RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 CLEC2BQ92478 149 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 GUCA1BQ9UMX6 200 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 PRELID3BQ9Y3B1 194 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 SPCS1Q9Y6A9 102 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 KIAA1107Q9UPP5 1409 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 GOLGA3Q08378 1498 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 IQSEC2Q5JU85 1478 aa-0.75□□□□□ -2.53
SNORD28-201ENST00000384706 TRBV10-1A0A0K0K1A3 114 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 TCRBV3S1A0A5B6 114 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 TMEM189A5PLL7 270 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 RBAKDNA6NC62 111 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 HSBP1L1C9JCN9 74 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 G3V318 75 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 APOC4-APOC2K7ER74 178 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 IFNA14P01570 189 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 TRGC2P03986 189 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 TFF1P04155 84 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 IFNA16P05015 189 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 RPL35P42766 123 aaKnown RBP-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 HBBP68871 147 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 MRPS36P82909 103 aaKnown RBP-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 ITGB3BPQ13352 177 aaPredicted RBP-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 INSL4Q14641 139 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 TAF1AQ15573 450 aaPredicted RBP-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 CCSMST1Q4G0I0 132 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 CCDC122Q5T0U0 273 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 FKBP1CQ5VVH2 108 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 TRAPPC5Q8IUR0 188 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 OR2J1Q9GZK6 312 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 FXYD6Q9H0Q3 95 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 PARVBQ9HBI1 364 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 BATF3Q9NR55 127 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 C19orf12Q9NSK7 152 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 RTL9Q8NET4 1388 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 CAMSAP2Q08AD1 1489 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 AKAP11Q9UKA4 1901 aa-0.76□□□□□ -2.53
SNORD28-201ENST00000384706 SPTBN4Q9H254 2564 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 TANC2Q9HCD6 1990 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 PLXNA2O75051 1894 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 PLXNB2O15031 1838 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 KIDINS220Q9ULH0 1771 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 LRP5O75197 1615 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 BICRAQ9NZM4 1560 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 CD109Q6YHK3 1445 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 TRGV1A0A0A0MS02 117 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 TRBV10-3A0A0K0K1G6 114 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 LOC107984640A0A0U1RRK4 108 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 TMEM210A6NLX4 147 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 MFSD11O43934 449 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 OR2H2O95918 312 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 IFNA5P01569 189 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 POLR2JP52435 117 aaKnown RBP-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 GTF2A1P52655 376 aaPredicted RBP-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 HIST1H3AP68431 136 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 DCDP81605 110 aaKnown RBP-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 SLC48A1Q6P1K1 146 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 C4orf33Q8N1A6 199 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 NEK7Q8TDX7 302 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 MCEEQ96PE7 176 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 GPX7Q96SL4 187 aaPredicted RBP-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 SMIM7Q9BQ49 75 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 OR2H1Q9GZK4 316 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 MPC1Q9Y5U8 109 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 STARD9Q9P2P6 4700 aa-0.77□□□□□ -2.53
SNORD28-201ENST00000384706 SONP18583 2426 aaKnown RBP-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 CCDC144AA2RUR9 1427 aa-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 UBR4Q5T4S7 5183 aa-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 IFITM5A6NNB3 132 aa-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 KPNA4O00629 521 aaPredicted RBP-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 DEGS1O15121 323 aa-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 NPFFO15130 113 aa-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 SAA1P0DJI8 122 aaPredicted RBP-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 TPT1P13693 172 aaKnown RBP-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 CYP2G1PQ6ZSU1 146 aa-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 DIRC1Q969H9 104 aa-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 PBDC1Q9BVG4 233 aa-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 TAF9BQ9HBM6 251 aa-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 FKBP11Q9NYL4 201 aa-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 SCP2D1Q9UJQ7 156 aa-0.78□□□□□ -2.53
SNORD28-201ENST00000384706 DLC1Q96QB1 1528 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 ARAP1Q96P48 1450 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 RYR3Q15413 4870 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 UHRF1BP1Q6BDS2 1440 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 MAP3K5Q99683 1374 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 NBPF19A0A087WUL8 3843 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 LOC107986453A0A1B0GWG9 222 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 BCE1O60756 84 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 IFNA21P01568 189 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 IFNA6P05013 189 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 CCL3L1P16619 93 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 ADCYAP1P18509 176 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 OGNP20774 298 aaKnown RBP-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 SPRR1BP22528 89 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 MAXP61244 160 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 NCALDP61601 193 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 SSBP1Q04837 148 aaKnown RBP-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 TMEM97Q5BJF2 176 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 PHF5AQ7RTV0 110 aaKnown RBP-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 OR4S1Q8NGB4 309 aa-0.79□□□□□ -2.54
SNORD28-201ENST00000384706 OR5H6Q8NGV6 325 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms