RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 C11orf53Q8IXP5 236 aa13.6□□□□□ -0.23
SIN3A-203ENST00000394949 ZNF625Q96I27 306 aaPredicted RBP13.6□□□□□ -0.23
SIN3A-203ENST00000394949 GP9P14770 177 aa13.6□□□□□ -0.23
SIN3A-203ENST00000394949 ANKRD29Q8N6D5 301 aa13.6□□□□□ -0.23
SIN3A-203ENST00000394949 LINC00173Q6ZV60 143 aa13.59□□□□□ -0.23
SIN3A-203ENST00000394949 IGHV1-69P01742 117 aa13.59□□□□□ -0.23
SIN3A-203ENST00000394949 ACYP1P07311 99 aa13.59□□□□□ -0.23
SIN3A-203ENST00000394949 YLPM1P49750 1951 aaKnown RBP13.59□□□□□ -0.23
SIN3A-203ENST00000394949 ANAPC1Q9H1A4 1944 aa13.58□□□□□ -0.23
SIN3A-203ENST00000394949 TRACP01848 142 aa13.58□□□□□ -0.23
SIN3A-203ENST00000394949 SS18Q15532 418 aa13.58□□□□□ -0.23
SIN3A-203ENST00000394949 RHOHQ15669 191 aa13.58□□□□□ -0.23
SIN3A-203ENST00000394949 UBL5Q9BZL1 73 aa13.58□□□□□ -0.23
SIN3A-203ENST00000394949 CACNA1AO00555 2505 aa13.58□□□□□ -0.24
SIN3A-203ENST00000394949 SYNJ2BPP57105 145 aa13.58□□□□□ -0.24
SIN3A-203ENST00000394949 RNF223E7ERA6 249 aa13.57□□□□□ -0.24
SIN3A-203ENST00000394949 SH2D6Q7Z4S9 175 aa13.57□□□□□ -0.24
SIN3A-203ENST00000394949 TRAV13-2A0A0B4J235 113 aa13.57□□□□□ -0.24
SIN3A-203ENST00000394949 COL4A6Q14031 1691 aa13.57□□□□□ -0.24
SIN3A-203ENST00000394949 FAM167A-AS1Q96KT0 104 aa13.56□□□□□ -0.24
SIN3A-203ENST00000394949 CITED1Q99966 193 aa13.56□□□□□ -0.24
SIN3A-203ENST00000394949 B5MCH6 92 aa13.56□□□□□ -0.24
SIN3A-203ENST00000394949 RPL35AP18077 110 aaKnown RBP13.56□□□□□ -0.24
SIN3A-203ENST00000394949 TEN1Q86WV5 123 aa13.56□□□□□ -0.24
SIN3A-203ENST00000394949 C17orf77Q96MU5 243 aa13.56□□□□□ -0.24
SIN3A-203ENST00000394949 PIP4P1Q86T03 277 aa13.56□□□□□ -0.24
SIN3A-203ENST00000394949 IGHV3-53P01767 116 aa13.55□□□□□ -0.24
SIN3A-203ENST00000394949 G3V4G9 280 aa13.55□□□□□ -0.24
SIN3A-203ENST00000394949 DEFB131AP59861 70 aa13.55□□□□□ -0.24
SIN3A-203ENST00000394949 FAM215AQ9Y5M1 114 aa13.55□□□□□ -0.24
SIN3A-203ENST00000394949 DIAPH2-AS1Q14236 149 aa13.55□□□□□ -0.24
SIN3A-203ENST00000394949 PATE2Q6UY27 113 aa13.55□□□□□ -0.24
SIN3A-203ENST00000394949 NBL1P41271 181 aa13.54□□□□□ -0.24
SIN3A-203ENST00000394949 UBE2E2Q96LR5 201 aa13.54□□□□□ -0.24
SIN3A-203ENST00000394949 HERVK_113P63121 156 aa13.54□□□□□ -0.24
SIN3A-203ENST00000394949 DYNAPQ8N1N2 210 aa13.54□□□□□ -0.24
SIN3A-203ENST00000394949 AGPAT4-IT1Q9H0P7 198 aa13.54□□□□□ -0.24
SIN3A-203ENST00000394949 INS-IGF2F8WCM5 200 aa13.54□□□□□ -0.24
SIN3A-203ENST00000394949 SPINK13Q1W4C9 94 aa13.54□□□□□ -0.24
SIN3A-203ENST00000394949 RUSC1-AS1Q66K80 236 aa13.54□□□□□ -0.24
SIN3A-203ENST00000394949 G3V318 75 aa13.53□□□□□ -0.24
SIN3A-203ENST00000394949 FXYD2P54710 66 aa13.53□□□□□ -0.24
SIN3A-203ENST00000394949 GTSF1Q8WW33 167 aa13.53□□□□□ -0.24
SIN3A-203ENST00000394949 CFHR4Q92496 578 aa13.52□□□□□ -0.24
SIN3A-203ENST00000394949 TRAV12-1A0A0B4J245 112 aa13.52□□□□□ -0.24
SIN3A-203ENST00000394949 SPATA12Q7Z6I5 190 aa13.52□□□□□ -0.24
SIN3A-203ENST00000394949 TRBV6-1A0A0K0K1D8 114 aa13.52□□□□□ -0.25
SIN3A-203ENST00000394949 J3QLI3 93 aa13.52□□□□□ -0.25
SIN3A-203ENST00000394949 PRSS47A8MTI9 375 aa13.52□□□□□ -0.25
SIN3A-203ENST00000394949 DENND4AQ7Z401 1863 aa13.51□□□□□ -0.25
SIN3A-203ENST00000394949 KNCNA6PVL3 124 aa13.51□□□□□ -0.25
SIN3A-203ENST00000394949 WFDC2Q14508 124 aa13.51□□□□□ -0.25
SIN3A-203ENST00000394949 ATP6V0E2Q8NHE4 81 aa13.51□□□□□ -0.25
SIN3A-203ENST00000394949 C2orf70A6NJV1 201 aa13.51□□□□□ -0.25
SIN3A-203ENST00000394949 LHBP01229 141 aa13.51□□□□□ -0.25
SIN3A-203ENST00000394949 KLK9Q9UKQ9 250 aa13.51□□□□□ -0.25
SIN3A-203ENST00000394949 YPEL4Q96NS1 127 aa13.5□□□□□ -0.25
SIN3A-203ENST00000394949 SS18L2Q9UHA2 77 aa13.5□□□□□ -0.25
SIN3A-203ENST00000394949 IGLV2-14P01704 120 aa13.5□□□□□ -0.25
SIN3A-203ENST00000394949 RPL32P62910 135 aaKnown RBP13.5□□□□□ -0.25
SIN3A-203ENST00000394949 C3orf56Q8N813 242 aa13.5□□□□□ -0.25
SIN3A-203ENST00000394949 TANC1Q9C0D5 1861 aa13.5□□□□□ -0.25
SIN3A-203ENST00000394949 I3L2K1 104 aa13.49□□□□□ -0.25
SIN3A-203ENST00000394949 FOXI1Q12951 378 aa13.49□□□□□ -0.25
SIN3A-203ENST00000394949 CR1LQ2VPA4 569 aa13.49□□□□□ -0.25
SIN3A-203ENST00000394949 UBE2DNLQ8IWF7 75 aa13.49□□□□□ -0.25
SIN3A-203ENST00000394949 TMEM243Q9BU79 118 aa13.49□□□□□ -0.25
SIN3A-203ENST00000394949 PLXNB3Q9ULL4 1909 aa13.49□□□□□ -0.25
SIN3A-203ENST00000394949 IGKV1-17P01599 117 aa13.49□□□□□ -0.25
SIN3A-203ENST00000394949 CUL9Q8IWT3 2517 aa13.48□□□□□ -0.25
SIN3A-203ENST00000394949 DEFB121Q5J5C9 76 aa13.48□□□□□ -0.25
SIN3A-203ENST00000394949 LINC01619G3V211 115 aa13.48□□□□□ -0.25
SIN3A-203ENST00000394949 H3BUA1 57 aa13.48□□□□□ -0.25
SIN3A-203ENST00000394949 GATA1P15976 413 aaPredicted RBP13.48□□□□□ -0.25
SIN3A-203ENST00000394949 TICRRQ7Z2Z1 1910 aa13.48□□□□□ -0.25
SIN3A-203ENST00000394949 IGHV7-4-1A0A0J9YVY3 117 aa13.48□□□□□ -0.25
SIN3A-203ENST00000394949 CRYBA4P53673 196 aa13.48□□□□□ -0.25
SIN3A-203ENST00000394949 TMEM126AQ9H061 195 aa13.48□□□□□ -0.25
SIN3A-203ENST00000394949 C22orf46C9J442 243 aa13.47□□□□□ -0.25
SIN3A-203ENST00000394949 NOTCH4Q99466 2003 aa13.47□□□□□ -0.25
SIN3A-203ENST00000394949 P0C879 139 aa13.46□□□□□ -0.25
SIN3A-203ENST00000394949 SONP18583 2426 aaKnown RBP13.46□□□□□ -0.25
SIN3A-203ENST00000394949 FRMD6-AS1P0C7T7 363 aa13.46□□□□□ -0.25
SIN3A-203ENST00000394949 DEFB130BP0DP73 79 aa13.46□□□□□ -0.25
SIN3A-203ENST00000394949 DEFB130AP0DP74 79 aa13.46□□□□□ -0.25
SIN3A-203ENST00000394949 CTRLP40313 264 aa13.46□□□□□ -0.25
SIN3A-203ENST00000394949 FOXE3Q13461 319 aa13.46□□□□□ -0.25
SIN3A-203ENST00000394949 CHD3Q12873 2000 aaKnown RBP13.46□□□□□ -0.25
SIN3A-203ENST00000394949 MED13Q9UHV7 2174 aa13.46□□□□□ -0.26
SIN3A-203ENST00000394949 A0A1B0GXF2 115 aa13.46□□□□□ -0.26
SIN3A-203ENST00000394949 C19orf71A6NCJ1 209 aa13.46□□□□□ -0.26
SIN3A-203ENST00000394949 K7EIM0 57 aa13.46□□□□□ -0.26
SIN3A-203ENST00000394949 ZNRF2Q8NHG8 242 aa13.46□□□□□ -0.26
SIN3A-203ENST00000394949 Q96MF0 132 aa13.46□□□□□ -0.26
SIN3A-203ENST00000394949 PLCE1Q9P212 2302 aa13.46□□□□□ -0.26
SIN3A-203ENST00000394949 F8WEM9 126 aa13.45□□□□□ -0.26
SIN3A-203ENST00000394949 PFN2P35080 140 aa13.45□□□□□ -0.26
SIN3A-203ENST00000394949 LINC01620Q4KN68 170 aa13.45□□□□□ -0.26
SIN3A-203ENST00000394949 IGFBPL1Q8WX77 278 aa13.45□□□□□ -0.26
SIN3A-203ENST00000394949 E9PLD3 99 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms