RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 IGHV4-59P01825 116 aa12.22□□□□□ -0.45
ALK-201ENST00000389048 ZNF524Q96C55 264 aa12.22□□□□□ -0.45
ALK-201ENST00000389048 ETDCA0A1B0GVM5 59 aa12.22□□□□□ -0.45
ALK-201ENST00000389048 POLEQ07864 2286 aa12.22□□□□□ -0.45
ALK-201ENST00000389048 ZNF493Q6ZR52 646 aa12.21□□□□□ -0.45
ALK-201ENST00000389048 MUSTN1Q8IVN3 82 aa12.21□□□□□ -0.45
ALK-201ENST00000389048 RITA1Q96K30 269 aa12.21□□□□□ -0.45
ALK-201ENST00000389048 MYLKQ15746 1914 aa12.21□□□□□ -0.45
ALK-201ENST00000389048 HOXB4P17483 251 aaPredicted RBP12.21□□□□□ -0.45
ALK-201ENST00000389048 C8orf31Q8N9H6 132 aa12.21□□□□□ -0.45
ALK-201ENST00000389048 ZMAT4Q9H898 229 aa12.21□□□□□ -0.45
ALK-201ENST00000389048 ZFP2Q6ZN57 461 aa12.21□□□□□ -0.45
ALK-201ENST00000389048 TIRAPP58753 221 aa12.21□□□□□ -0.46
ALK-201ENST00000389048 RMI2Q96E14 147 aa12.21□□□□□ -0.46
ALK-201ENST00000389048 LTAP01374 205 aa12.21□□□□□ -0.46
ALK-201ENST00000389048 TDRG1Q3Y452 100 aa12.2□□□□□ -0.46
ALK-201ENST00000389048 RNASE8Q8TDE3 154 aaKnown RBP12.2□□□□□ -0.46
ALK-201ENST00000389048 A0A1B0GX51 115 aa12.2□□□□□ -0.46
ALK-201ENST00000389048 BRK1Q8WUW1 75 aa12.2□□□□□ -0.46
ALK-201ENST00000389048 FAM236AA0A1B0GUQ0 79 aa12.2□□□□□ -0.46
ALK-201ENST00000389048 FAM236BA0A1B0GV22 79 aa12.2□□□□□ -0.46
ALK-201ENST00000389048 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
ALK-201ENST00000389048 PRSS47A8MTI9 375 aa12.2□□□□□ -0.46
ALK-201ENST00000389048 IGLC1P0CG04 106 aa12.2□□□□□ -0.46
ALK-201ENST00000389048 GYPEP15421 78 aa12.2□□□□□ -0.46
ALK-201ENST00000389048 C15orf65H3BRN8 121 aa12.19□□□□□ -0.46
ALK-201ENST00000389048 DEFB112Q30KQ8 113 aa12.19□□□□□ -0.46
ALK-201ENST00000389048 TRPM7Q96QT4 1865 aa12.19□□□□□ -0.46
ALK-201ENST00000389048 FOXL2NBQ6ZUU3 175 aa12.19□□□□□ -0.46
ALK-201ENST00000389048 CAMK2N2Q96S95 79 aa12.19□□□□□ -0.46
ALK-201ENST00000389048 GRNP28799 593 aaKnown RBP12.19□□□□□ -0.46
ALK-201ENST00000389048 TMEM190Q8WZ59 177 aa12.19□□□□□ -0.46
ALK-201ENST00000389048 ZNF503Q96F45 646 aa12.19□□□□□ -0.46
ALK-201ENST00000389048 BRWD3Q6RI45 1802 aa12.19□□□□□ -0.46
ALK-201ENST00000389048 TTTY13Q9BZ97 58 aa12.19□□□□□ -0.46
ALK-201ENST00000389048 CEP290O15078 2479 aa12.19□□□□□ -0.46
ALK-201ENST00000389048 HIST2H2BCQ6DN03 193 aa12.19□□□□□ -0.46
ALK-201ENST00000389048 TMEM14CQ9P0S9 112 aa12.18□□□□□ -0.46
ALK-201ENST00000389048 RHOHQ15669 191 aa12.18□□□□□ -0.46
ALK-201ENST00000389048 MSRB1Q9NZV6 116 aa12.18□□□□□ -0.46
ALK-201ENST00000389048 SEM1Q6ZVN7 128 aa12.18□□□□□ -0.46
ALK-201ENST00000389048 CLEC2BQ92478 149 aa12.18□□□□□ -0.46
ALK-201ENST00000389048 IGHV4OR15-8A0A075B7B6 117 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 A0A087WW49 117 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 E9PQ18 207 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 ZNF491Q8N8L2 437 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 C9orf47Q6ZRZ4 202 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 AGPAT4-IT1Q9H0P7 198 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 ICOSQ9Y6W8 199 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 FAM186AA6NE01 2351 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 NUPR1O60356 82 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 RPL39P62891 51 aaKnown RBP12.17□□□□□ -0.46
ALK-201ENST00000389048 CCL24O00175 119 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 C17orf82Q86X59 251 aaPredicted RBP12.17□□□□□ -0.46
ALK-201ENST00000389048 NDUFC2O95298 119 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 DEFB1P60022 68 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 WFDC2Q14508 124 aa12.17□□□□□ -0.46
ALK-201ENST00000389048 ACYP1P07311 99 aa12.16□□□□□ -0.46
ALK-201ENST00000389048 ZNF747Q9BV97 191 aa12.16□□□□□ -0.46
ALK-201ENST00000389048 FAM231DQ6ZW35 169 aa12.16□□□□□ -0.46
ALK-201ENST00000389048 SIPA1L1O43166 1804 aa12.16□□□□□ -0.46
ALK-201ENST00000389048 LMO1P25800 156 aa12.16□□□□□ -0.46
ALK-201ENST00000389048 Q8TCH9 128 aa12.15□□□□□ -0.46
ALK-201ENST00000389048 PYGO2Q9BRQ0 406 aa12.15□□□□□ -0.46
ALK-201ENST00000389048 SND1-IT1Q9HBX3 110 aa12.15□□□□□ -0.46
ALK-201ENST00000389048 PROK2Q9HC23 129 aa12.15□□□□□ -0.46
ALK-201ENST00000389048 C20orf78Q9BR46 151 aa12.15□□□□□ -0.46
ALK-201ENST00000389048 ADAMTS7Q9UKP4 1686 aa12.15□□□□□ -0.46
ALK-201ENST00000389048 F8W735 103 aaPredicted RBP12.15□□□□□ -0.46
ALK-201ENST00000389048 PROP1O75360 226 aa12.15□□□□□ -0.46
ALK-201ENST00000389048 NRGNQ92686 78 aa12.15□□□□□ -0.46
ALK-201ENST00000389048 VSIG2Q96IQ7 327 aa12.15□□□□□ -0.46
ALK-201ENST00000389048 IGLL5B9A064 214 aa12.15□□□□□ -0.47
ALK-201ENST00000389048 PSMB8P28062 276 aa12.15□□□□□ -0.47
ALK-201ENST00000389048 C10orf91Q5T1B1 145 aa12.15□□□□□ -0.47
ALK-201ENST00000389048 INTS1Q8N201 2190 aaKnown RBP12.14□□□□□ -0.47
ALK-201ENST00000389048 FUSP35637 526 aaKnown RBP eCLIP12.14□□□□□ -0.47
ALK-201ENST00000389048 GATA3P23771 443 aa12.14□□□□□ -0.47
ALK-201ENST00000389048 FOXI2Q6ZQN5 318 aa12.14□□□□□ -0.47
ALK-201ENST00000389048 PIFOQ8TCI5 191 aa12.14□□□□□ -0.47
ALK-201ENST00000389048 TMEM61Q8N0U2 210 aa12.14□□□□□ -0.47
ALK-201ENST00000389048 A0A0J9YXV3 536 aa12.14□□□□□ -0.47
ALK-201ENST00000389048 K7ENP7 123 aa12.13□□□□□ -0.47
ALK-201ENST00000389048 IGHV4-38-2P0DP08 117 aa12.13□□□□□ -0.47
ALK-201ENST00000389048 A4D1N5 150 aa12.13□□□□□ -0.47
ALK-201ENST00000389048 K7EQD1 137 aa12.13□□□□□ -0.47
ALK-201ENST00000389048 UBE2AP49459 152 aa12.13□□□□□ -0.47
ALK-201ENST00000389048 K7EM74 188 aa12.13□□□□□ -0.47
ALK-201ENST00000389048 GREB1LQ9C091 1923 aaPredicted RBP12.12□□□□□ -0.47
ALK-201ENST00000389048 HEATR5AQ86XA9 2040 aa12.12□□□□□ -0.47
ALK-201ENST00000389048 PRSS33Q8NF86 280 aa12.12□□□□□ -0.47
ALK-201ENST00000389048 SPTSSBQ8NFR3 76 aa12.12□□□□□ -0.47
ALK-201ENST00000389048 C1orf147Q96MC9 270 aaPredicted RBP12.12□□□□□ -0.47
ALK-201ENST00000389048 CRIPAKQ8N1N5 446 aa12.12□□□□□ -0.47
ALK-201ENST00000389048 ANKRD39Q53RE8 183 aa12.12□□□□□ -0.47
ALK-201ENST00000389048 CADP27708 2225 aa12.12□□□□□ -0.47
ALK-201ENST00000389048 DOCK7Q96N67 2140 aa12.12□□□□□ -0.47
ALK-201ENST00000389048 CFPP27918 469 aa12.12□□□□□ -0.47
ALK-201ENST00000389048 SIVA1O15304 175 aa12.11□□□□□ -0.47
ALK-201ENST00000389048 NREPQ16612 68 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms