RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TYMSP04818 313 aa10.18□□□□□ -0.78
CHMP3-202ENST00000393773 IGHV3-30-3P0DP02 117 aa10.18□□□□□ -0.78
CHMP3-202ENST00000393773 IGHV3-30-5P0DP03 117 aa10.18□□□□□ -0.78
CHMP3-202ENST00000393773 CSN1S1P47710 185 aa10.18□□□□□ -0.78
CHMP3-202ENST00000393773 KRTAP10-4P60372 401 aaPredicted RBP10.18□□□□□ -0.78
CHMP3-202ENST00000393773 RANP62826 216 aaKnown RBP10.18□□□□□ -0.78
CHMP3-202ENST00000393773 UBE2L3P68036 154 aaKnown RBP10.18□□□□□ -0.78
CHMP3-202ENST00000393773 OR5C1Q8NGR4 320 aa10.18□□□□□ -0.78
CHMP3-202ENST00000393773 DEFB104AQ8WTQ1 72 aa10.18□□□□□ -0.78
CHMP3-202ENST00000393773 TMED6Q8WW62 240 aa10.18□□□□□ -0.78
CHMP3-202ENST00000393773 TRAV8-6A0A0B4J262 113 aa10.17□□□□□ -0.78
CHMP3-202ENST00000393773 FBLL1A6NHQ2 334 aaKnown RBP10.17□□□□□ -0.78
CHMP3-202ENST00000393773 GNRH2O43555 120 aa10.17□□□□□ -0.78
CHMP3-202ENST00000393773 NHLH2Q02577 135 aa10.17□□□□□ -0.78
CHMP3-202ENST00000393773 OR10J3Q5JRS4 329 aa10.17□□□□□ -0.78
CHMP3-202ENST00000393773 LELP1Q5T871 98 aa10.17□□□□□ -0.78
CHMP3-202ENST00000393773 SLC25A29Q8N8R3 303 aa10.17□□□□□ -0.78
CHMP3-202ENST00000393773 KCNIP2Q9NS61 270 aa10.17□□□□□ -0.78
CHMP3-202ENST00000393773 Q8N3U1 123 aa10.16□□□□□ -0.78
CHMP3-202ENST00000393773 WDR61Q9GZS3 305 aaKnown RBP10.16□□□□□ -0.78
CHMP3-202ENST00000393773 BOLA1Q9Y3E2 137 aa10.16□□□□□ -0.78
CHMP3-202ENST00000393773 PFN1P07737 140 aaKnown RBP10.15□□□□□ -0.78
CHMP3-202ENST00000393773 RHOHQ15669 191 aa10.15□□□□□ -0.78
CHMP3-202ENST00000393773 DPPA3Q6W0C5 159 aa10.15□□□□□ -0.78
CHMP3-202ENST00000393773 SCXQ7RTU7 201 aa10.15□□□□□ -0.78
CHMP3-202ENST00000393773 F6UZH7 168 aa10.14□□□□□ -0.79
CHMP3-202ENST00000393773 SERTAD4-AS1Q5TG53 156 aa10.14□□□□□ -0.79
CHMP3-202ENST00000393773 CFAP126Q5VTH2 177 aa10.14□□□□□ -0.79
CHMP3-202ENST00000393773 TVP23CQ96ET8 276 aa10.14□□□□□ -0.79
CHMP3-202ENST00000393773 SDF2L1Q9HCN8 221 aa10.14□□□□□ -0.79
CHMP3-202ENST00000393773 TRAV21A0A0B4J279 112 aa10.13□□□□□ -0.79
CHMP3-202ENST00000393773 TRBV6-4A0A1B0GX49 114 aa10.13□□□□□ -0.79
CHMP3-202ENST00000393773 LECT2O14960 151 aa10.13□□□□□ -0.79
CHMP3-202ENST00000393773 RS1O15537 224 aa10.13□□□□□ -0.79
CHMP3-202ENST00000393773 KHDC3LQ587J8 217 aa10.13□□□□□ -0.79
CHMP3-202ENST00000393773 PRADC1Q9BSG0 188 aa10.13□□□□□ -0.79
CHMP3-202ENST00000393773 TM2D2Q9BX73 214 aa10.13□□□□□ -0.79
CHMP3-202ENST00000393773 OR5AC2Q9NZP5 309 aa10.13□□□□□ -0.79
CHMP3-202ENST00000393773 RPH3ALQ9UNE2 315 aa10.13□□□□□ -0.79
CHMP3-202ENST00000393773 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.12□□□□□ -0.79
CHMP3-202ENST00000393773 TRAV8-1A0A0A6YYK1 113 aa10.12□□□□□ -0.79
CHMP3-202ENST00000393773 LINC00694P0DN24 101 aa10.12□□□□□ -0.79
CHMP3-202ENST00000393773 HYLS1Q96M11 299 aa10.12□□□□□ -0.79
CHMP3-202ENST00000393773 GTSF1LQ9H1H1 148 aa10.12□□□□□ -0.79
CHMP3-202ENST00000393773 OTORQ9NRC9 128 aa10.12□□□□□ -0.79
CHMP3-202ENST00000393773 C17orf112F2Z3M2 114 aa10.11□□□□□ -0.79
CHMP3-202ENST00000393773 H2AFB2P0C5Z0 115 aa10.11□□□□□ -0.79
CHMP3-202ENST00000393773 ZNF876PQ49A33 203 aa10.11□□□□□ -0.79
CHMP3-202ENST00000393773 LINC01620Q4KN68 170 aa10.11□□□□□ -0.79
CHMP3-202ENST00000393773 GOLT1AQ6ZVE7 132 aa10.11□□□□□ -0.79
CHMP3-202ENST00000393773 SYT8Q8NBV8 401 aa10.11□□□□□ -0.79
CHMP3-202ENST00000393773 ASB13Q8WXK3 278 aa10.11□□□□□ -0.79
CHMP3-202ENST00000393773 KCNS1Q96KK3 526 aa10.11□□□□□ -0.79
CHMP3-202ENST00000393773 ATP5SQ99766 215 aa10.11□□□□□ -0.79
CHMP3-202ENST00000393773 IGHV3-73A0A0B4J1V6 119 aa10.1□□□□□ -0.79
CHMP3-202ENST00000393773 H0YIZ8 118 aa10.1□□□□□ -0.79
CHMP3-202ENST00000393773 CIDEAO60543 219 aa10.1□□□□□ -0.79
CHMP3-202ENST00000393773 EIF3GO75821 320 aaKnown RBP eCLIP10.1□□□□□ -0.79
CHMP3-202ENST00000393773 FFAR4Q5NUL3 377 aa10.1□□□□□ -0.79
CHMP3-202ENST00000393773 ATP6V0E2Q8NHE4 81 aa10.1□□□□□ -0.79
CHMP3-202ENST00000393773 C9orf85Q96MD7 179 aa10.1□□□□□ -0.79
CHMP3-202ENST00000393773 TREM1Q9NP99 234 aa10.1□□□□□ -0.79
CHMP3-202ENST00000393773 C11orf21Q9P2W6 132 aa10.1□□□□□ -0.79
CHMP3-202ENST00000393773 PGPA6NDG6 321 aa10.09□□□□□ -0.79
CHMP3-202ENST00000393773 TAS2R45P59539 299 aa10.09□□□□□ -0.79
CHMP3-202ENST00000393773 ZNF506Q5JVG8 444 aa10.09□□□□□ -0.79
CHMP3-202ENST00000393773 CMTM2Q8TAZ6 248 aa10.09□□□□□ -0.79
CHMP3-202ENST00000393773 TRAV8-3A0A0A6YYJ7 113 aa10.08□□□□□ -0.8
CHMP3-202ENST00000393773 SIX6O95475 246 aa10.08□□□□□ -0.8
CHMP3-202ENST00000393773 OXTP01178 125 aa10.08□□□□□ -0.8
CHMP3-202ENST00000393773 MGST1P10620 155 aaKnown RBP10.08□□□□□ -0.8
CHMP3-202ENST00000393773 ZNF80P51504 273 aaPredicted RBP10.08□□□□□ -0.8
CHMP3-202ENST00000393773 GNG5P63218 68 aa10.08□□□□□ -0.8
CHMP3-202ENST00000393773 LRRC37A5PQ49AS3 106 aa10.08□□□□□ -0.8
CHMP3-202ENST00000393773 DAZ4Q86SG3 579 aaKnown RBP10.08□□□□□ -0.8
CHMP3-202ENST00000393773 ARL6IP6Q8N6S5 226 aa10.08□□□□□ -0.8
CHMP3-202ENST00000393773 CHAC1Q9BUX1 264 aa10.08□□□□□ -0.8
CHMP3-202ENST00000393773 NMES1Q9C002 83 aa10.08□□□□□ -0.8
CHMP3-202ENST00000393773 DAZ3Q9NR90 486 aaKnown RBP10.08□□□□□ -0.8
CHMP3-202ENST00000393773 PGPEP1LA6NFU8 196 aa10.07□□□□□ -0.8
CHMP3-202ENST00000393773 FAM74A1Q5RGS3 127 aa10.07□□□□□ -0.8
CHMP3-202ENST00000393773 TMEM75Q8N9X5 138 aa10.07□□□□□ -0.8
CHMP3-202ENST00000393773 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
CHMP3-202ENST00000393773 PTH2Q96A98 100 aa10.07□□□□□ -0.8
CHMP3-202ENST00000393773 MBD2Q9UBB5 411 aa10.07□□□□□ -0.8
CHMP3-202ENST00000393773 PLA2G2DQ9UNK4 145 aa10.07□□□□□ -0.8
CHMP3-202ENST00000393773 ASAH1Q13510 395 aa10.06□□□□□ -0.8
CHMP3-202ENST00000393773 TOR2AQ5JU69 321 aa10.06□□□□□ -0.8
CHMP3-202ENST00000393773 RNASE3P12724 160 aaKnown RBP10.05□□□□□ -0.8
CHMP3-202ENST00000393773 CIRBP-AS1Q8TBR5 109 aa10.05□□□□□ -0.8
CHMP3-202ENST00000393773 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
CHMP3-202ENST00000393773 SGK494Q96LW2 274 aa10.05□□□□□ -0.8
CHMP3-202ENST00000393773 PARLQ9H300 379 aa10.05□□□□□ -0.8
CHMP3-202ENST00000393773 HSPB11Q9Y547 144 aa10.05□□□□□ -0.8
CHMP3-202ENST00000393773 FAM240BA0A1B0GVZ2 78 aa10.04□□□□□ -0.8
CHMP3-202ENST00000393773 GAGE12JA6NER3 117 aa10.04□□□□□ -0.8
CHMP3-202ENST00000393773 GAGE1Q13065 139 aa10.04□□□□□ -0.8
CHMP3-202ENST00000393773 GAGE4Q13068 117 aa10.04□□□□□ -0.8
CHMP3-202ENST00000393773 GAGE5Q13069 117 aa10.04□□□□□ -0.8
CHMP3-202ENST00000393773 GAGE13Q4V321 117 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms