RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 PRB4P10163 310 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-203ENST00000392334 RABAC1Q9UI14 185 aa15.22■□□□□ 0.03
CSNK1D-203ENST00000392334 SMAD5-AS1Q9Y6J3 95 aa15.22■□□□□ 0.03
CSNK1D-203ENST00000392334 SIVA1O15304 175 aa15.22■□□□□ 0.03
CSNK1D-203ENST00000392334 IGHG4P01861 327 aa15.22■□□□□ 0.03
CSNK1D-203ENST00000392334 TRGV3P03979 118 aa15.22■□□□□ 0.03
CSNK1D-203ENST00000392334 CTSGP08311 255 aa15.22■□□□□ 0.03
CSNK1D-203ENST00000392334 AMMECR1LQ6DCA0 310 aa15.22■□□□□ 0.03
CSNK1D-203ENST00000392334 CLEC19AQ6UXS0 136 aa15.22■□□□□ 0.03
CSNK1D-203ENST00000392334 NSD1Q96L73 2696 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-203ENST00000392334 OR9G4Q8NGQ1 327 aa15.21■□□□□ 0.03
CSNK1D-203ENST00000392334 ZNF502Q8TBZ5 544 aa15.21■□□□□ 0.03
CSNK1D-203ENST00000392334 KLK15Q9H2R5 256 aa15.21■□□□□ 0.03
CSNK1D-203ENST00000392334 NPYP01303 97 aa15.21■□□□□ 0.02
CSNK1D-203ENST00000392334 PPIFP30405 207 aaKnown RBP15.21■□□□□ 0.02
CSNK1D-203ENST00000392334 CKS2P33552 79 aa15.21■□□□□ 0.02
CSNK1D-203ENST00000392334 ZNF80P51504 273 aaPredicted RBP15.21■□□□□ 0.02
CSNK1D-203ENST00000392334 CRIP2P52943 208 aaPredicted RBP15.21■□□□□ 0.02
CSNK1D-203ENST00000392334 FOXE3Q13461 319 aa15.21■□□□□ 0.02
CSNK1D-203ENST00000392334 ERASQ7Z444 233 aa15.21■□□□□ 0.02
CSNK1D-203ENST00000392334 ZNF575Q86XF7 245 aa15.21■□□□□ 0.02
CSNK1D-203ENST00000392334 CCDC140Q96MF4 163 aa15.21■□□□□ 0.02
CSNK1D-203ENST00000392334 PPBPP02775 128 aa15.2■□□□□ 0.02
CSNK1D-203ENST00000392334 CACNG7P62955 275 aa15.2■□□□□ 0.02
CSNK1D-203ENST00000392334 KLK9Q2XQG4 91 aa15.2■□□□□ 0.02
CSNK1D-203ENST00000392334 IFI27L1Q96BM0 104 aa15.2■□□□□ 0.02
CSNK1D-203ENST00000392334 KLK9Q9UKQ9 250 aa15.2■□□□□ 0.02
CSNK1D-203ENST00000392334 PF4V1P10720 104 aa15.19■□□□□ 0.02
CSNK1D-203ENST00000392334 ATP5G2Q06055 141 aa15.19■□□□□ 0.02
CSNK1D-203ENST00000392334 TWIST1Q15672 202 aa15.19■□□□□ 0.02
CSNK1D-203ENST00000392334 C10orf99Q6UWK7 81 aa15.19■□□□□ 0.02
CSNK1D-203ENST00000392334 VGLL1Q99990 258 aa15.19■□□□□ 0.02
CSNK1D-203ENST00000392334 TRAV8-6A0A0B4J262 113 aa15.19■□□□□ 0.02
CSNK1D-203ENST00000392334 C7orf71A4D174 169 aa15.19■□□□□ 0.02
CSNK1D-203ENST00000392334 PSMG4Q5JS54 123 aa15.19■□□□□ 0.02
CSNK1D-203ENST00000392334 TEX29Q8N6K0 151 aa15.19■□□□□ 0.02
CSNK1D-203ENST00000392334 CST9LQ9H4G1 147 aa15.19■□□□□ 0.02
CSNK1D-203ENST00000392334 EEF1AKMT3Q96AZ1 226 aa15.18■□□□□ 0.02
CSNK1D-203ENST00000392334 RNF185Q96GF1 192 aa15.18■□□□□ 0.02
CSNK1D-203ENST00000392334 H3BRM9 83 aa15.17■□□□□ 0.02
CSNK1D-203ENST00000392334 IGHV3-11P01762 117 aa15.17■□□□□ 0.02
CSNK1D-203ENST00000392334 HSD52Q0P140 79 aa15.17■□□□□ 0.02
CSNK1D-203ENST00000392334 Q8TAT8 98 aa15.17■□□□□ 0.02
CSNK1D-203ENST00000392334 RBAKDNA6NC62 111 aa15.17■□□□□ 0.02
CSNK1D-203ENST00000392334 RAB9AP51151 201 aa15.17■□□□□ 0.02
CSNK1D-203ENST00000392334 OR4X2Q8NGF9 303 aa15.17■□□□□ 0.02
CSNK1D-203ENST00000392334 A6NDN8 102 aa15.16■□□□□ 0.02
CSNK1D-203ENST00000392334 FABP5P3A8MUU1 101 aa15.16■□□□□ 0.02
CSNK1D-203ENST00000392334 INAFM1C9JVW0 142 aa15.16■□□□□ 0.02
CSNK1D-203ENST00000392334 SNAI2O43623 268 aa15.16■□□□□ 0.02
CSNK1D-203ENST00000392334 LINC01559Q495D7 138 aa15.16■□□□□ 0.02
CSNK1D-203ENST00000392334 MAP1LC3AQ9H492 121 aa15.16■□□□□ 0.02
CSNK1D-203ENST00000392334 TMEM160Q9NX00 188 aa15.16■□□□□ 0.02
CSNK1D-203ENST00000392334 FN1P02751 2386 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-203ENST00000392334 SMKR1H3BMG3 65 aa15.16■□□□□ 0.02
CSNK1D-203ENST00000392334 C21orf62-AS1Q17RA5 79 aa15.16■□□□□ 0.02
CSNK1D-203ENST00000392334 OCIAD2Q56VL3 154 aa15.15■□□□□ 0.02
CSNK1D-203ENST00000392334 TRBV7-1A0A0A6YYK4 115 aa15.14■□□□□ 0.01
CSNK1D-203ENST00000392334 TRBV12-3P01733 135 aa15.14■□□□□ 0.01
CSNK1D-203ENST00000392334 SRD5A1P18405 259 aa15.14■□□□□ 0.01
CSNK1D-203ENST00000392334 HLA-DMBP28068 263 aa15.14■□□□□ 0.01
CSNK1D-203ENST00000392334 ADAMTSL5Q6ZMM2 481 aa15.14■□□□□ 0.01
CSNK1D-203ENST00000392334 MAST4O15021 2626 aa15.14■□□□□ 0.01
CSNK1D-203ENST00000392334 C9orf118A6NHY6 69 aa15.14■□□□□ 0.01
CSNK1D-203ENST00000392334 FAM223BA6NKX1 122 aa15.14■□□□□ 0.01
CSNK1D-203ENST00000392334 FAM223AQ8IWN6 122 aa15.14■□□□□ 0.01
CSNK1D-203ENST00000392334 ZNF702PQ9H963 129 aa15.14■□□□□ 0.01
CSNK1D-203ENST00000392334 NXT2Q9NPJ8 142 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-203ENST00000392334 IGLV1-40P01703 118 aa15.13■□□□□ 0.01
CSNK1D-203ENST00000392334 CFHR3Q02985 330 aa15.13■□□□□ 0.01
CSNK1D-203ENST00000392334 ZMAT4Q9H898 229 aa15.13■□□□□ 0.01
CSNK1D-203ENST00000392334 ZFAND3Q9H8U3 227 aa15.13■□□□□ 0.01
CSNK1D-203ENST00000392334 NIPBLQ6KC79 2804 aaeCLIP15.13■□□□□ 0.01
CSNK1D-203ENST00000392334 ORM1P02763 201 aa15.12■□□□□ 0.01
CSNK1D-203ENST00000392334 FCER1GP30273 86 aa15.12■□□□□ 0.01
CSNK1D-203ENST00000392334 FXYD7P58549 80 aa15.12■□□□□ 0.01
CSNK1D-203ENST00000392334 UFSP1Q6NVU6 142 aa15.12■□□□□ 0.01
CSNK1D-203ENST00000392334 SLC50A1Q9BRV3 221 aa15.12■□□□□ 0.01
CSNK1D-203ENST00000392334 ESM1Q9NQ30 184 aa15.12■□□□□ 0.01
CSNK1D-203ENST00000392334 TEP1Q99973 2627 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-203ENST00000392334 GAGE12BA1L429 117 aa15.12■□□□□ 0.01
CSNK1D-203ENST00000392334 IGFL4Q6B9Z1 124 aa15.12■□□□□ 0.01
CSNK1D-203ENST00000392334 ZNF207O43670 478 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-203ENST00000392334 BUB3O43684 328 aa15.11■□□□□ 0.01
CSNK1D-203ENST00000392334 MSRB1Q9NZV6 116 aa15.11■□□□□ 0.01
CSNK1D-203ENST00000392334 TNFRSF6BO95407 300 aa15.1■□□□□ 0.01
CSNK1D-203ENST00000392334 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.1■□□□□ 0.01
CSNK1D-203ENST00000392334 GTF2H5Q6ZYL4 71 aa15.1■□□□□ 0.01
CSNK1D-203ENST00000392334 IGHV3OR16-13A0A075B7E8 117 aa15.1■□□□□ 0.01
CSNK1D-203ENST00000392334 IGHV3-74A0A0B4J1X5 117 aa15.1■□□□□ 0.01
CSNK1D-203ENST00000392334 IGHV3-66A0A0C4DH42 116 aa15.1■□□□□ 0.01
CSNK1D-203ENST00000392334 GAGE10A6NGK3 116 aa15.1■□□□□ 0.01
CSNK1D-203ENST00000392334 DNAJC9-AS1A6NH13 148 aa15.1■□□□□ 0.01
CSNK1D-203ENST00000392334 ARL3P36405 182 aa15.1■□□□□ 0.01
CSNK1D-203ENST00000392334 DKK2Q9UBU2 259 aa15.1■□□□□ 0.01
CSNK1D-203ENST00000392334 IGHV3-49A0A0A0MS15 119 aa15.09■□□□□ 0.01
CSNK1D-203ENST00000392334 ERCC8Q13216 396 aa15.09■□□□□ 0.01
CSNK1D-203ENST00000392334 MRPL53Q96EL3 112 aaKnown RBP15.09■□□□□ 0.01
CSNK1D-203ENST00000392334 PRSS47A8MTI9 375 aa15.09■□□□□ 0.01
CSNK1D-203ENST00000392334 PRAC2D3DTV9 90 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms