RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 FAM74A1Q5RGS3 127 aa11.8□□□□□ -0.52
SNRPA1-202ENST00000394082 OR4C5Q8NGB2 326 aa11.8□□□□□ -0.52
SNRPA1-202ENST00000394082 DMBT1Q9UGM3 2413 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-202ENST00000394082 TRAV21A0A0B4J279 112 aa11.79□□□□□ -0.52
SNRPA1-202ENST00000394082 IGHV3-16A0A0C4DH30 117 aa11.79□□□□□ -0.52
SNRPA1-202ENST00000394082 CIDEAO60543 219 aa11.79□□□□□ -0.52
SNRPA1-202ENST00000394082 CRYGDP07320 174 aa11.79□□□□□ -0.52
SNRPA1-202ENST00000394082 GCSHP23434 173 aa11.79□□□□□ -0.52
SNRPA1-202ENST00000394082 FUSP35637 526 aaKnown RBP eCLIP11.79□□□□□ -0.52
SNRPA1-202ENST00000394082 Q5VSD8 79 aa11.79□□□□□ -0.52
SNRPA1-202ENST00000394082 MED28Q9H204 178 aa11.79□□□□□ -0.52
SNRPA1-202ENST00000394082 MPC2O95563 127 aa11.78□□□□□ -0.52
SNRPA1-202ENST00000394082 PQLC2Q6ZP29 291 aa11.78□□□□□ -0.52
SNRPA1-202ENST00000394082 CMTM2Q8TAZ6 248 aa11.78□□□□□ -0.52
SNRPA1-202ENST00000394082 NTN5Q8WTR8 489 aaPredicted RBP11.78□□□□□ -0.52
SNRPA1-202ENST00000394082 KCNS1Q96KK3 526 aa11.78□□□□□ -0.52
SNRPA1-202ENST00000394082 HSPB11Q9Y547 144 aa11.78□□□□□ -0.52
SNRPA1-202ENST00000394082 SRRM2Q9UQ35 2752 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-202ENST00000394082 IGHV3-38A0A0C4DH36 116 aa11.77□□□□□ -0.53
SNRPA1-202ENST00000394082 PGPA6NDG6 321 aa11.77□□□□□ -0.53
SNRPA1-202ENST00000394082 GATA1P15976 413 aaPredicted RBP11.77□□□□□ -0.53
SNRPA1-202ENST00000394082 LINC01556Q5JQF7 62 aa11.77□□□□□ -0.53
SNRPA1-202ENST00000394082 SCGB1C1Q8TD33 95 aa11.77□□□□□ -0.53
SNRPA1-202ENST00000394082 MBD2Q9UBB5 411 aa11.77□□□□□ -0.53
SNRPA1-202ENST00000394082 MYCBP2O75592 4640 aa11.76□□□□□ -0.53
SNRPA1-202ENST00000394082 GNRH2O43555 120 aa11.76□□□□□ -0.53
SNRPA1-202ENST00000394082 PFN1P07737 140 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-202ENST00000394082 HYLS1Q96M11 299 aa11.76□□□□□ -0.53
SNRPA1-202ENST00000394082 TMEM70Q9BUB7 260 aa11.76□□□□□ -0.53
SNRPA1-202ENST00000394082 SDF2L1Q9HCN8 221 aa11.76□□□□□ -0.53
SNRPA1-202ENST00000394082 NAGKQ9UJ70 344 aa11.76□□□□□ -0.53
SNRPA1-202ENST00000394082 LRCOL1A6NCL2 159 aa11.75□□□□□ -0.53
SNRPA1-202ENST00000394082 IBA57-AS1B1ANH7 110 aa11.75□□□□□ -0.53
SNRPA1-202ENST00000394082 TYMSP04818 313 aa11.75□□□□□ -0.53
SNRPA1-202ENST00000394082 TREM1Q9NP99 234 aa11.75□□□□□ -0.53
SNRPA1-202ENST00000394082 SERTM2A0A1B0GWG4 89 aa11.74□□□□□ -0.53
SNRPA1-202ENST00000394082 RPL12P30050 165 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-202ENST00000394082 ACOT6Q3I5F7 207 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-202ENST00000394082 TVP23CQ96ET8 276 aa11.74□□□□□ -0.53
SNRPA1-202ENST00000394082 TRBV6-4A0A1B0GX49 114 aa11.73□□□□□ -0.53
SNRPA1-202ENST00000394082 A0A1W2PPV4 95 aa11.73□□□□□ -0.53
SNRPA1-202ENST00000394082 FBLL1A6NHQ2 334 aaKnown RBP11.73□□□□□ -0.53
SNRPA1-202ENST00000394082 PPT1P50897 306 aa11.73□□□□□ -0.53
SNRPA1-202ENST00000394082 GOLT1AQ6ZVE7 132 aa11.73□□□□□ -0.53
SNRPA1-202ENST00000394082 NHLRC2Q8NBF2 726 aa11.73□□□□□ -0.53
SNRPA1-202ENST00000394082 ASB13Q8WXK3 278 aa11.73□□□□□ -0.53
SNRPA1-202ENST00000394082 PTH2Q96A98 100 aa11.73□□□□□ -0.53
SNRPA1-202ENST00000394082 IGLV5-52A0A0A0MRZ9 124 aa11.72□□□□□ -0.53
SNRPA1-202ENST00000394082 TRAV8-6A0A0B4J262 113 aa11.72□□□□□ -0.53
SNRPA1-202ENST00000394082 LOC100131303A0A0U1RQF7 123 aa11.72□□□□□ -0.53
SNRPA1-202ENST00000394082 FAM229AH3BQW9 127 aa11.72□□□□□ -0.53
SNRPA1-202ENST00000394082 PSCAO43653 123 aa11.72□□□□□ -0.53
SNRPA1-202ENST00000394082 RHOHQ15669 191 aa11.72□□□□□ -0.53
SNRPA1-202ENST00000394082 SLC25A29Q8N8R3 303 aa11.72□□□□□ -0.53
SNRPA1-202ENST00000394082 PRADC1Q9BSG0 188 aa11.72□□□□□ -0.53
SNRPA1-202ENST00000394082 C1QBP02746 253 aa11.71□□□□□ -0.53
SNRPA1-202ENST00000394082 LAGE3Q14657 143 aa11.71□□□□□ -0.53
SNRPA1-202ENST00000394082 ZNF876PQ49A33 203 aa11.71□□□□□ -0.53
SNRPA1-202ENST00000394082 NDFIP1Q9BT67 221 aa11.71□□□□□ -0.53
SNRPA1-202ENST00000394082 SMIM3Q9BZL3 60 aa11.71□□□□□ -0.53
SNRPA1-202ENST00000394082 TRAV8-1A0A0A6YYK1 113 aa11.7□□□□□ -0.54
SNRPA1-202ENST00000394082 F6UZH7 168 aa11.7□□□□□ -0.54
SNRPA1-202ENST00000394082 RS1O15537 224 aa11.7□□□□□ -0.54
SNRPA1-202ENST00000394082 GIPP09681 153 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-202ENST00000394082 LELP1Q5T871 98 aa11.7□□□□□ -0.54
SNRPA1-202ENST00000394082 CFAP126Q5VTH2 177 aa11.7□□□□□ -0.54
SNRPA1-202ENST00000394082 Q8N814 137 aa11.7□□□□□ -0.54
SNRPA1-202ENST00000394082 SUN5Q8TC36 379 aa11.7□□□□□ -0.54
SNRPA1-202ENST00000394082 RPH3ALQ9UNE2 315 aa11.7□□□□□ -0.54
SNRPA1-202ENST00000394082 TAAR5O14804 337 aa11.69□□□□□ -0.54
SNRPA1-202ENST00000394082 C5orf17Q8NAS9 161 aa11.69□□□□□ -0.54
SNRPA1-202ENST00000394082 C9orf85Q96MD7 179 aa11.69□□□□□ -0.54
SNRPA1-202ENST00000394082 SH3BGRL3Q9H299 93 aa11.69□□□□□ -0.54
SNRPA1-202ENST00000394082 WFDC1Q9HC57 220 aa11.69□□□□□ -0.54
SNRPA1-202ENST00000394082 K7EQM0 130 aa11.68□□□□□ -0.54
SNRPA1-202ENST00000394082 SMR3BP02814 79 aaPredicted RBP11.68□□□□□ -0.54
SNRPA1-202ENST00000394082 MGST1P10620 155 aaKnown RBP11.68□□□□□ -0.54
SNRPA1-202ENST00000394082 OR10J3Q5JRS4 329 aa11.68□□□□□ -0.54
SNRPA1-202ENST00000394082 OR10G9Q8NGN4 311 aa11.68□□□□□ -0.54
SNRPA1-202ENST00000394082 OR10G7Q8NGN6 311 aa11.68□□□□□ -0.54
SNRPA1-202ENST00000394082 GTSF1LQ9H1H1 148 aa11.68□□□□□ -0.54
SNRPA1-202ENST00000394082 EIF3GO75821 320 aaKnown RBP eCLIP11.67□□□□□ -0.54
SNRPA1-202ENST00000394082 TCRAP04437 139 aa11.67□□□□□ -0.54
SNRPA1-202ENST00000394082 STAG3L2P0CL84 134 aa11.67□□□□□ -0.54
SNRPA1-202ENST00000394082 STAG3L3P0CL85 134 aa11.67□□□□□ -0.54
SNRPA1-202ENST00000394082 RAB2AP61019 212 aa11.67□□□□□ -0.54
SNRPA1-202ENST00000394082 GNG5P63218 68 aa11.67□□□□□ -0.54
SNRPA1-202ENST00000394082 PIK3CD-AS1Q5SR53 167 aa11.67□□□□□ -0.54
SNRPA1-202ENST00000394082 Q6ZSN1 163 aa11.67□□□□□ -0.54
SNRPA1-202ENST00000394082 OR2G3Q8NGZ4 309 aa11.67□□□□□ -0.54
SNRPA1-202ENST00000394082 ARL14EPLP0DKL9 152 aa11.66□□□□□ -0.54
SNRPA1-202ENST00000394082 DPPA3Q6W0C5 159 aa11.66□□□□□ -0.54
SNRPA1-202ENST00000394082 TM2D2Q9BX73 214 aa11.66□□□□□ -0.54
SNRPA1-202ENST00000394082 C11orf21Q9P2W6 132 aa11.66□□□□□ -0.54
SNRPA1-202ENST00000394082 DNAH8Q96JB1 4490 aa11.66□□□□□ -0.54
SNRPA1-202ENST00000394082 CDC34P49427 236 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-202ENST00000394082 ZNF80P51504 273 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-202ENST00000394082 ZFP2Q6ZN57 461 aa11.65□□□□□ -0.54
SNRPA1-202ENST00000394082 INO80EQ8NBZ0 244 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-202ENST00000394082 OR2T35Q8NGX2 323 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms