RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 HIF1ANQ9NWT6 349 aa10.63□□□□□ -0.71
GAPVD1-205ENST00000394084 U3KQE9 123 aa10.63□□□□□ -0.71
GAPVD1-205ENST00000394084 TRBV25-1A0A075B6N4 114 aa10.63□□□□□ -0.71
GAPVD1-205ENST00000394084 A0A1W2PPM0 123 aa10.63□□□□□ -0.71
GAPVD1-205ENST00000394084 IGHV3-11P01762 117 aa10.63□□□□□ -0.71
GAPVD1-205ENST00000394084 RPL11P62913 178 aaKnown RBP10.63□□□□□ -0.71
GAPVD1-205ENST00000394084 SMIM13P0DJ93 91 aa10.62□□□□□ -0.71
GAPVD1-205ENST00000394084 UCNP55089 124 aa10.62□□□□□ -0.71
GAPVD1-205ENST00000394084 LY6EQ16553 131 aa10.62□□□□□ -0.71
GAPVD1-205ENST00000394084 KLK9Q2XQG4 91 aa10.62□□□□□ -0.71
GAPVD1-205ENST00000394084 GLMPQ8WWB7 406 aa10.62□□□□□ -0.71
GAPVD1-205ENST00000394084 KLK9Q9UKQ9 250 aa10.62□□□□□ -0.71
GAPVD1-205ENST00000394084 MRPL53Q96EL3 112 aaKnown RBP10.62□□□□□ -0.71
GAPVD1-205ENST00000394084 MAPKAPK5-AS1Q8N8E1 139 aa10.61□□□□□ -0.71
GAPVD1-205ENST00000394084 MOB4Q9Y3A3 225 aa10.61□□□□□ -0.71
GAPVD1-205ENST00000394084 F6UB75 175 aa10.61□□□□□ -0.71
GAPVD1-205ENST00000394084 S100A4P26447 101 aaKnown RBP10.61□□□□□ -0.71
GAPVD1-205ENST00000394084 PIFOQ8TCI5 191 aa10.61□□□□□ -0.71
GAPVD1-205ENST00000394084 NHP2Q9NX24 153 aaKnown RBP10.61□□□□□ -0.71
GAPVD1-205ENST00000394084 SRSF1Q07955 248 aaKnown RBP eCLIP10.61□□□□□ -0.71
GAPVD1-205ENST00000394084 SAMD5Q5TGI4 173 aa10.61□□□□□ -0.71
GAPVD1-205ENST00000394084 LCNL1Q6ZST4 164 aa10.61□□□□□ -0.71
GAPVD1-205ENST00000394084 ABCA2Q9BZC7 2435 aa10.61□□□□□ -0.71
GAPVD1-205ENST00000394084 C19orf84I3L1E1 186 aa10.6□□□□□ -0.71
GAPVD1-205ENST00000394084 C9orf139Q6ZV77 190 aa10.6□□□□□ -0.71
GAPVD1-205ENST00000394084 C14orf178Q8N769 122 aaPredicted RBP10.6□□□□□ -0.71
GAPVD1-205ENST00000394084 SMPXQ9UHP9 88 aa10.6□□□□□ -0.71
GAPVD1-205ENST00000394084 FABP2P12104 132 aa10.6□□□□□ -0.71
GAPVD1-205ENST00000394084 GPHB5Q86YW7 130 aa10.6□□□□□ -0.71
GAPVD1-205ENST00000394084 RPL39LQ96EH5 51 aaKnown RBP10.6□□□□□ -0.71
GAPVD1-205ENST00000394084 MGPP08493 103 aa10.59□□□□□ -0.71
GAPVD1-205ENST00000394084 RIPPLY3P57055 190 aa10.59□□□□□ -0.71
GAPVD1-205ENST00000394084 ITLN2Q8WWU7 325 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-205ENST00000394084 HIGD1BQ9P298 99 aa10.59□□□□□ -0.71
GAPVD1-205ENST00000394084 OR10J6PQ8NGY7 276 aa10.59□□□□□ -0.71
GAPVD1-205ENST00000394084 SMIM2Q9BVW6 85 aa10.59□□□□□ -0.71
GAPVD1-205ENST00000394084 A0A087WX48 190 aa10.59□□□□□ -0.71
GAPVD1-205ENST00000394084 RNASE4P34096 147 aaKnown RBP10.59□□□□□ -0.71
GAPVD1-205ENST00000394084 COTL1Q14019 142 aa10.59□□□□□ -0.71
GAPVD1-205ENST00000394084 ZFAND2AQ8N6M9 145 aa10.59□□□□□ -0.71
GAPVD1-205ENST00000394084 DEFB104AQ8WTQ1 72 aa10.59□□□□□ -0.71
GAPVD1-205ENST00000394084 IGHV4-4A0A075B6R2 117 aa10.58□□□□□ -0.72
GAPVD1-205ENST00000394084 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.58□□□□□ -0.72
GAPVD1-205ENST00000394084 ANXA2RQ3ZCQ2 193 aa10.58□□□□□ -0.72
GAPVD1-205ENST00000394084 MAP1AP78559 2803 aaPredicted RBP10.58□□□□□ -0.72
GAPVD1-205ENST00000394084 FAM223BA6NKX1 122 aa10.58□□□□□ -0.72
GAPVD1-205ENST00000394084 SRD5A1P18405 259 aa10.58□□□□□ -0.72
GAPVD1-205ENST00000394084 FAM223AQ8IWN6 122 aa10.58□□□□□ -0.72
GAPVD1-205ENST00000394084 PHLDA3Q9Y5J5 127 aa10.58□□□□□ -0.72
GAPVD1-205ENST00000394084 SPG11Q96JI7 2443 aa10.58□□□□□ -0.72
GAPVD1-205ENST00000394084 VPS13CQ709C8 3753 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 GNRH2O43555 120 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 AGRNO00468 2067 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 IGHV4-39P01824 125 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 CEND1Q8N111 149 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 RASL10AQ92737 203 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 SCGB3A1Q96QR1 104 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 IGHV1-69DA0A0B4J2H0 117 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 PRSS47A8MTI9 375 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 IGHV1-69P01742 117 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 PF4V1P10720 104 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 C19orf54Q5BKX5 351 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 PSMG4Q5JS54 123 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 MRAP2Q96G30 205 aa10.57□□□□□ -0.72
GAPVD1-205ENST00000394084 ASIPP42127 132 aa10.56□□□□□ -0.72
GAPVD1-205ENST00000394084 SUMO2P61956 95 aaKnown RBP10.56□□□□□ -0.72
GAPVD1-205ENST00000394084 WFDC12Q8WWY7 111 aa10.56□□□□□ -0.72
GAPVD1-205ENST00000394084 LINC00477Q96M19 166 aa10.56□□□□□ -0.72
GAPVD1-205ENST00000394084 IGHV4-38-2P0DP08 117 aa10.56□□□□□ -0.72
GAPVD1-205ENST00000394084 NEGR1Q7Z3B1 354 aa10.56□□□□□ -0.72
GAPVD1-205ENST00000394084 OR5A1Q8NGJ0 315 aa10.55□□□□□ -0.72
GAPVD1-205ENST00000394084 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.55□□□□□ -0.726e-7■■■□□ 15.2
GAPVD1-205ENST00000394084 Q6ZS46 218 aa10.55□□□□□ -0.72
GAPVD1-205ENST00000394084 CHTOPQ9Y3Y2 248 aaKnown RBP10.55□□□□□ -0.72
GAPVD1-205ENST00000394084 IGHV4-61A0A0C4DH41 118 aa10.55□□□□□ -0.72
GAPVD1-205ENST00000394084 NDUFA4O00483 81 aa10.55□□□□□ -0.72
GAPVD1-205ENST00000394084 OVOL1O14753 267 aa10.55□□□□□ -0.72
GAPVD1-205ENST00000394084 PHLDA1Q8WV24 401 aaPredicted RBP10.55□□□□□ -0.72
GAPVD1-205ENST00000394084 HIST1H4GQ99525 98 aa10.55□□□□□ -0.72
GAPVD1-205ENST00000394084 DPH3P1Q9H4G8 78 aa10.55□□□□□ -0.72
GAPVD1-205ENST00000394084 COL12A1Q99715 3063 aa10.54□□□□□ -0.72
GAPVD1-205ENST00000394084 F8VRH5 84 aa10.54□□□□□ -0.72
GAPVD1-205ENST00000394084 H3BUX3 64 aa10.54□□□□□ -0.72
GAPVD1-205ENST00000394084 H7C1H1 209 aa10.54□□□□□ -0.72
GAPVD1-205ENST00000394084 SOCS3O14543 225 aa10.54□□□□□ -0.72
GAPVD1-205ENST00000394084 EDN2P20800 178 aa10.54□□□□□ -0.72
GAPVD1-205ENST00000394084 PLNP26678 52 aa10.54□□□□□ -0.72
GAPVD1-205ENST00000394084 BLCAPP62952 87 aa10.54□□□□□ -0.72
GAPVD1-205ENST00000394084 TM2D2Q9BX73 214 aa10.54□□□□□ -0.72
GAPVD1-205ENST00000394084 LENEPQ9Y5L5 61 aa10.54□□□□□ -0.72
GAPVD1-205ENST00000394084 RPL24P83731 157 aaKnown RBP10.54□□□□□ -0.72
GAPVD1-205ENST00000394084 ORMDL2Q53FV1 153 aa10.53□□□□□ -0.72
GAPVD1-205ENST00000394084 RHPN1-AS1Q9BWJ2 59 aa10.53□□□□□ -0.72
GAPVD1-205ENST00000394084 G3V4G9 280 aa10.53□□□□□ -0.72
GAPVD1-205ENST00000394084 C2orf66Q6UXQ4 117 aa10.53□□□□□ -0.72
GAPVD1-205ENST00000394084 SPOCK3Q9BQ16 436 aa10.53□□□□□ -0.72
GAPVD1-205ENST00000394084 CSTL1Q9H114 145 aa10.53□□□□□ -0.72
GAPVD1-205ENST00000394084 OR11H12B2RN74 326 aa10.52□□□□□ -0.73
GAPVD1-205ENST00000394084 GNLYP22749 145 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms