RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 SSBP4Q9BWG4 385 aaPredicted RBP9.53□□□□□ -0.88
USP44-202ENST00000393091 SDF2L1Q9HCN8 221 aa9.53□□□□□ -0.88
USP44-202ENST00000393091 TRAV12-3A0A0B4J271 114 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 TCL1AP56279 114 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 LGALS9BQ3B8N2 356 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 WDR73Q6P4I2 378 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 OCC1Q8TAD7 63 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 SPXQ9BT56 116 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 SEC11CQ9BY50 192 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 NOTCH1P46531 2555 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 IGHV3-16A0A0C4DH30 117 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 NXPH4O95158 308 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 RPS20P60866 119 aaKnown RBP9.52□□□□□ -0.89
USP44-202ENST00000393091 PNRC1Q12796 327 aaPredicted RBP9.52□□□□□ -0.89
USP44-202ENST00000393091 NDUFA5Q16718 116 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 COMMD7Q86VX2 200 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 OSTCQ9NRP0 149 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 CARHSP1Q9Y2V2 147 aaKnown RBP9.52□□□□□ -0.89
USP44-202ENST00000393091 U3KQK5 164 aa9.52□□□□□ -0.89
USP44-202ENST00000393091 IGKV3D-20A0A0C4DH25 116 aa9.51□□□□□ -0.89
USP44-202ENST00000393091 TMEM218A2RU14 115 aa9.51□□□□□ -0.89
USP44-202ENST00000393091 FOXA3P55318 350 aaPredicted RBP9.51□□□□□ -0.89
USP44-202ENST00000393091 TMEM241Q24JQ0 296 aa9.51□□□□□ -0.89
USP44-202ENST00000393091 FAM231BA6NCW3 169 aa9.51□□□□□ -0.89
USP44-202ENST00000393091 SNAI2O43623 268 aa9.51□□□□□ -0.89
USP44-202ENST00000393091 SFTA3P0C7M3 94 aa9.51□□□□□ -0.89
USP44-202ENST00000393091 ISOC2Q96AB3 205 aa9.51□□□□□ -0.89
USP44-202ENST00000393091 SMIM7Q9BQ49 75 aa9.51□□□□□ -0.89
USP44-202ENST00000393091 IGHV4-28A0A0C4DH34 117 aa9.51□□□□□ -0.89
USP44-202ENST00000393091 SPINK4O60575 86 aa9.51□□□□□ -0.89
USP44-202ENST00000393091 TYMSP04818 313 aa9.5□□□□□ -0.89
USP44-202ENST00000393091 LINC01587Q99440 93 aa9.5□□□□□ -0.89
USP44-202ENST00000393091 GFRA4Q9GZZ7 299 aa9.5□□□□□ -0.89
USP44-202ENST00000393091 ZNF727A8MUV8 499 aa9.5□□□□□ -0.89
USP44-202ENST00000393091 RRN3P1Q2M238 152 aa9.5□□□□□ -0.89
USP44-202ENST00000393091 SOHLH1Q5JUK2 328 aa9.5□□□□□ -0.89
USP44-202ENST00000393091 IL36BQ9NZH7 164 aa9.5□□□□□ -0.89
USP44-202ENST00000393091 IGHV4-4A0A075B6R2 117 aa9.49□□□□□ -0.89
USP44-202ENST00000393091 CIDEAO60543 219 aa9.49□□□□□ -0.89
USP44-202ENST00000393091 RPL23P62829 140 aaKnown RBP9.49□□□□□ -0.89
USP44-202ENST00000393091 FAM159AQ6UWV7 190 aa9.49□□□□□ -0.89
USP44-202ENST00000393091 SGK494Q96LW2 274 aa9.49□□□□□ -0.89
USP44-202ENST00000393091 CNFNQ9BYD5 112 aa9.49□□□□□ -0.89
USP44-202ENST00000393091 RETNQ9HD89 108 aa9.49□□□□□ -0.89
USP44-202ENST00000393091 OR5AL1P0C617 328 aa9.49□□□□□ -0.89
USP44-202ENST00000393091 IGLC6P0CF74 106 aa9.49□□□□□ -0.89
USP44-202ENST00000393091 ZNF415Q09FC8 603 aa9.49□□□□□ -0.89
USP44-202ENST00000393091 Q6ZQT7 251 aa9.49□□□□□ -0.89
USP44-202ENST00000393091 ADCYAP1P18509 176 aa9.48□□□□□ -0.89
USP44-202ENST00000393091 AZU1P20160 251 aa9.48□□□□□ -0.89
USP44-202ENST00000393091 RASL10AQ92737 203 aa9.48□□□□□ -0.89
USP44-202ENST00000393091 DKK2Q9UBU2 259 aa9.48□□□□□ -0.89
USP44-202ENST00000393091 B4DEV8 164 aa9.48□□□□□ -0.89
USP44-202ENST00000393091 RNASE3P12724 160 aaKnown RBP9.48□□□□□ -0.89
USP44-202ENST00000393091 ZNF705GA8MUZ8 300 aaPredicted RBP9.47□□□□□ -0.89
USP44-202ENST00000393091 NUDT10Q8NFP7 164 aa9.47□□□□□ -0.89
USP44-202ENST00000393091 NUDT11Q96G61 164 aa9.47□□□□□ -0.89
USP44-202ENST00000393091 PRB4P10163 310 aaPredicted RBP9.47□□□□□ -0.89
USP44-202ENST00000393091 RPP21Q9H633 154 aaKnown RBP9.46□□□□□ -0.89
USP44-202ENST00000393091 TIMM8BQ9Y5J9 83 aaPredicted RBP9.46□□□□□ -0.89
USP44-202ENST00000393091 CTRLP40313 264 aa9.46□□□□□ -0.9
USP44-202ENST00000393091 V9GYV3 84 aa9.45□□□□□ -0.9
USP44-202ENST00000393091 CBY3A6NI87 242 aa9.45□□□□□ -0.9
USP44-202ENST00000393091 PPP1R2P9O14990 202 aa9.45□□□□□ -0.9
USP44-202ENST00000393091 IMMP2LQ96T52 175 aa9.45□□□□□ -0.9
USP44-202ENST00000393091 TMEM208Q9BTX3 173 aa9.45□□□□□ -0.9
USP44-202ENST00000393091 TMEM242Q9NWH2 141 aa9.45□□□□□ -0.9
USP44-202ENST00000393091 XKRY2A2RUG3 117 aa9.45□□□□□ -0.9
USP44-202ENST00000393091 M0R2P5 195 aa9.45□□□□□ -0.9
USP44-202ENST00000393091 ASIPP42127 132 aa9.45□□□□□ -0.9
USP44-202ENST00000393091 NHLRC2Q8NBF2 726 aa9.45□□□□□ -0.9
USP44-202ENST00000393091 SFRP2Q96HF1 295 aa9.45□□□□□ -0.9
USP44-202ENST00000393091 A0A1W2PPQ1 181 aa9.44□□□□□ -0.9
USP44-202ENST00000393091 PGPEP1LA6NFU8 196 aa9.44□□□□□ -0.9
USP44-202ENST00000393091 F2Z2F3 143 aa9.44□□□□□ -0.9
USP44-202ENST00000393091 P01737 135 aa9.44□□□□□ -0.9
USP44-202ENST00000393091 SPART-AS1P0CW21 52 aa9.44□□□□□ -0.9
USP44-202ENST00000393091 A0A0J9YWU9 116 aa9.44□□□□□ -0.9
USP44-202ENST00000393091 UFSP1Q6NVU6 142 aa9.44□□□□□ -0.9
USP44-202ENST00000393091 ANAPC16Q96DE5 110 aa9.44□□□□□ -0.9
USP44-202ENST00000393091 A0A087WWC5 75 aa9.43□□□□□ -0.9
USP44-202ENST00000393091 SMIM27A0A1W2PRY6 76 aa9.43□□□□□ -0.9
USP44-202ENST00000393091 GNRH2O43555 120 aa9.43□□□□□ -0.9
USP44-202ENST00000393091 FAM210BQ96KR6 192 aa9.43□□□□□ -0.9
USP44-202ENST00000393091 MDFICQ9P1T7 246 aa9.43□□□□□ -0.9
USP44-202ENST00000393091 CACNG7P62955 275 aa9.43□□□□□ -0.9
USP44-202ENST00000393091 OR5I1Q13606 314 aa9.43□□□□□ -0.9
USP44-202ENST00000393091 POM121L12Q8N7R1 296 aa9.43□□□□□ -0.9
USP44-202ENST00000393091 GATD1Q8NB37 220 aa9.43□□□□□ -0.9
USP44-202ENST00000393091 TSKUQ8WUA8 353 aa9.43□□□□□ -0.9
USP44-202ENST00000393091 DAZAP1Q96EP5 407 aaKnown RBP9.43□□□□□ -0.9
USP44-202ENST00000393091 SNURFLB1AK76 121 aa9.42□□□□□ -0.9
USP44-202ENST00000393091 ZFP2Q6ZN57 461 aa9.42□□□□□ -0.9
USP44-202ENST00000393091 CTDSP1Q9GZU7 261 aa9.42□□□□□ -0.9
USP44-202ENST00000393091 H3BNG1 76 aa9.42□□□□□ -0.9
USP44-202ENST00000393091 J3KRW8 73 aa9.42□□□□□ -0.9
USP44-202ENST00000393091 RS1O15537 224 aa9.42□□□□□ -0.9
USP44-202ENST00000393091 MGST1P10620 155 aaKnown RBP9.42□□□□□ -0.9
USP44-202ENST00000393091 A8MWL6 223 aa9.41□□□□□ -0.9
USP44-202ENST00000393091 C12orf74Q32Q52 190 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms