RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 TMEM160Q9NX00 188 aa11.6□□□□□ -0.55
SHTN1-204ENST00000392903 ACACBO00763 2458 aa11.6□□□□□ -0.55
SHTN1-204ENST00000392903 TRBV7-3A0A075B6L6 115 aa11.59□□□□□ -0.55
SHTN1-204ENST00000392903 APOMO95445 188 aa11.59□□□□□ -0.55
SHTN1-204ENST00000392903 FOXI1Q12951 378 aa11.59□□□□□ -0.55
SHTN1-204ENST00000392903 ZNF418Q8TF45 676 aaPredicted RBP11.59□□□□□ -0.55
SHTN1-204ENST00000392903 C20orf78Q9BR46 151 aa11.59□□□□□ -0.55
SHTN1-204ENST00000392903 MRPL35Q9NZE8 188 aaKnown RBP11.59□□□□□ -0.55
SHTN1-204ENST00000392903 MSRB1Q9NZV6 116 aa11.59□□□□□ -0.55
SHTN1-204ENST00000392903 MYO18BQ8IUG5 2567 aa11.59□□□□□ -0.55
SHTN1-204ENST00000392903 C8orf86Q6ZUL3 223 aa11.59□□□□□ -0.55
SHTN1-204ENST00000392903 Q8N6K4 173 aa11.59□□□□□ -0.55
SHTN1-204ENST00000392903 Q8N8P6 123 aa11.59□□□□□ -0.55
SHTN1-204ENST00000392903 ZNF48Q96MX3 618 aaPredicted RBP11.59□□□□□ -0.55
SHTN1-204ENST00000392903 PSMG3-AS1Q96PY0 264 aa11.59□□□□□ -0.55
SHTN1-204ENST00000392903 C1QTNF4Q9BXJ3 329 aa11.59□□□□□ -0.55
SHTN1-204ENST00000392903 USP9XQ93008 2570 aaPredicted RBP11.58□□□□□ -0.55
SHTN1-204ENST00000392903 IGHV3OR16-8A0A075B7F1 116 aa11.58□□□□□ -0.56
SHTN1-204ENST00000392903 IGHV3-35A0A0C4DH35 117 aa11.58□□□□□ -0.56
SHTN1-204ENST00000392903 MFAP4P55083 255 aa11.58□□□□□ -0.56
SHTN1-204ENST00000392903 CDIP1Q9H305 208 aa11.58□□□□□ -0.56
SHTN1-204ENST00000392903 IGLV2-18A0A075B6J9 118 aa11.58□□□□□ -0.56
SHTN1-204ENST00000392903 IGKV2-40A0A087WW87 121 aaPredicted RBP11.58□□□□□ -0.56
SHTN1-204ENST00000392903 F8W735 103 aaPredicted RBP11.58□□□□□ -0.56
SHTN1-204ENST00000392903 IGKV2D-40P01614 121 aaPredicted RBP11.58□□□□□ -0.56
SHTN1-204ENST00000392903 SAA4P35542 130 aa11.58□□□□□ -0.56
SHTN1-204ENST00000392903 ZNF80P51504 273 aaPredicted RBP11.58□□□□□ -0.56
SHTN1-204ENST00000392903 LMO4P61968 165 aa11.58□□□□□ -0.56
SHTN1-204ENST00000392903 MINOS1Q5TGZ0 78 aa11.58□□□□□ -0.56
SHTN1-204ENST00000392903 LCNL1Q6ZST4 164 aa11.58□□□□□ -0.56
SHTN1-204ENST00000392903 CYSLTR1Q9Y271 337 aa11.58□□□□□ -0.56
SHTN1-204ENST00000392903 MINOS1-NBL1R4GNA1 71 aa11.58□□□□□ -0.56
SHTN1-204ENST00000392903 IGHV7-81A0A0B4J1V7 117 aa11.57□□□□□ -0.56
SHTN1-204ENST00000392903 C21orf62Q9NYP8 219 aa11.57□□□□□ -0.56
SHTN1-204ENST00000392903 Q8N9W7 124 aa11.57□□□□□ -0.56
SHTN1-204ENST00000392903 ABCA2Q9BZC7 2435 aa11.57□□□□□ -0.56
SHTN1-204ENST00000392903 CENPEQ02224 2701 aa11.56□□□□□ -0.56
SHTN1-204ENST00000392903 A0A087WX48 190 aa11.56□□□□□ -0.56
SHTN1-204ENST00000392903 PLNP26678 52 aa11.56□□□□□ -0.56
SHTN1-204ENST00000392903 EBI3Q14213 229 aa11.56□□□□□ -0.56
SHTN1-204ENST00000392903 CFAP126Q5VTH2 177 aa11.56□□□□□ -0.56
SHTN1-204ENST00000392903 SYT8Q8NBV8 401 aa11.56□□□□□ -0.56
SHTN1-204ENST00000392903 AJUBAQ96IF1 538 aa11.56□□□□□ -0.56
SHTN1-204ENST00000392903 CSMD2Q7Z408 3487 aa11.56□□□□□ -0.56
SHTN1-204ENST00000392903 IGHV3OR16-10A0A075B7F0 116 aa11.56□□□□□ -0.56
SHTN1-204ENST00000392903 OOSP1A8MZH6 123 aa11.56□□□□□ -0.56
SHTN1-204ENST00000392903 UBE2E1P51965 193 aa11.56□□□□□ -0.56
SHTN1-204ENST00000392903 MORN3Q6PF18 240 aaPredicted RBP11.56□□□□□ -0.56
SHTN1-204ENST00000392903 MYOZ3Q8TDC0 251 aa11.56□□□□□ -0.56
SHTN1-204ENST00000392903 ZFYVE26Q68DK2 2539 aa11.55□□□□□ -0.56
SHTN1-204ENST00000392903 SPINK8P0C7L1 97 aa11.55□□□□□ -0.56
SHTN1-204ENST00000392903 ECSCRQ19T08 205 aa11.55□□□□□ -0.56
SHTN1-204ENST00000392903 GATA1P15976 413 aaPredicted RBP11.55□□□□□ -0.56
SHTN1-204ENST00000392903 LINC01548A6NM66 108 aa11.54□□□□□ -0.56
SHTN1-204ENST00000392903 Q8TAT8 98 aa11.54□□□□□ -0.56
SHTN1-204ENST00000392903 HOXA3O43365 443 aaPredicted RBP11.54□□□□□ -0.56
SHTN1-204ENST00000392903 TSPAN13O95857 204 aa11.54□□□□□ -0.56
SHTN1-204ENST00000392903 IGHV4-39P01824 125 aa11.54□□□□□ -0.56
SHTN1-204ENST00000392903 ORM1P02763 201 aa11.54□□□□□ -0.56
SHTN1-204ENST00000392903 CTSGP08311 255 aa11.54□□□□□ -0.56
SHTN1-204ENST00000392903 SMCPP49901 116 aaPredicted RBP11.54□□□□□ -0.56
SHTN1-204ENST00000392903 MYMXA0A1B0GTQ4 84 aa11.53□□□□□ -0.56
SHTN1-204ENST00000392903 PPIFP30405 207 aaKnown RBP11.53□□□□□ -0.56
SHTN1-204ENST00000392903 LAGE3Q14657 143 aa11.53□□□□□ -0.56
SHTN1-204ENST00000392903 Q6ZUT4 128 aa11.52□□□□□ -0.56
SHTN1-204ENST00000392903 NFE4Q86UQ8 179 aa11.52□□□□□ -0.56
SHTN1-204ENST00000392903 DLX4Q92988 240 aaPredicted RBP11.52□□□□□ -0.56
SHTN1-204ENST00000392903 FABP5P3A8MUU1 101 aa11.52□□□□□ -0.57
SHTN1-204ENST00000392903 G3V318 75 aa11.52□□□□□ -0.57
SHTN1-204ENST00000392903 ATP6V0E1O15342 81 aa11.52□□□□□ -0.57
SHTN1-204ENST00000392903 IGFL4Q6B9Z1 124 aa11.52□□□□□ -0.57
SHTN1-204ENST00000392903 PGPEP1Q9NXJ5 209 aa11.52□□□□□ -0.57
SHTN1-204ENST00000392903 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.52□□□□□ -0.572e-7■■■■■ 29.6
SHTN1-204ENST00000392903 CENPVL3A0A0U1RRI6 287 aa11.51□□□□□ -0.57
SHTN1-204ENST00000392903 MT-ATP8P03928 68 aa11.51□□□□□ -0.57
SHTN1-204ENST00000392903 C15orf32Q32M92 178 aa11.51□□□□□ -0.57
SHTN1-204ENST00000392903 TMEM219Q86XT9 240 aa11.51□□□□□ -0.57
SHTN1-204ENST00000392903 DOPEY1Q5JWR5 2465 aa11.51□□□□□ -0.57
SHTN1-204ENST00000392903 TRAV12-1A0A0B4J245 112 aa11.51□□□□□ -0.57
SHTN1-204ENST00000392903 OR11H12B2RN74 326 aa11.51□□□□□ -0.57
SHTN1-204ENST00000392903 NPFFO15130 113 aa11.51□□□□□ -0.57
SHTN1-204ENST00000392903 RPL7P18124 248 aaKnown RBP11.51□□□□□ -0.57
SHTN1-204ENST00000392903 FHL3Q13643 280 aa11.51□□□□□ -0.57
SHTN1-204ENST00000392903 OR11H1Q8NG94 326 aa11.51□□□□□ -0.57
SHTN1-204ENST00000392903 OR11H2Q8NH07 326 aa11.51□□□□□ -0.57
SHTN1-204ENST00000392903 F8VRH5 84 aa11.5□□□□□ -0.57
SHTN1-204ENST00000392903 IGHG4P01861 327 aa11.5□□□□□ -0.57
SHTN1-204ENST00000392903 NRACQ8N912 160 aa11.5□□□□□ -0.57
SHTN1-204ENST00000392903 H7C1H1 209 aa11.5□□□□□ -0.57
SHTN1-204ENST00000392903 CLEC3BP05452 202 aa11.5□□□□□ -0.57
SHTN1-204ENST00000392903 XGP55808 180 aa11.5□□□□□ -0.57
SHTN1-204ENST00000392903 BRD3OSQ6XYD6 125 aa11.5□□□□□ -0.57
SHTN1-204ENST00000392903 IL17RELQ6ZVW7 336 aa11.5□□□□□ -0.57
SHTN1-204ENST00000392903 ERG28Q9UKR5 140 aa11.5□□□□□ -0.57
SHTN1-204ENST00000392903 VCX2Q9H322 139 aa11.49□□□□□ -0.57
SHTN1-204ENST00000392903 A6NJY4 79 aa11.49□□□□□ -0.57
SHTN1-204ENST00000392903 LINC00527Q9UJ94 153 aa11.49□□□□□ -0.57
SHTN1-204ENST00000392903 PPDPFLQ8WWR9 84 aa11.48□□□□□ -0.57
SHTN1-204ENST00000392903 IGHV3OR16-13A0A075B7E8 117 aa11.48□□□□□ -0.57
SHTN1-204ENST00000392903 IGHV3-74A0A0B4J1X5 117 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms