RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 CCL24O00175 119 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 ZNF688P0C7X2 276 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 Q0VG73 95 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 KIAA1644Q3SXP7 199 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 PSMG4Q5JS54 123 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 PRR9Q5T870 116 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 LYZL1Q6UWQ5 148 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 FER1L6-AS1Q8NA97 138 aa8.58□□□□□ -1.04
SMARCAL1-203ENST00000392128 IGKV3D-20A0A0C4DH25 116 aa8.57□□□□□ -1.04
SMARCAL1-203ENST00000392128 A0A1W2PRX2 142 aa8.57□□□□□ -1.04
SMARCAL1-203ENST00000392128 NPSP0C0P6 89 aa8.57□□□□□ -1.04
SMARCAL1-203ENST00000392128 SSBP4Q9BWG4 385 aaPredicted RBP8.57□□□□□ -1.04
SMARCAL1-203ENST00000392128 S100A2P29034 98 aa8.56□□□□□ -1.04
SMARCAL1-203ENST00000392128 PDZD11Q5EBL8 140 aa8.56□□□□□ -1.04
SMARCAL1-203ENST00000392128 OR10J3Q5JRS4 329 aa8.56□□□□□ -1.04
SMARCAL1-203ENST00000392128 ODF3Q96PU9 254 aa8.56□□□□□ -1.04
SMARCAL1-203ENST00000392128 TPPP3Q9BW30 176 aa8.56□□□□□ -1.04
SMARCAL1-203ENST00000392128 C11orf21Q9P2W6 132 aa8.56□□□□□ -1.04
SMARCAL1-203ENST00000392128 A0A0J9YX75 114 aa8.56□□□□□ -1.04
SMARCAL1-203ENST00000392128 SRIP30626 198 aa8.56□□□□□ -1.04
SMARCAL1-203ENST00000392128 CNFNQ9BYD5 112 aa8.56□□□□□ -1.04
SMARCAL1-203ENST00000392128 TP53TG3Q9ULZ0 132 aa8.56□□□□□ -1.04
SMARCAL1-203ENST00000392128 TRAV21A0A0B4J279 112 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 PPBPP02775 128 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 GPX1P07203 203 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 ZNF493Q6ZR52 646 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 DYNLRB2Q8TF09 96 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 HIST1H2BLQ99880 126 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 A0A1B0GUS0 222 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 KLLNB2CW77 178 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 F2Z2F3 143 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 CRLF1O75462 422 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 DEFB114Q30KQ6 69 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 TMEM61Q8N0U2 210 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 TMEM256Q8N2U0 113 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 SIGLEC8Q9NYZ4 499 aa8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 NSD1Q96L73 2696 aaPredicted RBP8.55□□□□□ -1.04
SMARCAL1-203ENST00000392128 ESDP10768 282 aa8.54□□□□□ -1.04
SMARCAL1-203ENST00000392128 FABP4P15090 132 aa8.54□□□□□ -1.04
SMARCAL1-203ENST00000392128 EBLN2Q6P2I7 272 aa8.54□□□□□ -1.04
SMARCAL1-203ENST00000392128 FOXI2Q6ZQN5 318 aa8.54□□□□□ -1.04
SMARCAL1-203ENST00000392128 ALKBH7Q9BT30 221 aaPredicted RBP8.54□□□□□ -1.04
SMARCAL1-203ENST00000392128 HIVEP1P15822 2718 aa8.54□□□□□ -1.04
SMARCAL1-203ENST00000392128 LOC102724200A0A096LPH7 203 aaPredicted RBP8.54□□□□□ -1.04
SMARCAL1-203ENST00000392128 ADARB2-AS1A8MUL3 147 aa8.54□□□□□ -1.04
SMARCAL1-203ENST00000392128 DUSP14O95147 198 aaKnown RBP8.54□□□□□ -1.04
SMARCAL1-203ENST00000392128 Q6ZQT7 251 aa8.54□□□□□ -1.04
SMARCAL1-203ENST00000392128 BAGE3Q86Y29 109 aa8.54□□□□□ -1.04
SMARCAL1-203ENST00000392128 TRAV25A0A0B4J276 109 aa8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 AMBPP02760 352 aa8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 RNASE4P34096 147 aaKnown RBP8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 LEPP41159 167 aa8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 LINC00310P59036 64 aa8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 DMRTA1Q5VZB9 504 aa8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 MRPL52Q86TS9 123 aaKnown RBP8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 EREGO14944 169 aa8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 SERF1AO75920 110 aa8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 CD33P20138 364 aa8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 C18orf32Q8TCD1 76 aa8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 PACRGQ96M98 296 aaPredicted RBP8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 SETD2Q9BYW2 2564 aaPredicted RBP8.53□□□□□ -1.04
SMARCAL1-203ENST00000392128 NUPR1O60356 82 aa8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 OR5AL1P0C617 328 aa8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 KIR3DS1Q14943 382 aa8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 CD300EQ496F6 205 aaPredicted RBP8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 OR10D4PQ8NGN7 298 aa8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 RNASE8Q8TDE3 154 aaKnown RBP8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 TMEM18Q96B42 140 aa8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 SPAG8Q99932 426 aaPredicted RBP8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 FN1P02751 2386 aaKnown RBP8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 K7EP13 123 aa8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 SNAI2O43623 268 aa8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 NTF3P20783 257 aa8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 TWIST1Q15672 202 aa8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 PRR31Q5SQ13 230 aa8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 CDPF1Q6NVV7 123 aa8.52□□□□□ -1.05
SMARCAL1-203ENST00000392128 SETXQ7Z333 2677 aaKnown RBP8.51□□□□□ -1.05
SMARCAL1-203ENST00000392128 OR4C46A6NHA9 309 aa8.51□□□□□ -1.05
SMARCAL1-203ENST00000392128 NDUFA11Q86Y39 141 aa8.51□□□□□ -1.05
SMARCAL1-203ENST00000392128 MUC21A0A0G2JKD1 596 aa8.51□□□□□ -1.05
SMARCAL1-203ENST00000392128 MUC21A0A140T8X8 626 aa8.51□□□□□ -1.05
SMARCAL1-203ENST00000392128 A8MTW9 85 aa8.51□□□□□ -1.05
SMARCAL1-203ENST00000392128 TSPOP30536 169 aa8.51□□□□□ -1.05
SMARCAL1-203ENST00000392128 DEFB131AP59861 70 aa8.51□□□□□ -1.05
SMARCAL1-203ENST00000392128 KRTAP10-3P60369 221 aa8.51□□□□□ -1.05
SMARCAL1-203ENST00000392128 MUC21Q5SSG8 566 aa8.51□□□□□ -1.05
SMARCAL1-203ENST00000392128 NAGKQ9UJ70 344 aa8.51□□□□□ -1.05
SMARCAL1-203ENST00000392128 ZNF256Q9Y2P7 627 aaPredicted RBP8.51□□□□□ -1.05
SMARCAL1-203ENST00000392128 IGHV4-4A0A075B6R2 117 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 C7orf71A4D174 169 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 MED14OSP0DP75 135 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 HLA-DRB4P13762 266 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 ANXA2RQ3ZCQ2 193 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 FAM104BQ5XKR9 115 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 AMTNQ6UX39 209 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 RCHY1Q96PM5 261 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 TMEM191AQ9H0A3 160 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 HLA-DRB4X5D2U9 266 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 AGRNO00468 2067 aa8.5□□□□□ -1.05
SMARCAL1-203ENST00000392128 M0R143 59 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms