q5I0X7 151 aa7.94□□□□□ -1.14
HIF1A-203ENST00000394997 TRAV40A0A0B4J280 105 aa7.93□□□□□ -1.14
HIF1A-203ENST00000394997 CTSGP08311 255 aa7.93□□□□□ -1.14
HIF1A-203ENST00000394997 KLF17Q5JT82 389 aaPredicted RBP7.93□□□□□ -1.14
HIF1A-203ENST00000394997 LINC01545Q5VT33 79 aa7.93□□□□□ -1.14
HIF1A-203ENST00000394997 ZNF562Q6V9R5 426 aa7.93□□□□□ -1.14
HIF1A-203ENST00000394997 DPM3Q9P2X0 92 aa7.93□□□□□ -1.14
HIF1A-203ENST00000394997 IGKV2-40A0A087WW87 121 aaPredicted RBP7.93□□□□□ -1.14
HIF1A-203ENST00000394997 DPM2O94777 84 aa7.93□□□□□ -1.14
HIF1A-203ENST00000394997 IGKV2D-40P01614 121 aaPredicted RBP7.93□□□□□ -1.14
HIF1A-203ENST00000394997 SS18L2Q9UHA2 77 aa7.93□□□□□ -1.14
HIF1A-203ENST00000394997 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.93□□□□□ -1.14
HIF1A-203ENST00000394997 CRYBA4P53673 196 aa7.93□□□□□ -1.14
HIF1A-203ENST00000394997 OTORQ9NRC9 128 aa7.93□□□□□ -1.14
HIF1A-203ENST00000394997 USP24Q9UPU5 2620 aa7.92□□□□□ -1.14
HIF1A-203ENST00000394997 IGHV3-66A0A0C4DH42 116 aa7.92□□□□□ -1.14
HIF1A-203ENST00000394997 PGPEP1Q9NXJ5 209 aa7.92□□□□□ -1.14
HIF1A-203ENST00000394997 F5H697 171 aa7.92□□□□□ -1.14
HIF1A-203ENST00000394997 CCDC140Q96MF4 163 aa7.92□□□□□ -1.14
HIF1A-203ENST00000394997 TRAV8-2A0A0B4J237 113 aa7.92□□□□□ -1.14
HIF1A-203ENST00000394997 KHDC1LQ5JSQ8 128 aa7.92□□□□□ -1.14
HIF1A-203ENST00000394997 LYRM7Q5U5X0 104 aa7.92□□□□□ -1.14
HIF1A-203ENST00000394997 TMEM75Q8N9X5 138 aa7.92□□□□□ -1.14
HIF1A-203ENST00000394997 TMEM158Q8WZ71 300 aa7.92□□□□□ -1.14
HIF1A-203ENST00000394997 MAP1AP78559 2803 aaPredicted RBP7.92□□□□□ -1.14
HIF1A-203ENST00000394997 TMEM238LA0A1B0GVL6 79 aa7.91□□□□□ -1.14
HIF1A-203ENST00000394997 A6NJY4 79 aa7.91□□□□□ -1.14
HIF1A-203ENST00000394997 DPF1Q92782 380 aa7.91□□□□□ -1.14
HIF1A-203ENST00000394997 C8orf49Q96NF6 230 aa7.91□□□□□ -1.14
HIF1A-203ENST00000394997 F8P00451 2351 aa7.91□□□□□ -1.14
HIF1A-203ENST00000394997 NPYP01303 97 aa7.91□□□□□ -1.14
HIF1A-203ENST00000394997 TEX29Q8N6K0 151 aa7.91□□□□□ -1.14
HIF1A-203ENST00000394997 ONECUT1Q9UBC0 465 aa7.91□□□□□ -1.14
HIF1A-203ENST00000394997 U3KQE9 123 aa7.91□□□□□ -1.14
HIF1A-203ENST00000394997 TMEM8BA6NDV4 472 aa7.91□□□□□ -1.14
HIF1A-203ENST00000394997 HOXA3O43365 443 aaPredicted RBP7.91□□□□□ -1.14
HIF1A-203ENST00000394997 SRSF1Q07955 248 aaKnown RBP eCLIP7.91□□□□□ -1.14
HIF1A-203ENST00000394997 GFRA4Q9GZZ7 299 aa7.91□□□□□ -1.14
HIF1A-203ENST00000394997 IGHV4-39P01824 125 aa7.9□□□□□ -1.14
HIF1A-203ENST00000394997 MINOS1Q5TGZ0 78 aa7.9□□□□□ -1.14
HIF1A-203ENST00000394997 MINOS1-NBL1R4GNA1 71 aa7.9□□□□□ -1.14
HIF1A-203ENST00000394997 CRXO43186 299 aaPredicted RBP7.9□□□□□ -1.14
HIF1A-203ENST00000394997 SNCGO76070 127 aa7.9□□□□□ -1.14
HIF1A-203ENST00000394997 SMIM17P0DL12 118 aa7.9□□□□□ -1.14
HIF1A-203ENST00000394997 EMP1P54849 157 aa7.9□□□□□ -1.14
HIF1A-203ENST00000394997 C2orf91Q6ZV80 131 aa7.9□□□□□ -1.14
HIF1A-203ENST00000394997 MRAP2Q96G30 205 aa7.9□□□□□ -1.14
HIF1A-203ENST00000394997 AGRNO00468 2067 aa7.9□□□□□ -1.15
HIF1A-203ENST00000394997 A0A096LNJ9 63 aa7.9□□□□□ -1.15
HIF1A-203ENST00000394997 OOSP1A8MZH6 123 aa7.9□□□□□ -1.15
HIF1A-203ENST00000394997 HAX1O00165 279 aa7.9□□□□□ -1.15
HIF1A-203ENST00000394997 FOXE3Q13461 319 aa7.9□□□□□ -1.15
HIF1A-203ENST00000394997 GPHB5Q86YW7 130 aa7.9□□□□□ -1.15
HIF1A-203ENST00000394997 M0R381 172 aa7.89□□□□□ -1.15
HIF1A-203ENST00000394997 LGALS9BQ3B8N2 356 aa7.89□□□□□ -1.15
HIF1A-203ENST00000394997 MRPL51Q4U2R6 128 aaKnown RBP7.89□□□□□ -1.15
HIF1A-203ENST00000394997 LGALS9CQ6DKI2 356 aa7.89□□□□□ -1.15
HIF1A-203ENST00000394997 RAB1BQ9H0U4 201 aa7.89□□□□□ -1.15
HIF1A-203ENST00000394997 CENPVL3A0A0U1RRI6 287 aa7.89□□□□□ -1.15
HIF1A-203ENST00000394997 B5MCH6 92 aa7.89□□□□□ -1.15
HIF1A-203ENST00000394997 Q6AWC8 147 aa7.89□□□□□ -1.15
HIF1A-203ENST00000394997 C20orf78Q9BR46 151 aa7.89□□□□□ -1.15
HIF1A-203ENST00000394997 PRRC2AP48634 2157 aaKnown RBP7.89□□□□□ -1.15
HIF1A-203ENST00000394997 PRSS2P07478 247 aa7.89□□□□□ -1.15
HIF1A-203ENST00000394997 UBE2E1P51965 193 aa7.89□□□□□ -1.15
HIF1A-203ENST00000394997 U3KQK5 164 aa7.89□□□□□ -1.15
HIF1A-203ENST00000394997 HELZ2Q9BYK8 2649 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms