RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 XIRP1Q702N8 1843 aaKnown RBP4.67□□□□□ -1.66
RFX3-204ENST00000382004 PRSS47A8MTI9 375 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 LYPD3O95274 346 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 CNOT1A5YKK6 2376 aaKnown RBP4.67□□□□□ -1.66
RFX3-204ENST00000382004 ZNF493Q6ZR52 646 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 NPBQ8NG41 125 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 ZFP36L1Q07352 338 aaKnown RBP4.66□□□□□ -1.66
RFX3-204ENST00000382004 SH2D6Q7Z4S9 175 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.66□□□□□ -1.66
RFX3-204ENST00000382004 SPRY2O43597 315 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 HIGD2BQ4VC39 106 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 GVINP1Q7Z2Y8 2422 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 TNRC6AQ8NDV7 1962 aaKnown RBP4.66□□□□□ -1.66
RFX3-204ENST00000382004 IGLC7A0M8Q6 106 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 ATOX1O00244 68 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 ANKRD39Q53RE8 183 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 SMIM27A0A1W2PRY6 76 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 GYPEP15421 78 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 CCL18P55774 89 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 HERV-K104P63124 156 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 MPLKIPQ8TAP9 179 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 TMEM14BQ9NUH8 114 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 TNRC6BQ9UPQ9 1833 aaKnown RBP4.66□□□□□ -1.66
RFX3-204ENST00000382004 COX7A2LO14548 114 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 FANCD2OSQ96PS1 177 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 SND1-IT1Q9HBX3 110 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 ESM1Q9NQ30 184 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 CD59P13987 128 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 VOPP1Q96AW1 172 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 NCOR1P1Q9H4R4 102 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 ADCYAP1P18509 176 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 OPRPNQ99935 248 aaPredicted RBP4.66□□□□□ -1.66
RFX3-204ENST00000382004 ANK1P16157 1881 aa4.66□□□□□ -1.66
RFX3-204ENST00000382004 J3KT08 172 aa4.65□□□□□ -1.66
RFX3-204ENST00000382004 K7ERS5 55 aa4.65□□□□□ -1.66
RFX3-204ENST00000382004 PNRC2Q9NPJ4 139 aaKnown RBP4.65□□□□□ -1.66
RFX3-204ENST00000382004 ARID2Q68CP9 1835 aa4.65□□□□□ -1.66
RFX3-204ENST00000382004 NDUFA4L2Q9NRX3 87 aa4.65□□□□□ -1.66
RFX3-204ENST00000382004 IGHV2-70DA0A0C4DH43 119 aa4.65□□□□□ -1.66
RFX3-204ENST00000382004 IGHV7-4-1A0A0J9YVY3 117 aa4.65□□□□□ -1.66
RFX3-204ENST00000382004 H3BRN7 92 aa4.65□□□□□ -1.66
RFX3-204ENST00000382004 K7EMI3 77 aa4.65□□□□□ -1.66
RFX3-204ENST00000382004 TMEM61Q8N0U2 210 aa4.65□□□□□ -1.66
RFX3-204ENST00000382004 TRBV6-6A0A0A6YYG2 114 aa4.65□□□□□ -1.67
RFX3-204ENST00000382004 F8W735 103 aaPredicted RBP4.65□□□□□ -1.67
RFX3-204ENST00000382004 ARHGAP21Q5T5U3 1957 aa4.65□□□□□ -1.67
RFX3-204ENST00000382004 V9GYV3 84 aa4.65□□□□□ -1.67
RFX3-204ENST00000382004 SRSF2Q01130 221 aaKnown RBP4.65□□□□□ -1.67
RFX3-204ENST00000382004 APRG1Q8IVJ8 170 aa4.65□□□□□ -1.67
RFX3-204ENST00000382004 C20orf78Q9BR46 151 aa4.65□□□□□ -1.67
RFX3-204ENST00000382004 ICOSQ9Y6W8 199 aa4.65□□□□□ -1.67
RFX3-204ENST00000382004 PCNX1Q96RV3 2341 aa4.65□□□□□ -1.67
RFX3-204ENST00000382004 TAF1LQ8IZX4 1826 aa4.65□□□□□ -1.67
RFX3-204ENST00000382004 PCP2Q8IVA1 136 aa4.65□□□□□ -1.67
RFX3-204ENST00000382004 PYGO2Q9BRQ0 406 aa4.65□□□□□ -1.67
RFX3-204ENST00000382004 CCL24O00175 119 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 DEFB136Q30KP8 78 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 FAM120AOSQ5T036 256 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 ACACAQ13085 2346 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 IGLV3-19P01714 112 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 DAND5Q8N907 189 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 PLXND1Q9Y4D7 1925 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 LTAP01374 205 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 PRR30Q53SZ7 412 aaPredicted RBP4.64□□□□□ -1.67
RFX3-204ENST00000382004 TPSG1Q9NRR2 321 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 C9JQL5 133 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 TSC2P49815 1807 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 WNK3Q9BYP7 1800 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 PIFOQ8TCI5 191 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 Q6ZVH6 145 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 MRPL55Q7Z7F7 128 aaKnown RBP4.64□□□□□ -1.67
RFX3-204ENST00000382004 DEFB125Q8N687 156 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 TRPM3Q9HCF6 1732 aaPredicted RBP4.64□□□□□ -1.67
RFX3-204ENST00000382004 SIVA1O15304 175 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 RBAKDNA6NC62 111 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 IGHV4-59P01825 116 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 FAM110AQ9BQ89 295 aa4.64□□□□□ -1.67
RFX3-204ENST00000382004 TCF20Q9UGU0 1960 aaKnown RBP4.63□□□□□ -1.67
RFX3-204ENST00000382004 VWCEQ96DN2 955 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 RPL39LQ96EH5 51 aaKnown RBP4.63□□□□□ -1.67
RFX3-204ENST00000382004 A0A0U1RQV1 116 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 MST1P26927 711 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 FOXI2Q6ZQN5 318 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 ZNF833PQ6ZTB9 187 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 C17orf77Q96MU5 243 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 WDR81Q562E7 1941 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 LRCOL1A6NCL2 159 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 TRBV12-3P01733 135 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 LYL1P12980 280 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 ATP6V0E2Q8NHE4 81 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 DUX4L9Q6RFH8 374 aaPredicted RBP4.63□□□□□ -1.67
RFX3-204ENST00000382004 FLVCR1-AS1Q8TAF5 88 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 HELZP42694 1942 aaKnown RBP4.63□□□□□ -1.67
RFX3-204ENST00000382004 H0YGX0 51 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 CRYGBP07316 175 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 MLST8Q9BVC4 326 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 GATA1P15976 413 aaPredicted RBP4.63□□□□□ -1.67
RFX3-204ENST00000382004 C3orf22Q8N5N4 141 aa4.63□□□□□ -1.67
RFX3-204ENST00000382004 K7EQD1 137 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 TAX1BP3O14907 124 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms