RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 GAGE4Q13068 117 aa8.66□□□□□ -1.02
NPC1L1-202ENST00000381160 RAX2Q96IS3 184 aa8.66□□□□□ -1.02
NPC1L1-202ENST00000381160 ZMAT4Q9H898 229 aa8.66□□□□□ -1.02
NPC1L1-202ENST00000381160 SMG1Q96Q15 3661 aaKnown RBP8.66□□□□□ -1.02
NPC1L1-202ENST00000381160 LINC01559Q495D7 138 aa8.65□□□□□ -1.02
NPC1L1-202ENST00000381160 SPENQ96T58 3664 aaKnown RBP8.65□□□□□ -1.02
NPC1L1-202ENST00000381160 CRYGBP07316 175 aa8.65□□□□□ -1.02
NPC1L1-202ENST00000381160 KIR2DL4Q99706 377 aa8.65□□□□□ -1.02
NPC1L1-202ENST00000381160 ZNF883P0CG24 379 aa8.65□□□□□ -1.02
NPC1L1-202ENST00000381160 GAGE2BQ13066 116 aa8.65□□□□□ -1.02
NPC1L1-202ENST00000381160 GAGE2EQ4V326 116 aa8.65□□□□□ -1.02
NPC1L1-202ENST00000381160 C14orf178Q8N769 122 aaPredicted RBP8.65□□□□□ -1.02
NPC1L1-202ENST00000381160 DEFB124Q8NES8 71 aa8.65□□□□□ -1.02
NPC1L1-202ENST00000381160 PPDPFLQ8WWR9 84 aa8.65□□□□□ -1.02
NPC1L1-202ENST00000381160 FAM110AQ9BQ89 295 aa8.65□□□□□ -1.02
NPC1L1-202ENST00000381160 GAGE2DQ9UEU5 116 aa8.65□□□□□ -1.02
NPC1L1-202ENST00000381160 KALRNO60229 2985 aa8.65□□□□□ -1.03
NPC1L1-202ENST00000381160 ADGRG4Q8IZF6 3080 aa8.65□□□□□ -1.03
NPC1L1-202ENST00000381160 LGALS1P09382 135 aaKnown RBP8.65□□□□□ -1.03
NPC1L1-202ENST00000381160 NFE4Q86UQ8 179 aa8.65□□□□□ -1.03
NPC1L1-202ENST00000381160 DPM3Q9P2X0 92 aa8.65□□□□□ -1.03
NPC1L1-202ENST00000381160 PHLDA3Q9Y5J5 127 aa8.65□□□□□ -1.03
NPC1L1-202ENST00000381160 F5H697 171 aa8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 CDX4O14627 284 aaPredicted RBP8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 MRPS12O15235 138 aaKnown RBP8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 LY6HO94772 140 aa8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 NUP37Q8NFH4 326 aa8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 MGAQ8IWI9 3026 aa8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 IGLV1-47P01700 117 aa8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 HERVK_113P61574 105 aa8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 Q6ZQT7 251 aa8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 PIFOQ8TCI5 191 aa8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 PLEKHB2Q96CS7 222 aa8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 C2orf66Q6UXQ4 117 aa8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 C8orf31Q8N9H6 132 aa8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 YAE1D1Q9NRH1 226 aa8.64□□□□□ -1.03
NPC1L1-202ENST00000381160 TRBV7-3A0A075B6L6 115 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 IGKV3D-20A0A0C4DH25 116 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 SNCGO76070 127 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 ID1P41134 155 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 MORN3Q6PF18 240 aaPredicted RBP8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 SMIM2Q9BVW6 85 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 CUL9Q8IWT3 2517 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 NDPQ00604 133 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 ORMDL2Q53FV1 153 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 RPL39LQ96EH5 51 aaKnown RBP8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 C16orf92Q96LL3 132 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 C9JAW5 83 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 CFAP126Q5VTH2 177 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 AGPAT4-IT1Q9H0P7 198 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 PRO0461Q9UI25 63 aa8.63□□□□□ -1.03
NPC1L1-202ENST00000381160 LINC01548A6NM66 108 aa8.62□□□□□ -1.03
NPC1L1-202ENST00000381160 CLEC19AQ6UXS0 136 aa8.62□□□□□ -1.03
NPC1L1-202ENST00000381160 CDIP1Q9H305 208 aa8.62□□□□□ -1.03
NPC1L1-202ENST00000381160 CREBBPQ92793 2442 aa8.62□□□□□ -1.03
NPC1L1-202ENST00000381160 SUMO2P61956 95 aaKnown RBP8.62□□□□□ -1.03
NPC1L1-202ENST00000381160 C15orf32Q32M92 178 aa8.62□□□□□ -1.03
NPC1L1-202ENST00000381160 FANCD2OSQ96PS1 177 aa8.62□□□□□ -1.03
NPC1L1-202ENST00000381160 C11orf21Q9P2W6 132 aa8.62□□□□□ -1.03
NPC1L1-202ENST00000381160 IGHV4-39P01824 125 aa8.61□□□□□ -1.03
NPC1L1-202ENST00000381160 TEN1Q86WV5 123 aa8.61□□□□□ -1.03
NPC1L1-202ENST00000381160 SMAD5-AS1Q9Y6J3 95 aa8.61□□□□□ -1.03
NPC1L1-202ENST00000381160 SPTAN1Q13813 2472 aaKnown RBP8.61□□□□□ -1.03
NPC1L1-202ENST00000381160 TCL1BO95988 128 aa8.61□□□□□ -1.03
NPC1L1-202ENST00000381160 ZNF688P0C7X2 276 aa8.61□□□□□ -1.03
NPC1L1-202ENST00000381160 ANKRD29Q8N6D5 301 aa8.61□□□□□ -1.03
NPC1L1-202ENST00000381160 SMCPP49901 116 aaPredicted RBP8.61□□□□□ -1.03
NPC1L1-202ENST00000381160 OR11H6Q8NGC7 330 aa8.61□□□□□ -1.03
NPC1L1-202ENST00000381160 A0A0G2JNJ9 132 aa8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 CTSGP08311 255 aa8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 Q9UFV3 132 aa8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 ANKHD1Q8IWZ3 2542 aaKnown RBP8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 CCDC179H3BU77 68 aa8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 TMEM190Q8WZ59 177 aa8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 COL6A6A6NMZ7 2263 aa8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 IGLV11-55A0A075B6I3 123 aa8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 TRAV2A0A0B4J234 112 aa8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 E7EQL1 145 aa8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 LGALS3P17931 250 aaKnown RBP8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 C3orf56Q8N813 242 aa8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 NRACQ8N912 160 aa8.6□□□□□ -1.03
NPC1L1-202ENST00000381160 ZFHX2Q9C0A1 2572 aaPredicted RBP8.59□□□□□ -1.03
NPC1L1-202ENST00000381160 METTL26Q96S19 204 aa8.59□□□□□ -1.03
NPC1L1-202ENST00000381160 BAALCQ8WXS3 180 aa8.59□□□□□ -1.03
NPC1L1-202ENST00000381160 KAAG1Q9UBP8 84 aa8.59□□□□□ -1.03
NPC1L1-202ENST00000381160 IGLV2-18A0A075B6J9 118 aa8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 TMEM262E9PQX1 116 aa8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 CD3EP07766 207 aa8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 FHL3Q13643 280 aa8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 FAM74A4Q5TZK3 123 aa8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 RNF5Q99942 180 aa8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 SLC50A1Q9BRV3 221 aa8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 DUSP14O95147 198 aaKnown RBP8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 PRSS2P07478 247 aa8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 DEFB1P60022 68 aa8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 SLC25A20O43772 301 aa8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 ATP6V0E2Q8NHE4 81 aa8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 FAM57AQ8TBR7 257 aa8.58□□□□□ -1.04
NPC1L1-202ENST00000381160 VCX2Q9H322 139 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms