RNA–Protein interactions for RNA: ENST00000379803.5

SIN3B-202, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIN3B, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-202ENST00000379803 EDA2RQ9HAV5 297 aa12.18□□□□□ -0.46
SIN3B-202ENST00000379803 U3KQE9 123 aa12.18□□□□□ -0.46
SIN3B-202ENST00000379803 ZNF48Q96MX3 618 aaPredicted RBP12.18□□□□□ -0.46
SIN3B-202ENST00000379803 C8orf49Q96NF6 230 aa12.18□□□□□ -0.46
SIN3B-202ENST00000379803 TP53TG1Q9Y2A0 90 aa12.18□□□□□ -0.46
SIN3B-202ENST00000379803 IGHG2P01859 326 aa12.18□□□□□ -0.46
SIN3B-202ENST00000379803 ZNF114Q8NC26 417 aa12.18□□□□□ -0.46
SIN3B-202ENST00000379803 SPCS1Q9Y6A9 102 aa12.18□□□□□ -0.46
SIN3B-202ENST00000379803 NEGR1Q7Z3B1 354 aa12.17□□□□□ -0.46
SIN3B-202ENST00000379803 Q8N9W7 124 aa12.17□□□□□ -0.46
SIN3B-202ENST00000379803 UBE2BP63146 152 aa12.17□□□□□ -0.46
SIN3B-202ENST00000379803 SHANK1Q9Y566 2161 aa12.17□□□□□ -0.46
SIN3B-202ENST00000379803 RBAKDNA6NC62 111 aa12.17□□□□□ -0.46
SIN3B-202ENST00000379803 HLA-DRB4P13762 266 aa12.17□□□□□ -0.46
SIN3B-202ENST00000379803 LYPD6BQ8NI32 183 aa12.17□□□□□ -0.46
SIN3B-202ENST00000379803 HLA-DRB4X5D2U9 266 aa12.17□□□□□ -0.46
SIN3B-202ENST00000379803 HSD52Q0P140 79 aa12.17□□□□□ -0.46
SIN3B-202ENST00000379803 PMVKQ15126 192 aa12.17□□□□□ -0.46
SIN3B-202ENST00000379803 PTPRSQ13332 1948 aa12.16□□□□□ -0.46
SIN3B-202ENST00000379803 COL4A3Q01955 1670 aa12.16□□□□□ -0.46
SIN3B-202ENST00000379803 A0A096LPF7 62 aa12.16□□□□□ -0.46
SIN3B-202ENST00000379803 IGKV1-39P01597 117 aa12.16□□□□□ -0.46
SIN3B-202ENST00000379803 IGKV1D-39P04432 117 aa12.16□□□□□ -0.46
SIN3B-202ENST00000379803 C2orf66Q6UXQ4 117 aa12.16□□□□□ -0.46
SIN3B-202ENST00000379803 Q6ZWC4 215 aa12.16□□□□□ -0.46
SIN3B-202ENST00000379803 MRPL52Q86TS9 123 aaKnown RBP12.16□□□□□ -0.46
SIN3B-202ENST00000379803 SIRPDQ9H106 197 aa12.16□□□□□ -0.46
SIN3B-202ENST00000379803 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
SIN3B-202ENST00000379803 IGFBPL1Q8WX77 278 aa12.16□□□□□ -0.46
SIN3B-202ENST00000379803 FAM104BQ5XKR9 115 aa12.16□□□□□ -0.46
SIN3B-202ENST00000379803 LINC00479Q96M42 142 aa12.16□□□□□ -0.46
SIN3B-202ENST00000379803 PLA2G2EQ9NZK7 142 aa12.16□□□□□ -0.46
SIN3B-202ENST00000379803 GPHB5Q86YW7 130 aa12.15□□□□□ -0.46
SIN3B-202ENST00000379803 CITED2Q99967 270 aaPredicted RBP12.15□□□□□ -0.46
SIN3B-202ENST00000379803 MED13Q9UHV7 2174 aa12.15□□□□□ -0.46
SIN3B-202ENST00000379803 IGHV4OR15-8A0A075B7B6 117 aa12.15□□□□□ -0.46
SIN3B-202ENST00000379803 A0A087WW49 117 aa12.15□□□□□ -0.46
SIN3B-202ENST00000379803 SMKR1H3BMG3 65 aa12.15□□□□□ -0.46
SIN3B-202ENST00000379803 PRSS29PA6NIE9 313 aa12.15□□□□□ -0.47
SIN3B-202ENST00000379803 H3BMM0 161 aa12.15□□□□□ -0.47
SIN3B-202ENST00000379803 Q8N8P6 123 aa12.15□□□□□ -0.47
SIN3B-202ENST00000379803 WFDC11Q8NEX6 87 aa12.15□□□□□ -0.47
SIN3B-202ENST00000379803 UBE2WQ96B02 151 aa12.15□□□□□ -0.47
SIN3B-202ENST00000379803 KRTAP27-1Q3LI81 207 aa12.14□□□□□ -0.47
SIN3B-202ENST00000379803 APRG1Q8IVJ8 170 aa12.14□□□□□ -0.47
SIN3B-202ENST00000379803 CHAC1Q9BUX1 264 aa12.14□□□□□ -0.47
SIN3B-202ENST00000379803 Q9HAA7 133 aa12.14□□□□□ -0.47
SIN3B-202ENST00000379803 MYO18BQ8IUG5 2567 aa12.14□□□□□ -0.47
SIN3B-202ENST00000379803 C2orf70A6NJV1 201 aa12.14□□□□□ -0.47
SIN3B-202ENST00000379803 ORAOV1Q8WV07 137 aa12.14□□□□□ -0.47
SIN3B-202ENST00000379803 IGLV11-55A0A075B6I3 123 aa12.14□□□□□ -0.47
SIN3B-202ENST00000379803 NPC2P61916 151 aa12.14□□□□□ -0.47
SIN3B-202ENST00000379803 INAFM1C9JVW0 142 aa12.14□□□□□ -0.47
SIN3B-202ENST00000379803 NCOR2Q9Y618 2525 aa12.13□□□□□ -0.47
SIN3B-202ENST00000379803 ANKRD39Q53RE8 183 aa12.13□□□□□ -0.47
SIN3B-202ENST00000379803 IGHV3-38A0A0C4DH36 116 aa12.13□□□□□ -0.47
SIN3B-202ENST00000379803 F8W735 103 aaPredicted RBP12.13□□□□□ -0.47
SIN3B-202ENST00000379803 IGHV4-31P0DP07 118 aa12.13□□□□□ -0.47
SIN3B-202ENST00000379803 HERVK_113P63121 156 aa12.13□□□□□ -0.47
SIN3B-202ENST00000379803 A6NDX4 124 aa12.13□□□□□ -0.47
SIN3B-202ENST00000379803 C19orf84I3L1E1 186 aa12.13□□□□□ -0.47
SIN3B-202ENST00000379803 RPL32P62910 135 aaKnown RBP12.13□□□□□ -0.47
SIN3B-202ENST00000379803 SPRNQ5BIV9 151 aa12.13□□□□□ -0.47
SIN3B-202ENST00000379803 TMEM213A2RRL7 107 aa12.12□□□□□ -0.47
SIN3B-202ENST00000379803 FAM231DQ6ZW35 169 aa12.12□□□□□ -0.47
SIN3B-202ENST00000379803 VWC2LB2RUY7 222 aa12.12□□□□□ -0.47
SIN3B-202ENST00000379803 ZC2HC1BQ5TFG8 222 aa12.12□□□□□ -0.47
SIN3B-202ENST00000379803 IGLV2-23P01705 113 aa12.12□□□□□ -0.47
SIN3B-202ENST00000379803 LMO4P61968 165 aa12.11□□□□□ -0.47
SIN3B-202ENST00000379803 ATP6V0E2Q8NHE4 81 aa12.11□□□□□ -0.47
SIN3B-202ENST00000379803 CRLF1O75462 422 aa12.11□□□□□ -0.47
SIN3B-202ENST00000379803 IGLV1-47P01700 117 aa12.11□□□□□ -0.47
SIN3B-202ENST00000379803 PFN2P35080 140 aa12.11□□□□□ -0.47
SIN3B-202ENST00000379803 UBE2V1Q13404 147 aa12.11□□□□□ -0.47
SIN3B-202ENST00000379803 C20orf78Q9BR46 151 aa12.11□□□□□ -0.47
SIN3B-202ENST00000379803 Q8N7P7 452 aa12.11□□□□□ -0.47
SIN3B-202ENST00000379803 ZNF479Q96JC4 524 aa12.1□□□□□ -0.47
SIN3B-202ENST00000379803 AGPAT4-IT1Q9H0P7 198 aa12.1□□□□□ -0.47
SIN3B-202ENST00000379803 TRAV8-2A0A0B4J237 113 aa12.1□□□□□ -0.47
SIN3B-202ENST00000379803 GYPEP15421 78 aa12.1□□□□□ -0.47
SIN3B-202ENST00000379803 C16orf54Q6UWD8 224 aa12.1□□□□□ -0.47
SIN3B-202ENST00000379803 MTURNQ8N3F0 131 aa12.1□□□□□ -0.47
SIN3B-202ENST00000379803 F6UB75 175 aa12.1□□□□□ -0.47
SIN3B-202ENST00000379803 H3BUT2 72 aa12.1□□□□□ -0.47
SIN3B-202ENST00000379803 PLA2G2AP14555 144 aa12.1□□□□□ -0.47
SIN3B-202ENST00000379803 SFTA2Q6UW10 78 aa12.09□□□□□ -0.47
SIN3B-202ENST00000379803 Q6ZSR3 168 aa12.09□□□□□ -0.47
SIN3B-202ENST00000379803 FNDC4Q9H6D8 234 aaPredicted RBP12.09□□□□□ -0.47
SIN3B-202ENST00000379803 FXYD5Q96DB9 178 aa12.09□□□□□ -0.47
SIN3B-202ENST00000379803 C20orf144Q9BQM9 153 aa12.09□□□□□ -0.47
SIN3B-202ENST00000379803 BCL6BQ8N143 479 aaPredicted RBP12.09□□□□□ -0.47
SIN3B-202ENST00000379803 RNASE8Q8TDE3 154 aaKnown RBP12.09□□□□□ -0.47
SIN3B-202ENST00000379803 NAV2Q8IVL1 2488 aa12.09□□□□□ -0.47
SIN3B-202ENST00000379803 SIGLEC8Q9NYZ4 499 aa12.08□□□□□ -0.48
SIN3B-202ENST00000379803 PRR20EP86478 221 aa12.08□□□□□ -0.48
SIN3B-202ENST00000379803 PRR20CP86479 221 aa12.08□□□□□ -0.48
SIN3B-202ENST00000379803 PRR20DP86480 221 aa12.08□□□□□ -0.48
SIN3B-202ENST00000379803 PRR20BP86481 221 aa12.08□□□□□ -0.48
SIN3B-202ENST00000379803 PRR20AP86496 221 aa12.08□□□□□ -0.48
SIN3B-202ENST00000379803 IL15RAQ13261 267 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms