RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 REC114Q7Z4M0 266 aa9.03□□□□□ -0.96
USP3-202ENST00000380324 VAMP8Q9BV40 100 aa9.03□□□□□ -0.96
USP3-202ENST00000380324 C2orf70A6NJV1 201 aa9.03□□□□□ -0.96
USP3-202ENST00000380324 CKS2P33552 79 aa9.03□□□□□ -0.96
USP3-202ENST00000380324 LINC00173Q6ZV60 143 aa9.03□□□□□ -0.96
USP3-202ENST00000380324 ATOH7Q8N100 152 aa9.03□□□□□ -0.96
USP3-202ENST00000380324 PRSS3P2Q8NHM4 247 aa9.03□□□□□ -0.96
USP3-202ENST00000380324 TMEM191AQ9H0A3 160 aa9.03□□□□□ -0.96
USP3-202ENST00000380324 YAE1D1Q9NRH1 226 aa9.03□□□□□ -0.96
USP3-202ENST00000380324 AP5S1Q9NUS5 200 aa9.03□□□□□ -0.96
USP3-202ENST00000380324 NOTCH2Q04721 2471 aa9.03□□□□□ -0.96
USP3-202ENST00000380324 TRAV21A0A0B4J279 112 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 IFI27P40305 119 aaPredicted RBP9.02□□□□□ -0.97
USP3-202ENST00000380324 TCTEX1D4Q5JR98 221 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 Q6ZSV7 163 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 FA2HQ7L5A8 372 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 TEX29Q8N6K0 151 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 ESM1Q9NQ30 184 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 KIR2DL5BA0A0G2JN68 375 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 KIR2DL5BA0A0G2JPC4 375 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 LGALS9O00182 355 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 SPRY2O43597 315 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 NPYP01303 97 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 IGKV3-20P01619 116 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 KIR2DL5AQ8N109 375 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 C11orf44Q8N8P7 122 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 OR11H1Q8NG94 326 aa9.02□□□□□ -0.97
USP3-202ENST00000380324 GAS8-AS1O95177 125 aa9.01□□□□□ -0.97
USP3-202ENST00000380324 LEPROTL1O95214 131 aa9.01□□□□□ -0.97
USP3-202ENST00000380324 BTF3P20290 206 aaKnown RBP9.01□□□□□ -0.97
USP3-202ENST00000380324 EVI2AP22794 236 aa9.01□□□□□ -0.97
USP3-202ENST00000380324 SNRPD3P62318 126 aaKnown RBP9.01□□□□□ -0.97
USP3-202ENST00000380324 SPANXN1Q5VSR9 72 aa9.01□□□□□ -0.97
USP3-202ENST00000380324 SAMD13Q5VXD3 122 aa9.01□□□□□ -0.97
USP3-202ENST00000380324 TMEM86BQ8N661 226 aa9.01□□□□□ -0.97
USP3-202ENST00000380324 KLHL30-AS1Q8NEE0 82 aa9.01□□□□□ -0.97
USP3-202ENST00000380324 RNF185Q96GF1 192 aa9.01□□□□□ -0.97
USP3-202ENST00000380324 FAM19A4Q96LR4 140 aa9.01□□□□□ -0.97
USP3-202ENST00000380324 SIGLEC8Q9NYZ4 499 aa9.01□□□□□ -0.97
USP3-202ENST00000380324 U3KQK5 164 aa9.01□□□□□ -0.97
USP3-202ENST00000380324 ANXA2RQ3ZCQ2 193 aa9□□□□□ -0.97
USP3-202ENST00000380324 FOXC2Q99958 501 aa9□□□□□ -0.97
USP3-202ENST00000380324 H0Y8G0 127 aa9□□□□□ -0.97
USP3-202ENST00000380324 RAB4AP20338 218 aa9□□□□□ -0.97
USP3-202ENST00000380324 S100A4P26447 101 aaKnown RBP9□□□□□ -0.97
USP3-202ENST00000380324 SPATA12Q7Z6I5 190 aa9□□□□□ -0.97
USP3-202ENST00000380324 C14orf144Q96I85 54 aa9□□□□□ -0.97
USP3-202ENST00000380324 ANK3Q12955 4377 aaKnown RBP8.99□□□□□ -0.97
USP3-202ENST00000380324 LINC01619G3V211 115 aa8.99□□□□□ -0.97
USP3-202ENST00000380324 K7EQG2 157 aa8.99□□□□□ -0.97
USP3-202ENST00000380324 M0R381 172 aa8.99□□□□□ -0.97
USP3-202ENST00000380324 CD5LO43866 347 aa8.99□□□□□ -0.97
USP3-202ENST00000380324 OR5AL1P0C617 328 aa8.99□□□□□ -0.97
USP3-202ENST00000380324 C4orf3Q8WVX3 66 aa8.99□□□□□ -0.97
USP3-202ENST00000380324 DPF1Q92782 380 aa8.99□□□□□ -0.97
USP3-202ENST00000380324 FXYD7P58549 80 aa8.99□□□□□ -0.97
USP3-202ENST00000380324 ADAMTSL5Q6ZMM2 481 aa8.99□□□□□ -0.97
USP3-202ENST00000380324 TMEM70Q9BUB7 260 aa8.99□□□□□ -0.97
USP3-202ENST00000380324 TRAV26-2A0A0B4J265 109 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 A0A1W2PRX2 142 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 SNAI2O43623 268 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 GATA1P15976 413 aaPredicted RBP8.98□□□□□ -0.97
USP3-202ENST00000380324 ASIPP42127 132 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 MAJINQ3KP22 176 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 DMRTA1Q5VZB9 504 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 TRAV12-2A0A075B6T6 113 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 TRAV12-3A0A0B4J271 114 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 KLLNB2CW77 178 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 SMIM15Q7Z3B0 74 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 APRG1Q8IVJ8 170 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 OR1N2Q8NGR9 330 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 NDUFAF3Q9BU61 184 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 HIVEP2P31629 2446 aa8.98□□□□□ -0.97
USP3-202ENST00000380324 MUC4Q99102 2169 aa8.97□□□□□ -0.97
USP3-202ENST00000380324 A0A0J9YX75 114 aa8.97□□□□□ -0.97
USP3-202ENST00000380324 GNRH2O43555 120 aa8.97□□□□□ -0.97
USP3-202ENST00000380324 CTAG1AP78358 180 aa8.97□□□□□ -0.97
USP3-202ENST00000380324 SPATA45Q537H7 98 aa8.97□□□□□ -0.97
USP3-202ENST00000380324 OR9G4Q8NGQ1 327 aa8.97□□□□□ -0.97
USP3-202ENST00000380324 MCRIP2Q9BUT9 160 aaKnown RBP8.97□□□□□ -0.97
USP3-202ENST00000380324 PHLDA3Q9Y5J5 127 aa8.97□□□□□ -0.97
USP3-202ENST00000380324 TRBV7-9A0A0J9YWB2 115 aa8.97□□□□□ -0.97
USP3-202ENST00000380324 SYS1-DBNDD2H3BUS1 97 aa8.97□□□□□ -0.97
USP3-202ENST00000380324 TCF21O43680 179 aa8.97□□□□□ -0.97
USP3-202ENST00000380324 DLX4Q92988 240 aaPredicted RBP8.97□□□□□ -0.97
USP3-202ENST00000380324 SMR3AQ99954 134 aa8.97□□□□□ -0.97
USP3-202ENST00000380324 TNFRSF6BO95407 300 aa8.96□□□□□ -0.97
USP3-202ENST00000380324 CACNG7P62955 275 aa8.96□□□□□ -0.97
USP3-202ENST00000380324 SPINK13Q1W4C9 94 aa8.96□□□□□ -0.97
USP3-202ENST00000380324 ZNF705AQ6ZN79 300 aaPredicted RBP8.96□□□□□ -0.97
USP3-202ENST00000380324 C20orf144Q9BQM9 153 aa8.96□□□□□ -0.97
USP3-202ENST00000380324 MAP1LC3CQ9BXW4 147 aa8.96□□□□□ -0.97
USP3-202ENST00000380324 MAP1LC3AQ9H492 121 aa8.96□□□□□ -0.97
USP3-202ENST00000380324 HSPB8Q9UJY1 196 aa8.96□□□□□ -0.97
USP3-202ENST00000380324 A0A096LNJ9 63 aa8.96□□□□□ -0.98
USP3-202ENST00000380324 PPBPP02775 128 aa8.96□□□□□ -0.98
USP3-202ENST00000380324 FAM159AQ6UWV7 190 aa8.96□□□□□ -0.98
USP3-202ENST00000380324 SVIPQ8NHG7 77 aa8.96□□□□□ -0.98
USP3-202ENST00000380324 PEMTQ9UBM1 199 aa8.96□□□□□ -0.98
USP3-202ENST00000380324 RNASE3P12724 160 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms