RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 Q71RC1 249 aaPredicted RBP11.83□□□□□ -0.51
CCDC50-201ENST00000392455 UBE2E1P51965 193 aa11.83□□□□□ -0.52
CCDC50-201ENST00000392455 C9orf47Q6ZRZ4 202 aa11.83□□□□□ -0.52
CCDC50-201ENST00000392455 SIGLEC8Q9NYZ4 499 aa11.83□□□□□ -0.52
CCDC50-201ENST00000392455 ZNRF2Q8NHG8 242 aa11.83□□□□□ -0.52
CCDC50-201ENST00000392455 DKK1O94907 266 aa11.83□□□□□ -0.52
CCDC50-201ENST00000392455 BRD3OSQ6XYD6 125 aa11.83□□□□□ -0.52
CCDC50-201ENST00000392455 WFDC1Q9HC57 220 aa11.83□□□□□ -0.52
CCDC50-201ENST00000392455 TMEM14BQ9NUH8 114 aa11.83□□□□□ -0.52
CCDC50-201ENST00000392455 USP17L23D6RBM5 183 aa11.83□□□□□ -0.52
CCDC50-201ENST00000392455 ATP5EP2Q5VTU8 51 aa11.83□□□□□ -0.52
CCDC50-201ENST00000392455 DEFB105AQ8NG35 78 aa11.83□□□□□ -0.52
CCDC50-201ENST00000392455 IGKV2D-24A0A075B6R9 120 aa11.83□□□□□ -0.52
CCDC50-201ENST00000392455 RPL18AQ02543 176 aaKnown RBP11.82□□□□□ -0.52
CCDC50-201ENST00000392455 TEN1Q86WV5 123 aa11.82□□□□□ -0.52
CCDC50-201ENST00000392455 SMKR1H3BMG3 65 aa11.82□□□□□ -0.52
CCDC50-201ENST00000392455 TRBV12-3P01733 135 aa11.82□□□□□ -0.52
CCDC50-201ENST00000392455 NXPH4O95158 308 aa11.82□□□□□ -0.52
CCDC50-201ENST00000392455 CCL18P55774 89 aa11.82□□□□□ -0.52
CCDC50-201ENST00000392455 MRPL51Q4U2R6 128 aaKnown RBP11.82□□□□□ -0.52
CCDC50-201ENST00000392455 FAM208BQ5VWN6 2430 aa11.82□□□□□ -0.52
CCDC50-201ENST00000392455 FOXI2Q6ZQN5 318 aa11.82□□□□□ -0.52
CCDC50-201ENST00000392455 DYNAPQ8N1N2 210 aa11.82□□□□□ -0.52
CCDC50-201ENST00000392455 IGKV4-1P06312 121 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 SPTSSBQ8NFR3 76 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 FAM236AA0A1B0GUQ0 79 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 FAM236BA0A1B0GV22 79 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 CD59P13987 128 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 C12orf74Q32Q52 190 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 IL17DQ8TAD2 202 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 FLVCR1-AS1Q8TAF5 88 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 GGNQ86UU5 652 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 PAQR4Q8N4S7 273 aaPredicted RBP11.81□□□□□ -0.52
CCDC50-201ENST00000392455 BTCP35070 178 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 SAA4P35542 130 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 C10orf55Q5SWW7 151 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 A0A0G2JNJ9 132 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 Q9UFV3 132 aa11.81□□□□□ -0.52
CCDC50-201ENST00000392455 MYO18BQ8IUG5 2567 aa11.8□□□□□ -0.52
CCDC50-201ENST00000392455 COX7A2LO14548 114 aa11.8□□□□□ -0.52
CCDC50-201ENST00000392455 PRR31Q5SQ13 230 aa11.8□□□□□ -0.52
CCDC50-201ENST00000392455 MRPL23Q16540 153 aaKnown RBP11.8□□□□□ -0.52
CCDC50-201ENST00000392455 C8orf86Q6ZUL3 223 aa11.8□□□□□ -0.52
CCDC50-201ENST00000392455 POLR3KQ9Y2Y1 108 aaPredicted RBP11.8□□□□□ -0.52
CCDC50-201ENST00000392455 ATP6V0E2Q8NHE4 81 aa11.8□□□□□ -0.52
CCDC50-201ENST00000392455 IGKV1D-8A0A087WSZ0 117 aa11.8□□□□□ -0.52
CCDC50-201ENST00000392455 SPINK13Q1W4C9 94 aa11.8□□□□□ -0.52
CCDC50-201ENST00000392455 IGF2BP2-AS1Q96M15 143 aa11.8□□□□□ -0.52
CCDC50-201ENST00000392455 B9D2Q9BPU9 175 aa11.8□□□□□ -0.52
CCDC50-201ENST00000392455 NLRC5Q86WI3 1866 aa11.79□□□□□ -0.52
CCDC50-201ENST00000392455 ADAMTS9Q9P2N4 1935 aa11.79□□□□□ -0.52
CCDC50-201ENST00000392455 TRAV3A0A0B4J244 114 aa11.79□□□□□ -0.52
CCDC50-201ENST00000392455 TEX22C9J3V5 150 aa11.79□□□□□ -0.52
CCDC50-201ENST00000392455 XCL2Q9UBD3 114 aa11.79□□□□□ -0.52
CCDC50-201ENST00000392455 ICOSQ9Y6W8 199 aa11.79□□□□□ -0.52
CCDC50-201ENST00000392455 NDUFC2-KCTD14E9PQ53 114 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 COX7B2Q8TF08 81 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 MRPL35Q9NZE8 188 aaKnown RBP11.78□□□□□ -0.52
CCDC50-201ENST00000392455 HOXB4P17483 251 aaPredicted RBP11.78□□□□□ -0.52
CCDC50-201ENST00000392455 NTF4P34130 210 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 CD177Q8N6Q3 437 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 SS18L2Q9UHA2 77 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 TRBV19A0A075B6N1 114 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 H3BT86 120 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 SIP14410 1827 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 CUL9Q8IWT3 2517 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 C10orf105Q8TEF2 133 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 CAMK2N2Q96S95 79 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 J3QRE1 110 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 RS1O15537 224 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 MSMBP08118 114 aa11.78□□□□□ -0.52
CCDC50-201ENST00000392455 Q9H8V8 135 aa11.77□□□□□ -0.52
CCDC50-201ENST00000392455 C15orf62A8K5M9 175 aa11.77□□□□□ -0.52
CCDC50-201ENST00000392455 NTN5Q8WTR8 489 aaPredicted RBP11.77□□□□□ -0.52
CCDC50-201ENST00000392455 PRR25Q96S07 402 aa11.77□□□□□ -0.52
CCDC50-201ENST00000392455 A4D1N5 150 aa11.77□□□□□ -0.53
CCDC50-201ENST00000392455 C16orf74Q96GX8 76 aa11.77□□□□□ -0.53
CCDC50-201ENST00000392455 UPK3BQ9BT76 320 aa11.77□□□□□ -0.53
CCDC50-201ENST00000392455 U3KQE9 123 aa11.77□□□□□ -0.53
CCDC50-201ENST00000392455 PLXNA4Q9HCM2 1894 aa11.77□□□□□ -0.53
CCDC50-201ENST00000392455 OVOL3O00110 214 aa11.77□□□□□ -0.53
CCDC50-201ENST00000392455 LYPD3O95274 346 aa11.77□□□□□ -0.53
CCDC50-201ENST00000392455 CRYGSP22914 178 aa11.77□□□□□ -0.53
CCDC50-201ENST00000392455 IGKV1-27A0A075B6S5 117 aa11.76□□□□□ -0.53
CCDC50-201ENST00000392455 IGKV1-12A0A0C4DH73 117 aa11.76□□□□□ -0.53
CCDC50-201ENST00000392455 NDUFA1O15239 70 aa11.76□□□□□ -0.53
CCDC50-201ENST00000392455 IGKV1D-12P01611 117 aa11.76□□□□□ -0.53
CCDC50-201ENST00000392455 XCL1P47992 114 aa11.76□□□□□ -0.53
CCDC50-201ENST00000392455 SND1-IT1Q9HBX3 110 aa11.76□□□□□ -0.53
CCDC50-201ENST00000392455 ATG2AQ2TAZ0 1938 aa11.76□□□□□ -0.53
CCDC50-201ENST00000392455 GFI1Q99684 422 aa11.76□□□□□ -0.53
CCDC50-201ENST00000392455 WIPF2Q8TF74 440 aaPredicted RBP11.75□□□□□ -0.53
CCDC50-201ENST00000392455 C11orf52Q96A22 123 aa11.75□□□□□ -0.53
CCDC50-201ENST00000392455 A0A1B0GUS0 222 aa11.75□□□□□ -0.53
CCDC50-201ENST00000392455 H0Y9J4 135 aa11.75□□□□□ -0.53
CCDC50-201ENST00000392455 ELANEP08246 267 aa11.75□□□□□ -0.53
CCDC50-201ENST00000392455 SERP1Q9Y6X1 66 aa11.75□□□□□ -0.53
CCDC50-201ENST00000392455 KIF26AQ9ULI4 1882 aaPredicted RBP11.75□□□□□ -0.53
CCDC50-201ENST00000392455 IGFL4Q6B9Z1 124 aa11.75□□□□□ -0.53
CCDC50-201ENST00000392455 DIRC1Q969H9 104 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms