RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 FHL3Q13643 280 aa12.91□□□□□ -0.34
RPAIN-203ENST00000381209 MRPL51Q4U2R6 128 aaKnown RBP12.91□□□□□ -0.34
RPAIN-203ENST00000381209 FOXI2Q6ZQN5 318 aa12.91□□□□□ -0.34
RPAIN-203ENST00000381209 NAGKQ9UJ70 344 aa12.91□□□□□ -0.34
RPAIN-203ENST00000381209 CD28P10747 220 aa12.9□□□□□ -0.34
RPAIN-203ENST00000381209 FAM19A2Q8N3H0 131 aa12.9□□□□□ -0.34
RPAIN-203ENST00000381209 DUX3Q96PT4 197 aa12.9□□□□□ -0.34
RPAIN-203ENST00000381209 SMR3AQ99954 134 aa12.9□□□□□ -0.34
RPAIN-203ENST00000381209 MSRB1Q9NZV6 116 aa12.9□□□□□ -0.34
RPAIN-203ENST00000381209 TSSC4Q9Y5U2 329 aaPredicted RBP12.9□□□□□ -0.34
RPAIN-203ENST00000381209 MXRA5Q9NR99 2828 aa12.9□□□□□ -0.34
RPAIN-203ENST00000381209 D6R8Y8 96 aa12.89□□□□□ -0.35
RPAIN-203ENST00000381209 M0R2Z0 102 aa12.89□□□□□ -0.35
RPAIN-203ENST00000381209 PPBPP02775 128 aa12.89□□□□□ -0.35
RPAIN-203ENST00000381209 ASIPP42127 132 aa12.89□□□□□ -0.35
RPAIN-203ENST00000381209 ANXA2RQ3ZCQ2 193 aa12.89□□□□□ -0.35
RPAIN-203ENST00000381209 RNF185Q96GF1 192 aa12.89□□□□□ -0.35
RPAIN-203ENST00000381209 RAX2Q96IS3 184 aa12.89□□□□□ -0.35
RPAIN-203ENST00000381209 PRELID3AQ96N28 172 aa12.89□□□□□ -0.35
RPAIN-203ENST00000381209 ZNF469Q96JG9 3925 aaPredicted RBP12.89□□□□□ -0.35
RPAIN-203ENST00000381209 RAB4AP20338 218 aa12.88□□□□□ -0.35
RPAIN-203ENST00000381209 TSPOP30536 169 aa12.88□□□□□ -0.35
RPAIN-203ENST00000381209 SMIM15Q7Z3B0 74 aa12.88□□□□□ -0.35
RPAIN-203ENST00000381209 OR10AG1Q8NH19 301 aa12.88□□□□□ -0.35
RPAIN-203ENST00000381209 DYNLRB2Q8TF09 96 aa12.88□□□□□ -0.35
RPAIN-203ENST00000381209 FLNAP21333 2647 aaKnown RBP12.88□□□□□ -0.35
RPAIN-203ENST00000381209 CD33P20138 364 aa12.88□□□□□ -0.35
RPAIN-203ENST00000381209 CKS2P33552 79 aa12.88□□□□□ -0.35
RPAIN-203ENST00000381209 KIR3DS1Q14943 382 aa12.88□□□□□ -0.35
RPAIN-203ENST00000381209 DEFB114Q30KQ6 69 aa12.88□□□□□ -0.35
RPAIN-203ENST00000381209 SPANXN1Q5VSR9 72 aa12.88□□□□□ -0.35
RPAIN-203ENST00000381209 LAMTOR2Q9Y2Q5 125 aa12.88□□□□□ -0.35
RPAIN-203ENST00000381209 C7orf71A4D174 169 aa12.87□□□□□ -0.35
RPAIN-203ENST00000381209 H3BVH4 76 aa12.87□□□□□ -0.35
RPAIN-203ENST00000381209 CCL24O00175 119 aa12.87□□□□□ -0.35
RPAIN-203ENST00000381209 S100A4P26447 101 aaKnown RBP12.87□□□□□ -0.35
RPAIN-203ENST00000381209 SCRT2Q9NQ03 307 aa12.87□□□□□ -0.35
RPAIN-203ENST00000381209 TRAV25A0A0B4J276 109 aa12.86□□□□□ -0.35
RPAIN-203ENST00000381209 KRTDAPP60985 99 aa12.86□□□□□ -0.35
RPAIN-203ENST00000381209 PKIAP61925 76 aa12.86□□□□□ -0.35
RPAIN-203ENST00000381209 TMEM61Q8N0U2 210 aa12.86□□□□□ -0.35
RPAIN-203ENST00000381209 PRSS3P2Q8NHM4 247 aa12.86□□□□□ -0.35
RPAIN-203ENST00000381209 CITED2Q99967 270 aaPredicted RBP12.86□□□□□ -0.35
RPAIN-203ENST00000381209 SIGLEC8Q9NYZ4 499 aa12.86□□□□□ -0.35
RPAIN-203ENST00000381209 RNF114Q9Y508 228 aa12.86□□□□□ -0.35
RPAIN-203ENST00000381209 IGHV1-24A0A0C4DH33 117 aa12.85□□□□□ -0.35
RPAIN-203ENST00000381209 A8MTW9 85 aa12.85□□□□□ -0.35
RPAIN-203ENST00000381209 CDKN1BP46527 198 aa12.85□□□□□ -0.35
RPAIN-203ENST00000381209 FAM159AQ6UWV7 190 aa12.85□□□□□ -0.35
RPAIN-203ENST00000381209 FA2HQ7L5A8 372 aa12.85□□□□□ -0.35
RPAIN-203ENST00000381209 C11orf44Q8N8P7 122 aa12.85□□□□□ -0.35
RPAIN-203ENST00000381209 C3orf79P0CE67 100 aa12.84□□□□□ -0.35
RPAIN-203ENST00000381209 TDRG1Q3Y452 100 aa12.84□□□□□ -0.35
RPAIN-203ENST00000381209 AP5S1Q9NUS5 200 aa12.84□□□□□ -0.35
RPAIN-203ENST00000381209 A0A1W2PRX2 142 aa12.83□□□□□ -0.35
RPAIN-203ENST00000381209 TSTD3H0UI37 97 aa12.83□□□□□ -0.35
RPAIN-203ENST00000381209 GNRH2O43555 120 aa12.83□□□□□ -0.35
RPAIN-203ENST00000381209 DEFB131AP59861 70 aa12.83□□□□□ -0.35
RPAIN-203ENST00000381209 HIST2H2BDQ6DRA6 164 aa12.83□□□□□ -0.35
RPAIN-203ENST00000381209 AMTNQ6UX39 209 aa12.83□□□□□ -0.35
RPAIN-203ENST00000381209 TEX43Q6ZNM6 134 aa12.83□□□□□ -0.35
RPAIN-203ENST00000381209 Q8N976 141 aa12.83□□□□□ -0.35
RPAIN-203ENST00000381209 SPAG8Q99932 426 aaPredicted RBP12.83□□□□□ -0.35
RPAIN-203ENST00000381209 PHLDA3Q9Y5J5 127 aa12.83□□□□□ -0.35
RPAIN-203ENST00000381209 ANK3Q12955 4377 aaKnown RBP12.83□□□□□ -0.36
RPAIN-203ENST00000381209 TLN2Q9Y4G6 2542 aa12.83□□□□□ -0.36
RPAIN-203ENST00000381209 TRAV12-3A0A0B4J271 114 aa12.83□□□□□ -0.36
RPAIN-203ENST00000381209 OR4C46A6NHA9 309 aa12.83□□□□□ -0.36
RPAIN-203ENST00000381209 TCF21O43680 179 aa12.83□□□□□ -0.36
RPAIN-203ENST00000381209 NPYP01303 97 aa12.83□□□□□ -0.36
RPAIN-203ENST00000381209 RNASE3P12724 160 aaKnown RBP12.83□□□□□ -0.36
RPAIN-203ENST00000381209 HLA-DRB4P13762 266 aa12.83□□□□□ -0.36
RPAIN-203ENST00000381209 FOSL1P15407 271 aa12.83□□□□□ -0.36
RPAIN-203ENST00000381209 EVI2AP22794 236 aa12.83□□□□□ -0.36
RPAIN-203ENST00000381209 PROK1P58294 105 aa12.83□□□□□ -0.36
RPAIN-203ENST00000381209 ZNF664Q8N3J9 261 aa12.83□□□□□ -0.36
RPAIN-203ENST00000381209 HLA-DRB4X5D2U9 266 aa12.83□□□□□ -0.36
RPAIN-203ENST00000381209 SONP18583 2426 aaKnown RBP12.82□□□□□ -0.36
RPAIN-203ENST00000381209 SMKR1H3BMG3 65 aa12.82□□□□□ -0.36
RPAIN-203ENST00000381209 NXPH4O95158 308 aa12.82□□□□□ -0.36
RPAIN-203ENST00000381209 IGKV3-20P01619 116 aa12.82□□□□□ -0.36
RPAIN-203ENST00000381209 IFI27P40305 119 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-203ENST00000381209 CD300EQ496F6 205 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-203ENST00000381209 TIMM8BQ9Y5J9 83 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-203ENST00000381209 ITPR2Q14571 2701 aa12.82□□□□□ -0.36
RPAIN-203ENST00000381209 AKAP9Q99996 3911 aa12.81□□□□□ -0.36
RPAIN-203ENST00000381209 LEPROTL1O95214 131 aa12.81□□□□□ -0.36
RPAIN-203ENST00000381209 NCR2O95944 276 aa12.81□□□□□ -0.36
RPAIN-203ENST00000381209 BTF3P20290 206 aaKnown RBP12.81□□□□□ -0.36
RPAIN-203ENST00000381209 MAP1LC3AQ9H492 121 aa12.81□□□□□ -0.36
RPAIN-203ENST00000381209 LOC389332A0A1B0GUA5 103 aa12.8□□□□□ -0.36
RPAIN-203ENST00000381209 LINC00587B1AMM8 73 aa12.8□□□□□ -0.36
RPAIN-203ENST00000381209 H3BMM0 161 aa12.8□□□□□ -0.36
RPAIN-203ENST00000381209 PMCHL1Q16048 86 aa12.8□□□□□ -0.36
RPAIN-203ENST00000381209 MRAP2Q96G30 205 aa12.8□□□□□ -0.36
RPAIN-203ENST00000381209 MAP6D1Q9H9H5 199 aa12.8□□□□□ -0.36
RPAIN-203ENST00000381209 HSPB8Q9UJY1 196 aa12.8□□□□□ -0.36
RPAIN-203ENST00000381209 FASNP49327 2511 aaKnown RBP12.8□□□□□ -0.36
RPAIN-203ENST00000381209 KNCNA6PVL3 124 aa12.79□□□□□ -0.36
RPAIN-203ENST00000381209 M0R381 172 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms