RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 PTPN13Q12923 2485 aa11.38□□□□□ -0.59
PRNP-201ENST00000379440 RNASEKQ6P5S7 137 aaKnown RBP11.37□□□□□ -0.59
PRNP-201ENST00000379440 SLC25A34Q6PIV7 304 aa11.37□□□□□ -0.59
PRNP-201ENST00000379440 C8orf86Q6ZUL3 223 aa11.37□□□□□ -0.59
PRNP-201ENST00000379440 URB1-AS1Q96HZ7 61 aa11.37□□□□□ -0.59
PRNP-201ENST00000379440 SMAD7O15105 426 aaKnown RBP11.37□□□□□ -0.59
PRNP-201ENST00000379440 COX8CQ7Z4L0 72 aa11.37□□□□□ -0.59
PRNP-201ENST00000379440 ZNF418Q8TF45 676 aaPredicted RBP11.37□□□□□ -0.59
PRNP-201ENST00000379440 C9orf118A6NHY6 69 aa11.36□□□□□ -0.59
PRNP-201ENST00000379440 RNF183Q96D59 192 aa11.36□□□□□ -0.59
PRNP-201ENST00000379440 RAX2Q96IS3 184 aa11.36□□□□□ -0.59
PRNP-201ENST00000379440 SLC50A1Q9BRV3 221 aa11.36□□□□□ -0.59
PRNP-201ENST00000379440 LYZL1Q6UWQ5 148 aa11.36□□□□□ -0.59
PRNP-201ENST00000379440 OR4X2Q8NGF9 303 aa11.36□□□□□ -0.59
PRNP-201ENST00000379440 USMG5Q96IX5 58 aa11.36□□□□□ -0.59
PRNP-201ENST00000379440 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
PRNP-201ENST00000379440 ABCA12Q86UK0 2595 aa11.35□□□□□ -0.59
PRNP-201ENST00000379440 HSBP1O75506 76 aa11.35□□□□□ -0.59
PRNP-201ENST00000379440 RIGQ13278 110 aa11.35□□□□□ -0.59
PRNP-201ENST00000379440 FA2HQ7L5A8 372 aa11.35□□□□□ -0.59
PRNP-201ENST00000379440 H3BUA1 57 aa11.35□□□□□ -0.59
PRNP-201ENST00000379440 IGLV1-40P01703 118 aa11.35□□□□□ -0.59
PRNP-201ENST00000379440 SEC11AP67812 179 aa11.35□□□□□ -0.59
PRNP-201ENST00000379440 IL17RELQ6ZVW7 336 aa11.35□□□□□ -0.59
PRNP-201ENST00000379440 ZNF575Q86XF7 245 aa11.35□□□□□ -0.59
PRNP-201ENST00000379440 GLMPQ8WWB7 406 aa11.35□□□□□ -0.59
PRNP-201ENST00000379440 NDUFA4O00483 81 aa11.34□□□□□ -0.59
PRNP-201ENST00000379440 OR10AG1Q8NH19 301 aa11.34□□□□□ -0.59
PRNP-201ENST00000379440 AGPAT4-IT1Q9H0P7 198 aa11.34□□□□□ -0.59
PRNP-201ENST00000379440 TMEM213A2RRL7 107 aa11.34□□□□□ -0.59
PRNP-201ENST00000379440 B5MCH6 92 aa11.34□□□□□ -0.59
PRNP-201ENST00000379440 HSPB8Q9UJY1 196 aa11.34□□□□□ -0.59
PRNP-201ENST00000379440 H3BUT2 72 aa11.33□□□□□ -0.59
PRNP-201ENST00000379440 ZNF138P52744 262 aa11.33□□□□□ -0.59
PRNP-201ENST00000379440 CFHR3Q02985 330 aa11.33□□□□□ -0.59
PRNP-201ENST00000379440 C10orf99Q6UWK7 81 aa11.33□□□□□ -0.59
PRNP-201ENST00000379440 NDFIP1Q9BT67 221 aa11.33□□□□□ -0.59
PRNP-201ENST00000379440 H3BRM9 83 aa11.33□□□□□ -0.6
PRNP-201ENST00000379440 M0R2Z0 102 aa11.33□□□□□ -0.6
PRNP-201ENST00000379440 LOXL1Q08397 574 aaPredicted RBP11.33□□□□□ -0.6
PRNP-201ENST00000379440 Q6AWC8 147 aa11.33□□□□□ -0.6
PRNP-201ENST00000379440 C16orf92Q96LL3 132 aa11.33□□□□□ -0.6
PRNP-201ENST00000379440 TP73-AS1Q9UF72 201 aa11.33□□□□□ -0.6
PRNP-201ENST00000379440 RBAKDNA6NC62 111 aa11.32□□□□□ -0.6
PRNP-201ENST00000379440 ORM1P02763 201 aa11.32□□□□□ -0.6
PRNP-201ENST00000379440 IGHV4-31P0DP07 118 aa11.32□□□□□ -0.6
PRNP-201ENST00000379440 FOXI2Q6ZQN5 318 aa11.32□□□□□ -0.6
PRNP-201ENST00000379440 SPCS1Q9Y6A9 102 aa11.32□□□□□ -0.6
PRNP-201ENST00000379440 C20orf173Q96LM9 149 aa11.32□□□□□ -0.6
PRNP-201ENST00000379440 NBPF19A0A087WUL8 3843 aa11.32□□□□□ -0.6
PRNP-201ENST00000379440 FABP5P3A8MUU1 101 aa11.32□□□□□ -0.6
PRNP-201ENST00000379440 J3QLI3 93 aa11.32□□□□□ -0.6
PRNP-201ENST00000379440 DEFB113Q30KQ7 82 aa11.32□□□□□ -0.6
PRNP-201ENST00000379440 GPHB5Q86YW7 130 aa11.32□□□□□ -0.6
PRNP-201ENST00000379440 JMJD8Q96S16 334 aa11.32□□□□□ -0.6
PRNP-201ENST00000379440 NAV2Q8IVL1 2488 aa11.31□□□□□ -0.6
PRNP-201ENST00000379440 A0A0G2JLM5 398 aa11.31□□□□□ -0.6
PRNP-201ENST00000379440 CSN3P07498 182 aa11.31□□□□□ -0.6
PRNP-201ENST00000379440 EDN2P20800 178 aa11.31□□□□□ -0.6
PRNP-201ENST00000379440 GATD1Q8NB37 220 aa11.31□□□□□ -0.6
PRNP-201ENST00000379440 IGKV3-7A0A075B6H7 116 aa11.3□□□□□ -0.6
PRNP-201ENST00000379440 A6NDN8 102 aa11.3□□□□□ -0.6
PRNP-201ENST00000379440 DEFB1P60022 68 aa11.3□□□□□ -0.6
PRNP-201ENST00000379440 TMEM78Q5T7P6 136 aa11.3□□□□□ -0.6
PRNP-201ENST00000379440 EBLN2Q6P2I7 272 aa11.3□□□□□ -0.6
PRNP-201ENST00000379440 Q6ZQT7 251 aa11.3□□□□□ -0.6
PRNP-201ENST00000379440 PSMG3-AS1Q96PY0 264 aa11.3□□□□□ -0.6
PRNP-201ENST00000379440 CR1P17927 2039 aa11.3□□□□□ -0.6
PRNP-201ENST00000379440 FAM181BA6NEQ2 426 aa11.3□□□□□ -0.6
PRNP-201ENST00000379440 RPL11P62913 178 aaKnown RBP11.3□□□□□ -0.6
PRNP-201ENST00000379440 IGLC6P0CF74 106 aa11.29□□□□□ -0.6
PRNP-201ENST00000379440 ZNF493Q6ZR52 646 aa11.29□□□□□ -0.6
PRNP-201ENST00000379440 SPATA12Q7Z6I5 190 aa11.29□□□□□ -0.6
PRNP-201ENST00000379440 AMN1Q8IY45 258 aa11.29□□□□□ -0.6
PRNP-201ENST00000379440 MRPL53Q96EL3 112 aaKnown RBP11.29□□□□□ -0.6
PRNP-201ENST00000379440 ANAPC13Q9BS18 74 aa11.29□□□□□ -0.6
PRNP-201ENST00000379440 C11orf21Q9P2W6 132 aa11.29□□□□□ -0.6
PRNP-201ENST00000379440 SNAI2O43623 268 aa11.29□□□□□ -0.6
PRNP-201ENST00000379440 MSRB1Q9NZV6 116 aa11.29□□□□□ -0.6
PRNP-201ENST00000379440 ZNF469Q96JG9 3925 aaPredicted RBP11.28□□□□□ -0.6
PRNP-201ENST00000379440 OR4C46A6NHA9 309 aa11.28□□□□□ -0.6
PRNP-201ENST00000379440 PSMB8P28062 276 aa11.28□□□□□ -0.6
PRNP-201ENST00000379440 TWIST1Q15672 202 aa11.28□□□□□ -0.6
PRNP-201ENST00000379440 IGKV3D-20A0A0C4DH25 116 aa11.28□□□□□ -0.6
PRNP-201ENST00000379440 IGHV1-24A0A0C4DH33 117 aa11.28□□□□□ -0.6
PRNP-201ENST00000379440 C9orf47Q6ZRZ4 202 aa11.28□□□□□ -0.6
PRNP-201ENST00000379440 C9orf139Q6ZV77 190 aa11.28□□□□□ -0.6
PRNP-201ENST00000379440 Q96MF0 132 aa11.28□□□□□ -0.6
PRNP-201ENST00000379440 RHPN1-AS1Q9BWJ2 59 aa11.28□□□□□ -0.6
PRNP-201ENST00000379440 BEX4Q9NWD9 120 aaPredicted RBP11.28□□□□□ -0.6
PRNP-201ENST00000379440 C2orf70A6NJV1 201 aa11.27□□□□□ -0.6
PRNP-201ENST00000379440 FSHBP01225 129 aa11.27□□□□□ -0.6
PRNP-201ENST00000379440 SPINK8P0C7L1 97 aa11.27□□□□□ -0.6
PRNP-201ENST00000379440 C5orf47Q569G3 176 aa11.27□□□□□ -0.6
PRNP-201ENST00000379440 LINC00173Q6ZV60 143 aa11.27□□□□□ -0.6
PRNP-201ENST00000379440 CHCHD1Q96BP2 118 aaKnown RBP11.27□□□□□ -0.6
PRNP-201ENST00000379440 CYSLTR1Q9Y271 337 aa11.27□□□□□ -0.6
PRNP-201ENST00000379440 MXRA5Q9NR99 2828 aa11.27□□□□□ -0.6
PRNP-201ENST00000379440 TRAV25A0A0B4J276 109 aa11.27□□□□□ -0.61
PRNP-201ENST00000379440 IGHV7-4-1A0A0J9YVY3 117 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms