RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SAA2P0DJI9 122 aaPredicted RBP6.01□□□□□ -1.45
VTI1A-201ENST00000393077 CIRBPQ14011 172 aaKnown RBP6.01□□□□□ -1.45
VTI1A-201ENST00000393077 TMEM133Q9H2Q1 129 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 FAM208BQ5VWN6 2430 aa6.01□□□□□ -1.45
VTI1A-201ENST00000393077 GATA1P15976 413 aaPredicted RBP6.01□□□□□ -1.45
VTI1A-201ENST00000393077 IGKV1OR2-108A0A075B7D4 117 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 KNCNA6PVL3 124 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 TNFRSF13BO14836 293 aaPredicted RBP6□□□□□ -1.45
VTI1A-201ENST00000393077 UBE2D3P61077 147 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 UBE2D2P62837 147 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 MLST8Q9BVC4 326 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 TLN1Q9Y490 2541 aaKnown RBP6□□□□□ -1.45
VTI1A-201ENST00000393077 FAM236DA0A1B0GTK5 79 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 RBMY1BA6NDE4 496 aaKnown RBP6□□□□□ -1.45
VTI1A-201ENST00000393077 RBMY1EA6NEQ0 496 aaKnown RBP6□□□□□ -1.45
VTI1A-201ENST00000393077 RBMY1DP0C7P1 496 aaKnown RBP6□□□□□ -1.45
VTI1A-201ENST00000393077 RBMY1A1P0DJD3 496 aaKnown RBP6□□□□□ -1.45
VTI1A-201ENST00000393077 RBMY1CP0DJD4 496 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 FAM236CP0DP71 79 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 RBMY1FQ15415 496 aaKnown RBP6□□□□□ -1.45
VTI1A-201ENST00000393077 C2orf66Q6UXQ4 117 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 RNF182Q8N6D2 247 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 PHLDA3Q9Y5J5 127 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 LY6DQ14210 128 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 ZNRF2Q8NHG8 242 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 C8orf49Q96NF6 230 aa6□□□□□ -1.45
VTI1A-201ENST00000393077 EML6Q6ZMW3 1958 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 CGB1A6NKQ9 187 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 TNFAIP6P98066 277 aaPredicted RBP5.99□□□□□ -1.45
VTI1A-201ENST00000393077 MBD3L2Q8NHZ7 208 aaPredicted RBP5.99□□□□□ -1.45
VTI1A-201ENST00000393077 C16orf97H3BN30 126 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 J3QQQ9 107 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 PPP1R17O96001 155 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 CRYGBP07316 175 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 CCL8P80075 99 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 TMEM75Q8N9X5 138 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 METTL26Q96S19 204 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 RPUSD1Q9UJJ7 312 aaKnown RBP5.99□□□□□ -1.45
VTI1A-201ENST00000393077 TRANK1O15050 2925 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 IGKV2-40A0A087WW87 121 aaPredicted RBP5.99□□□□□ -1.45
VTI1A-201ENST00000393077 A0A096LNJ9 63 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 IGKV3D-7A0A0C4DH55 119 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 LINC01548A6NM66 108 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 IGKV2D-40P01614 121 aaPredicted RBP5.99□□□□□ -1.45
VTI1A-201ENST00000393077 C10orf55Q5SWW7 151 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 DTX2Q86UW9 622 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 EEF1AKMT3Q96AZ1 226 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 PLEKHB2Q96CS7 222 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 C20orf173Q96LM9 149 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 ODF3Q96PU9 254 aa5.99□□□□□ -1.45
VTI1A-201ENST00000393077 RHOHQ15669 191 aa5.98□□□□□ -1.45
VTI1A-201ENST00000393077 S100A7L2Q5SY68 101 aa5.98□□□□□ -1.45
VTI1A-201ENST00000393077 GGNQ86UU5 652 aa5.98□□□□□ -1.45
VTI1A-201ENST00000393077 ZNRF1Q8ND25 227 aa5.98□□□□□ -1.45
VTI1A-201ENST00000393077 Q8TAT8 98 aa5.98□□□□□ -1.45
VTI1A-201ENST00000393077 CRIP2P52943 208 aaPredicted RBP5.98□□□□□ -1.45
VTI1A-201ENST00000393077 ATRXP46100 2492 aa5.98□□□□□ -1.45
VTI1A-201ENST00000393077 XIRP2A4UGR9 3374 aa5.98□□□□□ -1.45
VTI1A-201ENST00000393077 WI2-2373I1.2A0A1W2PRP0 233 aa5.98□□□□□ -1.45
VTI1A-201ENST00000393077 LINC01619G3V211 115 aa5.98□□□□□ -1.45
VTI1A-201ENST00000393077 PATE2Q6UY27 113 aa5.98□□□□□ -1.45
VTI1A-201ENST00000393077 SPTBN4Q9H254 2564 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 TRAV26-2A0A0B4J265 109 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 UBE2D1P51668 147 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 BAALCQ8WXS3 180 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 C11orf68Q9H3H3 251 aaKnown RBP5.97□□□□□ -1.45
VTI1A-201ENST00000393077 MSRB1Q9NZV6 116 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 SRRM4A7MD48 611 aaKnown RBP5.97□□□□□ -1.45
VTI1A-201ENST00000393077 INS-IGF2F8WCM5 200 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 MUSTN1Q8IVN3 82 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 ZCCHC24Q8N2G6 241 aaKnown RBP5.97□□□□□ -1.45
VTI1A-201ENST00000393077 SLC25A15Q9Y619 301 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 SERP2Q8N6R1 65 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 DEFB104AQ8WTQ1 72 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 CCL17Q92583 94 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 SZT2Q5T011 3432 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 IGHV3-72A0A0B4J1Y9 119 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 TRAV12-1A0A0B4J245 112 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 FAM240AA0A1B0GVK7 77 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 OVOL1O14753 267 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 ZNF22P17026 224 aaPredicted RBP5.97□□□□□ -1.45
VTI1A-201ENST00000393077 NSUN5P1Q3KNT7 163 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 PLA2G2CQ5R387 149 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 PRR25Q96S07 402 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 SMIM2Q9BVW6 85 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 ICOSQ9Y6W8 199 aa5.97□□□□□ -1.45
VTI1A-201ENST00000393077 NOTCH2Q04721 2471 aa5.96□□□□□ -1.45
VTI1A-201ENST00000393077 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.96□□□□□ -1.451e-6■■■■□ 25
VTI1A-201ENST00000393077 BRWD1-AS2P59051 145 aa5.96□□□□□ -1.45
VTI1A-201ENST00000393077 LYPD1Q8N2G4 141 aa5.96□□□□□ -1.45
VTI1A-201ENST00000393077 CLEC2BQ92478 149 aa5.96□□□□□ -1.45
VTI1A-201ENST00000393077 DPH3Q96FX2 82 aa5.96□□□□□ -1.45
VTI1A-201ENST00000393077 CREBBPQ92793 2442 aa5.96□□□□□ -1.46
VTI1A-201ENST00000393077 IGHV3-33P01772 117 aa5.96□□□□□ -1.46
VTI1A-201ENST00000393077 RETNQ9HD89 108 aa5.96□□□□□ -1.46
VTI1A-201ENST00000393077 SPRR3Q9UBC9 169 aa5.96□□□□□ -1.46
VTI1A-201ENST00000393077 PTPRQQ9UMZ3 2332 aa5.96□□□□□ -1.46
VTI1A-201ENST00000393077 P0DMU3 169 aa5.96□□□□□ -1.46
VTI1A-201ENST00000393077 FAM231AP0DMU4 169 aa5.96□□□□□ -1.46
VTI1A-201ENST00000393077 FAM231CP0DMU5 169 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms