RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 Q6AWC8 147 aa8.45□□□□□ -1.06
TCOF1-203ENST00000394269 SMPXQ9UHP9 88 aa8.45□□□□□ -1.06
TCOF1-203ENST00000394269 IGHV1-24A0A0C4DH33 117 aa8.45□□□□□ -1.06
TCOF1-203ENST00000394269 CYSRT1A8MQ03 144 aa8.45□□□□□ -1.06
TCOF1-203ENST00000394269 H3BUA1 57 aa8.45□□□□□ -1.06
TCOF1-203ENST00000394269 GATA1P15976 413 aaPredicted RBP8.45□□□□□ -1.06
TCOF1-203ENST00000394269 KLF5Q13887 457 aaPredicted RBP8.45□□□□□ -1.06
TCOF1-203ENST00000394269 PSMG4Q5JS54 123 aa8.45□□□□□ -1.06
TCOF1-203ENST00000394269 AP5S1Q9NUS5 200 aa8.45□□□□□ -1.06
TCOF1-203ENST00000394269 A0A1W2PRX2 142 aa8.44□□□□□ -1.06
TCOF1-203ENST00000394269 HTN1P15515 57 aa8.44□□□□□ -1.06
TCOF1-203ENST00000394269 MRPL51Q4U2R6 128 aaKnown RBP8.44□□□□□ -1.06
TCOF1-203ENST00000394269 FAM104BQ5XKR9 115 aa8.44□□□□□ -1.06
TCOF1-203ENST00000394269 IGHV4OR15-8A0A075B7B6 117 aa8.44□□□□□ -1.06
TCOF1-203ENST00000394269 A0A087WW49 117 aa8.44□□□□□ -1.06
TCOF1-203ENST00000394269 DEFB104AQ8WTQ1 72 aa8.44□□□□□ -1.06
TCOF1-203ENST00000394269 TRAV26-2A0A0B4J265 109 aa8.44□□□□□ -1.06
TCOF1-203ENST00000394269 RPS20P60866 119 aaKnown RBP8.44□□□□□ -1.06
TCOF1-203ENST00000394269 KLK9Q2XQG4 91 aa8.44□□□□□ -1.06
TCOF1-203ENST00000394269 SPATA45Q537H7 98 aa8.44□□□□□ -1.06
TCOF1-203ENST00000394269 ORMDL3Q8N138 153 aa8.44□□□□□ -1.06
TCOF1-203ENST00000394269 KLK9Q9UKQ9 250 aa8.44□□□□□ -1.06
TCOF1-203ENST00000394269 G0S2P27469 103 aa8.43□□□□□ -1.06
TCOF1-203ENST00000394269 NUTF2P61970 127 aaKnown RBP8.43□□□□□ -1.06
TCOF1-203ENST00000394269 OR8A1Q8NGG7 326 aa8.43□□□□□ -1.06
TCOF1-203ENST00000394269 FBLL1A6NHQ2 334 aaKnown RBP8.43□□□□□ -1.06
TCOF1-203ENST00000394269 A6NJY4 79 aa8.43□□□□□ -1.06
TCOF1-203ENST00000394269 CFHR3Q02985 330 aa8.43□□□□□ -1.06
TCOF1-203ENST00000394269 Q8N976 141 aa8.43□□□□□ -1.06
TCOF1-203ENST00000394269 TRAV12-2A0A075B6T6 113 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 KIR2DL5BA0A0G2JN68 375 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 KIR2DL5BA0A0G2JPC4 375 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 GNRH2O43555 120 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 HOXD3P31249 432 aaPredicted RBP8.42□□□□□ -1.06
TCOF1-203ENST00000394269 SLURP1P55000 103 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 KIR2DL5AQ8N109 375 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 KLHDC1Q8N7A1 406 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 ZNF702PQ9H963 129 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 NPYP01303 97 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 C9orf47Q6ZRZ4 202 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 TMEM70Q9BUB7 260 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 YAE1D1Q9NRH1 226 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 RBAKDNA6NC62 111 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 RAB4AP20338 218 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 DPF1Q92782 380 aa8.42□□□□□ -1.06
TCOF1-203ENST00000394269 NOTCH1P46531 2555 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 OR5AL1P0C617 328 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 SMIM15Q7Z3B0 74 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 SPATA12Q7Z6I5 190 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 ZNF575Q86XF7 245 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 MS4A6AQ9H2W1 248 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 SIGLEC8Q9NYZ4 499 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 CR1P17927 2039 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 TRAV12-3A0A0B4J271 114 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 A0A1B0GW15 77 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 IGLC6P0CF74 106 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 LINC00477Q96M19 166 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 OVOL1O14753 267 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 TCAPO15273 167 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 ID1P41134 155 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 ANXA2RQ3ZCQ2 193 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 TEX43Q6ZNM6 134 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 OR11H1Q8NG94 326 aa8.41□□□□□ -1.06
TCOF1-203ENST00000394269 LINC01559Q495D7 138 aa8.4□□□□□ -1.06
TCOF1-203ENST00000394269 CHCHD1Q96BP2 118 aaKnown RBP8.4□□□□□ -1.06
TCOF1-203ENST00000394269 PHLDA3Q9Y5J5 127 aa8.4□□□□□ -1.06
TCOF1-203ENST00000394269 C2orf70A6NJV1 201 aa8.4□□□□□ -1.07
TCOF1-203ENST00000394269 KRTAP1-3Q8IUG1 177 aa8.4□□□□□ -1.07
TCOF1-203ENST00000394269 ATP6V0BQ99437 205 aa8.4□□□□□ -1.07
TCOF1-203ENST00000394269 MAP1LC3CQ9BXW4 147 aa8.4□□□□□ -1.07
TCOF1-203ENST00000394269 TP73-AS1Q9UF72 201 aa8.4□□□□□ -1.07
TCOF1-203ENST00000394269 OR4C46A6NHA9 309 aa8.39□□□□□ -1.07
TCOF1-203ENST00000394269 hDV102S1A0JD36 115 aa8.39□□□□□ -1.07
TCOF1-203ENST00000394269 MGPP08493 103 aa8.39□□□□□ -1.07
TCOF1-203ENST00000394269 CTRLP40313 264 aa8.39□□□□□ -1.07
TCOF1-203ENST00000394269 TCTEX1D4Q5JR98 221 aa8.39□□□□□ -1.07
TCOF1-203ENST00000394269 LRRC75A-AS1Q8N1F1 130 aa8.39□□□□□ -1.07
TCOF1-203ENST00000394269 ZFAND2AQ8N6M9 145 aa8.39□□□□□ -1.07
TCOF1-203ENST00000394269 C14orf178Q8N769 122 aaPredicted RBP8.39□□□□□ -1.07
TCOF1-203ENST00000394269 TRAV21A0A0B4J279 112 aa8.39□□□□□ -1.07
TCOF1-203ENST00000394269 SOCS3O14543 225 aa8.39□□□□□ -1.07
TCOF1-203ENST00000394269 ODF1Q14990 250 aa8.39□□□□□ -1.07
TCOF1-203ENST00000394269 Q6ZN92 141 aa8.39□□□□□ -1.07
TCOF1-203ENST00000394269 SYS1-DBNDD2H3BUS1 97 aa8.38□□□□□ -1.07
TCOF1-203ENST00000394269 LGALS1P09382 135 aaKnown RBP8.38□□□□□ -1.07
TCOF1-203ENST00000394269 SNRPD3P62318 126 aaKnown RBP8.38□□□□□ -1.07
TCOF1-203ENST00000394269 ZNF493Q6ZR52 646 aa8.38□□□□□ -1.07
TCOF1-203ENST00000394269 KLHL30-AS1Q8NEE0 82 aa8.38□□□□□ -1.07
TCOF1-203ENST00000394269 MRPL53Q96EL3 112 aaKnown RBP8.38□□□□□ -1.07
TCOF1-203ENST00000394269 PDZD2O15018 2839 aa8.38□□□□□ -1.07
TCOF1-203ENST00000394269 ELANEP08246 267 aa8.38□□□□□ -1.07
TCOF1-203ENST00000394269 SPINK13Q1W4C9 94 aa8.38□□□□□ -1.07
TCOF1-203ENST00000394269 COX8CQ7Z4L0 72 aa8.38□□□□□ -1.07
TCOF1-203ENST00000394269 TMEM191AQ9H0A3 160 aa8.38□□□□□ -1.07
TCOF1-203ENST00000394269 DMRTA1Q5VZB9 504 aa8.38□□□□□ -1.07
TCOF1-203ENST00000394269 SNAI2O43623 268 aa8.37□□□□□ -1.07
TCOF1-203ENST00000394269 CD7P09564 240 aa8.37□□□□□ -1.07
TCOF1-203ENST00000394269 FAM159AQ6UWV7 190 aa8.37□□□□□ -1.07
TCOF1-203ENST00000394269 DCANP1Q8TF63 244 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms