RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 UBE2L3P68036 154 aaKnown RBP14.06□□□□□ -0.16
TRAF4-203ENST00000394925 HYLS1Q96M11 299 aa14.06□□□□□ -0.16
TRAF4-203ENST00000394925 KCNIP2Q9NS61 270 aa14.06□□□□□ -0.16
TRAF4-203ENST00000394925 H2AFB2P0C5Z0 115 aa14.05□□□□□ -0.16
TRAF4-203ENST00000394925 WDR61Q9GZS3 305 aaKnown RBP14.05□□□□□ -0.16
TRAF4-203ENST00000394925 KRTAP29-1A8MX34 341 aaPredicted RBP14.04□□□□□ -0.16
TRAF4-203ENST00000394925 TYMSP04818 313 aa14.04□□□□□ -0.16
TRAF4-203ENST00000394925 LINC00528Q8N1L1 170 aa14.04□□□□□ -0.16
TRAF4-203ENST00000394925 SLC25A29Q8N8R3 303 aa14.04□□□□□ -0.16
TRAF4-203ENST00000394925 TMED6Q8WW62 240 aa14.04□□□□□ -0.16
TRAF4-203ENST00000394925 RPH3ALQ9UNE2 315 aa14.04□□□□□ -0.16
TRAF4-203ENST00000394925 FBLL1A6NHQ2 334 aaKnown RBP14.03□□□□□ -0.16
TRAF4-203ENST00000394925 WFDC2Q14508 124 aa14.03□□□□□ -0.16
TRAF4-203ENST00000394925 BOLA1Q9Y3E2 137 aa14.03□□□□□ -0.16
TRAF4-203ENST00000394925 TRAV21A0A0B4J279 112 aa14.02□□□□□ -0.17
TRAF4-203ENST00000394925 C17orf112F2Z3M2 114 aa14.02□□□□□ -0.17
TRAF4-203ENST00000394925 LELP1Q5T871 98 aa14.02□□□□□ -0.17
TRAF4-203ENST00000394925 PRADC1Q9BSG0 188 aa14.02□□□□□ -0.17
TRAF4-203ENST00000394925 SDF2L1Q9HCN8 221 aa14.02□□□□□ -0.17
TRAF4-203ENST00000394925 OR5AC2Q9NZP5 309 aa14.02□□□□□ -0.17
TRAF4-203ENST00000394925 PGPA6NDG6 321 aa14.01□□□□□ -0.17
TRAF4-203ENST00000394925 F6UZH7 168 aa14.01□□□□□ -0.17
TRAF4-203ENST00000394925 Q6ZSA8 131 aa14.01□□□□□ -0.17
TRAF4-203ENST00000394925 CMTM2Q8TAZ6 248 aa14.01□□□□□ -0.17
TRAF4-203ENST00000394925 DEFB104AQ8WTQ1 72 aa14.01□□□□□ -0.17
TRAF4-203ENST00000394925 TM2D2Q9BX73 214 aa14.01□□□□□ -0.17
TRAF4-203ENST00000394925 IGHV3-73A0A0B4J1V6 119 aa14□□□□□ -0.17
TRAF4-203ENST00000394925 EIF3GO75821 320 aaKnown RBP eCLIP14□□□□□ -0.17
TRAF4-203ENST00000394925 SIX6O95475 246 aa14□□□□□ -0.17
TRAF4-203ENST00000394925 RHOHQ15669 191 aa14□□□□□ -0.17
TRAF4-203ENST00000394925 LRRC37A5PQ49AS3 106 aa14□□□□□ -0.17
TRAF4-203ENST00000394925 KHDC3LQ587J8 217 aa14□□□□□ -0.17
TRAF4-203ENST00000394925 FFAR4Q5NUL3 377 aa14□□□□□ -0.17
TRAF4-203ENST00000394925 GOLT1AQ6ZVE7 132 aa14□□□□□ -0.17
TRAF4-203ENST00000394925 TVP23CQ96ET8 276 aa14□□□□□ -0.17
TRAF4-203ENST00000394925 ATP5SQ99766 215 aa14□□□□□ -0.17
TRAF4-203ENST00000394925 NMES1Q9C002 83 aa14□□□□□ -0.17
TRAF4-203ENST00000394925 OTORQ9NRC9 128 aa14□□□□□ -0.17
TRAF4-203ENST00000394925 LECT2O14960 151 aa13.99□□□□□ -0.17
TRAF4-203ENST00000394925 LAGE3Q14657 143 aa13.99□□□□□ -0.17
TRAF4-203ENST00000394925 ZNF876PQ49A33 203 aa13.99□□□□□ -0.17
TRAF4-203ENST00000394925 CFAP126Q5VTH2 177 aa13.99□□□□□ -0.17
TRAF4-203ENST00000394925 ASB13Q8WXK3 278 aa13.99□□□□□ -0.17
TRAF4-203ENST00000394925 KCNS1Q96KK3 526 aa13.99□□□□□ -0.17
TRAF4-203ENST00000394925 TREM1Q9NP99 234 aa13.99□□□□□ -0.17
TRAF4-203ENST00000394925 TRAV8-1A0A0A6YYK1 113 aa13.98□□□□□ -0.17
TRAF4-203ENST00000394925 FAM240BA0A1B0GVZ2 78 aa13.98□□□□□ -0.17
TRAF4-203ENST00000394925 TRBV6-4A0A1B0GX49 114 aa13.98□□□□□ -0.17
TRAF4-203ENST00000394925 RS1O15537 224 aa13.98□□□□□ -0.17
TRAF4-203ENST00000394925 TAS2R45P59539 299 aa13.98□□□□□ -0.17
TRAF4-203ENST00000394925 DPPA3Q6W0C5 159 aa13.98□□□□□ -0.17
TRAF4-203ENST00000394925 ATP6V0E2Q8NHE4 81 aa13.98□□□□□ -0.17
TRAF4-203ENST00000394925 GTSF1LQ9H1H1 148 aa13.98□□□□□ -0.17
TRAF4-203ENST00000394925 MBD2Q9UBB5 411 aa13.98□□□□□ -0.17
TRAF4-203ENST00000394925 LRP1Q07954 4544 aaKnown RBP13.97□□□□□ -0.17
TRAF4-203ENST00000394925 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-203ENST00000394925 H0YIZ8 118 aa13.97□□□□□ -0.17
TRAF4-203ENST00000394925 FAM74A1Q5RGS3 127 aa13.97□□□□□ -0.17
TRAF4-203ENST00000394925 Q8N3U1 123 aa13.97□□□□□ -0.17
TRAF4-203ENST00000394925 CIDEAO60543 219 aa13.95□□□□□ -0.18
TRAF4-203ENST00000394925 LINC01620Q4KN68 170 aa13.95□□□□□ -0.18
TRAF4-203ENST00000394925 HMCN2Q8NDA2 5059 aa13.95□□□□□ -0.18
TRAF4-203ENST00000394925 GNG5P63218 68 aa13.94□□□□□ -0.18
TRAF4-203ENST00000394925 SERTAD4-AS1Q5TG53 156 aa13.94□□□□□ -0.18
TRAF4-203ENST00000394925 SGK494Q96LW2 274 aa13.94□□□□□ -0.18
TRAF4-203ENST00000394925 TRAV8-3A0A0A6YYJ7 113 aa13.93□□□□□ -0.18
TRAF4-203ENST00000394925 C11orf21Q9P2W6 132 aa13.93□□□□□ -0.18
TRAF4-203ENST00000394925 PGPEP1LA6NFU8 196 aa13.92□□□□□ -0.18
TRAF4-203ENST00000394925 MGST1P10620 155 aaKnown RBP13.92□□□□□ -0.18
TRAF4-203ENST00000394925 SCXQ7RTU7 201 aa13.92□□□□□ -0.18
TRAF4-203ENST00000394925 DAZ4Q86SG3 579 aaKnown RBP13.92□□□□□ -0.18
TRAF4-203ENST00000394925 ARL6IP6Q8N6S5 226 aa13.92□□□□□ -0.18
TRAF4-203ENST00000394925 SYT8Q8NBV8 401 aa13.92□□□□□ -0.18
TRAF4-203ENST00000394925 SCGB1C1Q8TD33 95 aa13.92□□□□□ -0.18
TRAF4-203ENST00000394925 BAALCQ8WXS3 180 aa13.92□□□□□ -0.18
TRAF4-203ENST00000394925 DAZ3Q9NR90 486 aaKnown RBP13.92□□□□□ -0.18
TRAF4-203ENST00000394925 ZNF80P51504 273 aaPredicted RBP13.91□□□□□ -0.18
TRAF4-203ENST00000394925 ZNF506Q5JVG8 444 aa13.91□□□□□ -0.18
TRAF4-203ENST00000394925 MZT2BQ6NZ67 158 aa13.91□□□□□ -0.18
TRAF4-203ENST00000394925 C9orf85Q96MD7 179 aa13.91□□□□□ -0.18
TRAF4-203ENST00000394925 NDFIP1Q9BT67 221 aa13.91□□□□□ -0.18
TRAF4-203ENST00000394925 CCDC32Q9BV29 185 aa13.91□□□□□ -0.18
TRAF4-203ENST00000394925 SMIM3Q9BZL3 60 aa13.91□□□□□ -0.18
TRAF4-203ENST00000394925 UBR4Q5T4S7 5183 aa13.9□□□□□ -0.18
TRAF4-203ENST00000394925 PQLC2Q6ZP29 291 aa13.9□□□□□ -0.18
TRAF4-203ENST00000394925 TMEM75Q8N9X5 138 aa13.9□□□□□ -0.18
TRAF4-203ENST00000394925 HSPB11Q9Y547 144 aa13.9□□□□□ -0.18
TRAF4-203ENST00000394925 FAT3Q8TDW7 4589 aa13.9□□□□□ -0.19
TRAF4-203ENST00000394925 A0A1W2PPV4 95 aa13.89□□□□□ -0.19
TRAF4-203ENST00000394925 GAGE12JA6NER3 117 aa13.89□□□□□ -0.19
TRAF4-203ENST00000394925 TAAR5O14804 337 aa13.89□□□□□ -0.19
TRAF4-203ENST00000394925 CYCSP99999 105 aaKnown RBP13.89□□□□□ -0.19
TRAF4-203ENST00000394925 GAGE1Q13065 139 aa13.89□□□□□ -0.19
TRAF4-203ENST00000394925 GAGE4Q13068 117 aa13.89□□□□□ -0.19
TRAF4-203ENST00000394925 GAGE5Q13069 117 aa13.89□□□□□ -0.19
TRAF4-203ENST00000394925 GAGE13Q4V321 117 aa13.89□□□□□ -0.19
TRAF4-203ENST00000394925 TOR2AQ5JU69 321 aa13.89□□□□□ -0.19
TRAF4-203ENST00000394925 RBFOX3A6NFN3 312 aa13.88□□□□□ -0.19
TRAF4-203ENST00000394925 GGTLC3B5MD39 225 aa13.88□□□□□ -0.19
TRAF4-203ENST00000394925 HMGB3O15347 200 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms