RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 SCGB2A2Q13296 93 aa15.08■□□□□ 0
PTPN11-202ENST00000392597 PRELID3AQ96N28 172 aa15.08■□□□□ 0
PTPN11-202ENST00000392597 PRO1933Q9H354 126 aa15.08■□□□□ 0
PTPN11-202ENST00000392597 IGHV4-4A0A075B6R2 117 aa15.07■□□□□ 0
PTPN11-202ENST00000392597 LINC01619G3V211 115 aa15.07■□□□□ 0
PTPN11-202ENST00000392597 CACNG7P62955 275 aa15.07■□□□□ 0
PTPN11-202ENST00000392597 Q8N976 141 aa15.07■□□□□ 0
PTPN11-202ENST00000392597 ODF3Q96PU9 254 aa15.07■□□□□ 0
PTPN11-202ENST00000392597 PPBPP02775 128 aa15.06■□□□□ 0
PTPN11-202ENST00000392597 TCTEX1D4Q5JR98 221 aa15.06■□□□□ 0
PTPN11-202ENST00000392597 WFDC3Q8IUB2 231 aa15.06■□□□□ 0
PTPN11-202ENST00000392597 IGHV1-24A0A0C4DH33 117 aa15.06■□□□□ 0
PTPN11-202ENST00000392597 DDTP30046 118 aa15.06■□□□□ 0
PTPN11-202ENST00000392597 MSRB1Q9NZV6 116 aa15.06■□□□□ 0
PTPN11-202ENST00000392597 SELENOKQ9Y6D0 94 aa15.06■□□□□ 0
PTPN11-202ENST00000392597 FN1P02751 2386 aaKnown RBP15.05■□□□□ -0
PTPN11-202ENST00000392597 KLLNB2CW77 178 aa15.05■□□□□ -0
PTPN11-202ENST00000392597 INAFM1C9JVW0 142 aa15.05■□□□□ -0
PTPN11-202ENST00000392597 Q6ZQT7 251 aa15.05■□□□□ -0
PTPN11-202ENST00000392597 AP5S1Q9NUS5 200 aa15.05■□□□□ -0
PTPN11-202ENST00000392597 KIR2DL5BA0A0G2JN68 375 aa15.04■□□□□ -0
PTPN11-202ENST00000392597 KIR2DL5BA0A0G2JPC4 375 aa15.04■□□□□ -0
PTPN11-202ENST00000392597 MED14OSP0DP75 135 aa15.04■□□□□ -0
PTPN11-202ENST00000392597 CKS2P33552 79 aa15.04■□□□□ -0
PTPN11-202ENST00000392597 KIR2DL5AQ8N109 375 aa15.04■□□□□ -0
PTPN11-202ENST00000392597 RNF185Q96GF1 192 aa15.04■□□□□ -0
PTPN11-202ENST00000392597 ESM1Q9NQ30 184 aa15.04■□□□□ -0
PTPN11-202ENST00000392597 LAMTOR2Q9Y2Q5 125 aa15.04■□□□□ -0
PTPN11-202ENST00000392597 BTF3P20290 206 aaKnown RBP15.03■□□□□ -0
PTPN11-202ENST00000392597 RNASE4P34096 147 aaKnown RBP15.03■□□□□ -0
PTPN11-202ENST00000392597 SLURP1P55000 103 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 C18orf65Q6ZTR6 163 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 FA2HQ7L5A8 372 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 SMIM15Q7Z3B0 74 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 OR10AG1Q8NH19 301 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 PRSS3P2Q8NHM4 247 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 DPF1Q92782 380 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 PEMTQ9UBM1 199 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 TEP1Q99973 2627 aaKnown RBP15.03■□□□□ -0
PTPN11-202ENST00000392597 CUBNO60494 3623 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 J3KRW8 73 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 CSN3P07498 182 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 ZNF688P0C7X2 276 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 DEFB136Q30KP8 78 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 PSMG4Q5JS54 123 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 EBLN2Q6P2I7 272 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 OR11H1Q8NG94 326 aa15.03■□□□□ -0
PTPN11-202ENST00000392597 A0A0J9YX75 114 aa15.02■□□□□ -0
PTPN11-202ENST00000392597 TFPI2P48307 235 aa15.02■□□□□ -0
PTPN11-202ENST00000392597 ADAMTSL5Q6ZMM2 481 aa15.02■□□□□ -0
PTPN11-202ENST00000392597 OR1N2Q8NGR9 330 aa15.02■□□□□ -0
PTPN11-202ENST00000392597 ASIPP42127 132 aa15.01□□□□□ -0.01
PTPN11-202ENST00000392597 VAMP8Q9BV40 100 aa15.01□□□□□ -0.01
PTPN11-202ENST00000392597 TRAV2A0A0B4J234 112 aa15.01□□□□□ -0.01
PTPN11-202ENST00000392597 H3BVH4 76 aa15.01□□□□□ -0.01
PTPN11-202ENST00000392597 LEPROTL1O95214 131 aa15.01□□□□□ -0.01
PTPN11-202ENST00000392597 RNASE1P07998 156 aaKnown RBP15.01□□□□□ -0.01
PTPN11-202ENST00000392597 LEPP41159 167 aa15.01□□□□□ -0.01
PTPN11-202ENST00000392597 PMCHL1Q16048 86 aa15.01□□□□□ -0.01
PTPN11-202ENST00000392597 SPANXN1Q5VSR9 72 aa15.01□□□□□ -0.01
PTPN11-202ENST00000392597 OR9G4Q8NGQ1 327 aa15.01□□□□□ -0.01
PTPN11-202ENST00000392597 SIGLEC8Q9NYZ4 499 aa15.01□□□□□ -0.01
PTPN11-202ENST00000392597 ANXA2RQ3ZCQ2 193 aa15□□□□□ -0.01
PTPN11-202ENST00000392597 KHDC1LQ5JSQ8 128 aa15□□□□□ -0.01
PTPN11-202ENST00000392597 KLHL30-AS1Q8NEE0 82 aa15□□□□□ -0.01
PTPN11-202ENST00000392597 C20orf144Q9BQM9 153 aa15□□□□□ -0.01
PTPN11-202ENST00000392597 TMEM70Q9BUB7 260 aa15□□□□□ -0.01
PTPN11-202ENST00000392597 CRXO43186 299 aaPredicted RBP14.99□□□□□ -0.01
PTPN11-202ENST00000392597 IFI27P40305 119 aaPredicted RBP14.99□□□□□ -0.01
PTPN11-202ENST00000392597 DEFA6Q01524 100 aa14.99□□□□□ -0.01
PTPN11-202ENST00000392597 SCRT2Q9NQ03 307 aa14.99□□□□□ -0.01
PTPN11-202ENST00000392597 HSPB8Q9UJY1 196 aa14.99□□□□□ -0.01
PTPN11-202ENST00000392597 TCF21O43680 179 aa14.99□□□□□ -0.01
PTPN11-202ENST00000392597 CRLF1O75462 422 aa14.99□□□□□ -0.01
PTPN11-202ENST00000392597 DUSP14O95147 198 aaKnown RBP14.99□□□□□ -0.01
PTPN11-202ENST00000392597 NPYP01303 97 aa14.98□□□□□ -0.01
PTPN11-202ENST00000392597 S100A4P26447 101 aaKnown RBP14.98□□□□□ -0.01
PTPN11-202ENST00000392597 KIR3DS1Q14943 382 aa14.98□□□□□ -0.01
PTPN11-202ENST00000392597 FOXI2Q6ZQN5 318 aa14.98□□□□□ -0.01
PTPN11-202ENST00000392597 C16orf95Q9H693 158 aa14.98□□□□□ -0.01
PTPN11-202ENST00000392597 SMKR1H3BMG3 65 aa14.97□□□□□ -0.01
PTPN11-202ENST00000392597 EVI2AP22794 236 aa14.97□□□□□ -0.01
PTPN11-202ENST00000392597 TDRG1Q3Y452 100 aa14.97□□□□□ -0.01
PTPN11-202ENST00000392597 C7orf71A4D174 169 aa14.97□□□□□ -0.01
PTPN11-202ENST00000392597 NCR2O95944 276 aa14.97□□□□□ -0.01
PTPN11-202ENST00000392597 TSPOP30536 169 aa14.97□□□□□ -0.01
PTPN11-202ENST00000392597 CTAG1AP78358 180 aa14.97□□□□□ -0.01
PTPN11-202ENST00000392597 MAP1LC3AQ9H492 121 aa14.97□□□□□ -0.01
PTPN11-202ENST00000392597 LOC389332A0A1B0GUA5 103 aa14.96□□□□□ -0.01
PTPN11-202ENST00000392597 NDUFAF3Q9BU61 184 aa14.96□□□□□ -0.01
PTPN11-202ENST00000392597 ZNF418Q8TF45 676 aaPredicted RBP14.95□□□□□ -0.02
PTPN11-202ENST00000392597 DLX4Q92988 240 aaPredicted RBP14.95□□□□□ -0.02
PTPN11-202ENST00000392597 PAM16Q9Y3D7 125 aa14.95□□□□□ -0.02
PTPN11-202ENST00000392597 PHLDA3Q9Y5J5 127 aa14.95□□□□□ -0.02
PTPN11-202ENST00000392597 LINC01546A6NGU7 62 aa14.95□□□□□ -0.02
PTPN11-202ENST00000392597 SYS1-DBNDD2H3BUS1 97 aa14.95□□□□□ -0.02
PTPN11-202ENST00000392597 TNFRSF6BO95407 300 aa14.95□□□□□ -0.02
PTPN11-202ENST00000392597 FAM159AQ6UWV7 190 aa14.95□□□□□ -0.02
PTPN11-202ENST00000392597 MAP1LC3CQ9BXW4 147 aa14.95□□□□□ -0.02
PTPN11-202ENST00000392597 NF1P21359 2839 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms