RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 XGP55808 180 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 C16orf92Q96LL3 132 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 TRGV9Q99603 122 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 PTPRBP23467 1997 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 CGB1A6NKQ9 187 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 FSTL3O95633 263 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 NPYP01303 97 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 HLA-DRB4P13762 266 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 C8orf46Q8TAG6 207 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 DDB2Q92466 427 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 IGF2BP2-AS1Q96M15 143 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 FAM110AQ9BQ89 295 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 LINC00574Q9H8X3 128 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 HLA-DRB4X5D2U9 266 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 PCSK5Q92824 1860 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 SORL1Q92673 2214 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 J3KT08 172 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 M0QXV9 152 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 MRPL51Q4U2R6 128 aaKnown RBP4.48□□□□□ -1.69
RFFL-202ENST00000394597 RUSC1-AS1Q66K80 236 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 ANKRD29Q8N6D5 301 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 RNF125Q96EQ8 232 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 PRUNE2Q8WUY3 3088 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 CDH23Q9H251 3354 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 JMJD1CQ15652 2540 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 PAPPA-AS1Q5QFB9 102 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 LINC00527Q9UJ94 153 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 MYO9AB2RTY4 2548 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 ZNF462Q96JM2 2506 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 CCDC179H3BU77 68 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 C10orf105Q8TEF2 133 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 KIR2DL4Q99706 377 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 CITED2Q99967 270 aaPredicted RBP4.47□□□□□ -1.69
RFFL-202ENST00000394597 IGHV4-61A0A0C4DH41 118 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 J3QLI3 93 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 M0R381 172 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 HOXB4P17483 251 aaPredicted RBP4.47□□□□□ -1.69
RFFL-202ENST00000394597 ORMDL2Q53FV1 153 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 FAM120AOSQ5T036 256 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 DYNLRB2Q8TF09 96 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 C1orf43Q9BWL3 253 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 SLC25A39Q9BZJ4 359 aaPredicted RBP4.47□□□□□ -1.69
RFFL-202ENST00000394597 ZFYVE26Q68DK2 2539 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 IGHV3OR16-13A0A075B7E8 117 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 IGHV3-74A0A0B4J1X5 117 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 IGHV3-11P01762 117 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 FGF6P10767 208 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 WT1-ASQ06250 92 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 CDSNQ15517 529 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 C15orf32Q32M92 178 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 MAPK1IP1LQ8NDC0 245 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 Q96MF0 132 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 TPSG1Q9NRR2 321 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 PRO1854Q9UHT4 67 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 PHLDA3Q9Y5J5 127 aa4.47□□□□□ -1.69
RFFL-202ENST00000394597 UNC80Q8N2C7 3258 aa4.46□□□□□ -1.69
RFFL-202ENST00000394597 IGHV4-30-2A0A087WSY4 118 aa4.46□□□□□ -1.69
RFFL-202ENST00000394597 IGLV1-47P01700 117 aa4.46□□□□□ -1.69
RFFL-202ENST00000394597 IGLV2-8P01709 118 aa4.46□□□□□ -1.69
RFFL-202ENST00000394597 IGHV3OR16-8A0A075B7F1 116 aa4.46□□□□□ -1.7
RFFL-202ENST00000394597 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.46□□□□□ -1.7
RFFL-202ENST00000394597 ZFP36P26651 326 aaKnown RBP4.46□□□□□ -1.7
RFFL-202ENST00000394597 ZNF843Q8N446 348 aa4.46□□□□□ -1.7
RFFL-202ENST00000394597 PRADC1Q9BSG0 188 aa4.46□□□□□ -1.7
RFFL-202ENST00000394597 IGHV3-49A0A0A0MS15 119 aa4.46□□□□□ -1.7
RFFL-202ENST00000394597 A0A1B0GXF2 115 aa4.46□□□□□ -1.7
RFFL-202ENST00000394597 PROP1O75360 226 aa4.46□□□□□ -1.7
RFFL-202ENST00000394597 C11orf71Q6IPW1 123 aa4.46□□□□□ -1.7
RFFL-202ENST00000394597 HIVEP3Q5T1R4 2406 aa4.46□□□□□ -1.7
RFFL-202ENST00000394597 TRBV7-1A0A0A6YYK4 115 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 FAM236AA0A1B0GUQ0 79 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 FAM236BA0A1B0GV22 79 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 SH2D1AO60880 128 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 TRACP01848 142 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 DEFB113Q30KQ7 82 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 Q8N7P7 452 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 LY6G5BQ8NDX9 201 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 IGHV3-64A0A075B6Q5 118 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 TRAV8-3A0A0A6YYJ7 113 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 IGHV3-66A0A0C4DH42 116 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 F8VRH5 84 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 LOXL1Q08397 574 aaPredicted RBP4.45□□□□□ -1.7
RFFL-202ENST00000394597 FAM110DQ8TAY7 271 aaPredicted RBP4.45□□□□□ -1.7
RFFL-202ENST00000394597 FXYD5Q96DB9 178 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 ATP6V0E1O15342 81 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 DNAL4O96015 105 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 PAX8Q06710 450 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 NRGNQ92686 78 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 USMG5Q96IX5 58 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 TM2D2Q9BX73 214 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 C2CD3Q4AC94 2353 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 CENPVL3A0A0U1RRI6 287 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 M0R2P5 195 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 HLA-DMBP28068 263 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 MORN5Q5VZ52 161 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 DGAT2L7PQ6IED9 249 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 MORN3Q6PF18 240 aaPredicted RBP4.45□□□□□ -1.7
RFFL-202ENST00000394597 MBD6Q96DN6 1003 aa4.45□□□□□ -1.7
RFFL-202ENST00000394597 RITA1Q96K30 269 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms