RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 CRLF1O75462 422 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 PRR31Q5SQ13 230 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 NKAPP1Q8N9T2 125 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 PKIGQ9Y2B9 76 aa7.6□□□□□ -1.19
SNX1-202ENST00000380285 CACNA1HO95180 2353 aa7.59□□□□□ -1.19
SNX1-202ENST00000380285 K7ERJ3 54 aa7.59□□□□□ -1.19
SNX1-202ENST00000380285 IGHV1-69P01742 117 aa7.59□□□□□ -1.19
SNX1-202ENST00000380285 RSPO1Q2MKA7 263 aaPredicted RBP7.59□□□□□ -1.19
SNX1-202ENST00000380285 ZNF491Q8N8L2 437 aa7.59□□□□□ -1.19
SNX1-202ENST00000380285 PLXNB1O43157 2135 aa7.59□□□□□ -1.19
SNX1-202ENST00000380285 NCOA6Q14686 2063 aaPredicted RBP7.59□□□□□ -1.19
SNX1-202ENST00000380285 PRSS29PA6NIE9 313 aa7.59□□□□□ -1.19
SNX1-202ENST00000380285 LOXP28300 417 aaPredicted RBP7.59□□□□□ -1.19
SNX1-202ENST00000380285 Q6ZR03 302 aa7.59□□□□□ -1.19
SNX1-202ENST00000380285 IGHV7-4-1A0A0J9YVY3 117 aa7.59□□□□□ -1.19
SNX1-202ENST00000380285 TRBV6-1A0A0K0K1D8 114 aa7.59□□□□□ -1.19
SNX1-202ENST00000380285 IGLL5B9A064 214 aa7.59□□□□□ -1.19
SNX1-202ENST00000380285 SYNJ2BPP57105 145 aa7.59□□□□□ -1.2
SNX1-202ENST00000380285 IGHV3-53P01767 116 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 C5orf47Q569G3 176 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 RMI2Q96E14 147 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 PLCE1Q9P212 2302 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 SPINK13Q1W4C9 94 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 NTN5Q8WTR8 489 aaPredicted RBP7.58□□□□□ -1.2
SNX1-202ENST00000380285 SS18L2Q9UHA2 77 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 HAMPP81172 84 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 MED12LQ86YW9 2145 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 CFHR4Q92496 578 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 MSMBP08118 114 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 KRTAP27-1Q3LI81 207 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 TCTEX1D4Q5JR98 221 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 SLC25A29Q8N8R3 303 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 PROK2Q9HC23 129 aa7.58□□□□□ -1.2
SNX1-202ENST00000380285 NSUN5P1Q3KNT7 163 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 TRAV26-2A0A0B4J265 109 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 RPL35AP18077 110 aaKnown RBP7.57□□□□□ -1.2
SNX1-202ENST00000380285 FREM1Q5H8C1 2179 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 MALRD1Q5VYJ5 2156 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 BAALC-AS2P0C853 105 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 A0A0B4J2C4 111 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 CEACAM8P31997 349 aaPredicted RBP7.57□□□□□ -1.2
SNX1-202ENST00000380285 IGF2BP2-AS1Q96M15 143 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 KIAA1549Q9HCM3 1950 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 TEX48A0A1B0GUV7 120 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 CRYBA4P53673 196 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 FAM120AOSQ5T036 256 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 BRD3OSQ6XYD6 125 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 UBE2E2Q96LR5 201 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 KIAA1671Q9BY89 1806 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 C22orf46C9J442 243 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 MED14OSP0DP75 135 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 MED13Q9UHV7 2174 aa7.57□□□□□ -1.2
SNX1-202ENST00000380285 J3KT08 172 aa7.56□□□□□ -1.2
SNX1-202ENST00000380285 Q71RC1 249 aaPredicted RBP7.56□□□□□ -1.2
SNX1-202ENST00000380285 BPESC1Q9GZL8 116 aa7.56□□□□□ -1.2
SNX1-202ENST00000380285 CACNA1GO43497 2377 aa7.56□□□□□ -1.2
SNX1-202ENST00000380285 ELANEP08246 267 aa7.56□□□□□ -1.2
SNX1-202ENST00000380285 APOC4P55056 127 aa7.56□□□□□ -1.2
SNX1-202ENST00000380285 EGR2P11161 476 aaPredicted RBP7.56□□□□□ -1.2
SNX1-202ENST00000380285 WIPF3A6NGB9 483 aa7.56□□□□□ -1.2
SNX1-202ENST00000380285 PFN2P35080 140 aa7.56□□□□□ -1.2
SNX1-202ENST00000380285 ZNRF2Q8NHG8 242 aa7.56□□□□□ -1.2
SNX1-202ENST00000380285 HCFC1P51610 2035 aa7.56□□□□□ -1.2
SNX1-202ENST00000380285 FOXE3Q13461 319 aa7.56□□□□□ -1.2
SNX1-202ENST00000380285 AMTNQ6UX39 209 aa7.56□□□□□ -1.2
SNX1-202ENST00000380285 PCP2Q8IVA1 136 aa7.56□□□□□ -1.2
SNX1-202ENST00000380285 TNCP24821 2201 aa7.55□□□□□ -1.2
SNX1-202ENST00000380285 H3BT86 120 aa7.55□□□□□ -1.2
SNX1-202ENST00000380285 GP9P14770 177 aa7.55□□□□□ -1.2
SNX1-202ENST00000380285 NOTCH4Q99466 2003 aa7.55□□□□□ -1.2
SNX1-202ENST00000380285 EML5Q05BV3 1969 aa7.55□□□□□ -1.2
SNX1-202ENST00000380285 RBM3P98179 157 aaKnown RBP7.55□□□□□ -1.2
SNX1-202ENST00000380285 DAD1P61803 113 aa7.55□□□□□ -1.2
SNX1-202ENST00000380285 PIFOQ8TCI5 191 aa7.55□□□□□ -1.2
SNX1-202ENST00000380285 B5MCH6 92 aa7.54□□□□□ -1.2
SNX1-202ENST00000380285 G3V4G9 280 aa7.54□□□□□ -1.2
SNX1-202ENST00000380285 CREBBPQ92793 2442 aa7.54□□□□□ -1.2
SNX1-202ENST00000380285 NPBQ8NG41 125 aa7.54□□□□□ -1.2
SNX1-202ENST00000380285 KLK9Q9UKQ9 250 aa7.54□□□□□ -1.2
SNX1-202ENST00000380285 ICOSQ9Y6W8 199 aa7.54□□□□□ -1.2
SNX1-202ENST00000380285 F6UB75 175 aa7.54□□□□□ -1.2
SNX1-202ENST00000380285 LHBP01229 141 aa7.54□□□□□ -1.2
SNX1-202ENST00000380285 DEFB130BP0DP73 79 aa7.54□□□□□ -1.2
SNX1-202ENST00000380285 DEFB130AP0DP74 79 aa7.54□□□□□ -1.2
SNX1-202ENST00000380285 SPATA12Q7Z6I5 190 aa7.54□□□□□ -1.2
SNX1-202ENST00000380285 PRB4P10163 310 aaPredicted RBP7.54□□□□□ -1.2
SNX1-202ENST00000380285 ADAMTS9Q9P2N4 1935 aa7.54□□□□□ -1.2
SNX1-202ENST00000380285 CTRLP40313 264 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 DAZ2Q13117 558 aaKnown RBP7.53□□□□□ -1.2
SNX1-202ENST00000380285 CR1LQ2VPA4 569 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 MRPL55Q7Z7F7 128 aaKnown RBP7.53□□□□□ -1.2
SNX1-202ENST00000380285 DAZ4Q86SG3 579 aaKnown RBP7.53□□□□□ -1.2
SNX1-202ENST00000380285 DYNAPQ8N1N2 210 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 C11orf44Q8N8P7 122 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 DAZ3Q9NR90 486 aaKnown RBP7.53□□□□□ -1.2
SNX1-202ENST00000380285 JMJD7-PLA2G4BH0Y9G9 81 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 CDPF1Q6NVV7 123 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 LYPD6Q86Y78 171 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 RNF138Q8WVD3 245 aa7.53□□□□□ -1.2
SNX1-202ENST00000380285 TIMM17AQ99595 171 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 222.6 ms