RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 RUSC1-AS1Q66K80 236 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 OR10J6PQ8NGY7 276 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 DYNLRB2Q8TF09 96 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 CHAC1Q9BUX1 264 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 HIGD1BQ9P298 99 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 ARHGAP32A7KAX9 2087 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 FN1P02751 2386 aaKnown RBP8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 TRBV9A0A0B4J1U6 114 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 FAM90A26D6RGX4 464 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 H3BUX3 64 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 S100A4P26447 101 aaKnown RBP8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 ZNF56Q15929 161 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 CENPWQ5EE01 88 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 USP24Q9UPU5 2620 aa8.56□□□□□ -1.04
PCDHGA1-201ENST00000378105 TRAV41A0A0B4J266 112 aa8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 IGKV1-16P04430 117 aa8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 ARL14EPLP0DKL9 152 aa8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 CIRBPQ14011 172 aaKnown RBP8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 Q96MF0 132 aa8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 IGLV3-1P01715 115 aa8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 C1orf195Q5TG92 126 aa8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 hADV29S1A0JD25 119 aa8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 NPIPB6E9PJ23 425 aa8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 IL4P05112 153 aa8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 C12orf74Q32Q52 190 aa8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 LINC00479Q96M42 142 aa8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 HIST1H4GQ99525 98 aa8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 FOXA2Q9Y261 457 aaPredicted RBP8.55□□□□□ -1.04
PCDHGA1-201ENST00000378105 SLC25A39Q9BZJ4 359 aaPredicted RBP8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 TRGV11A0A075B6L2 103 aa8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 TCRBV4S1A1TA0A5B7 111 aa8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 SCGB1C2P0DMR2 95 aa8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 SAA4P35542 130 aa8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 IGHV1-3A0A0C4DH29 117 aa8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 UPK2O00526 184 aa8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 LOXP28300 417 aaPredicted RBP8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 PMVKQ15126 192 aa8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 PAXXQ9BUH6 204 aa8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 HERVK_113P61574 105 aa8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 CFAP126Q5VTH2 177 aa8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 C11orf53Q8IXP5 236 aa8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 CEND1Q8N111 149 aa8.54□□□□□ -1.04
PCDHGA1-201ENST00000378105 RRHO14718 337 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 TIRAPP58753 221 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 TEN1Q86WV5 123 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 C19orf84I3L1E1 186 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 HIST2H2BCQ6DN03 193 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 CLEC19AQ6UXS0 136 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 BRK1Q8WUW1 75 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 TMEM167BQ9NRX6 74 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 OXTP01178 125 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 IGKV1-5P01602 117 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 ZNF329Q86UD4 541 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 PRO0628Q9UI54 55 aa8.53□□□□□ -1.04
PCDHGA1-201ENST00000378105 IGKV2D-26A0A0A0MRZ7 120 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 H7C2G1 150 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 Q6ZRM9 215 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 GTSCR1Q86UQ5 136 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 PHLDA1Q8WV24 401 aaPredicted RBP8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 CTSZQ9UBR2 303 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 MSMBP08118 114 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 ID3Q02535 119 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 IFI27L2Q9H2X8 130 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 HHLA3Q9XRX5 114 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 TRAV2A0A0B4J234 112 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 A8MWV9 139 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 BUB1B-PAK6H3BSN5 160 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 DSCR9P59020 149 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 ZNF256Q9Y2P7 627 aaPredicted RBP8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 CSMD3Q7Z407 3707 aa8.52□□□□□ -1.05
PCDHGA1-201ENST00000378105 TRRAPQ9Y4A5 3859 aa8.51□□□□□ -1.05
PCDHGA1-201ENST00000378105 TMEM213A2RRL7 107 aa8.51□□□□□ -1.05
PCDHGA1-201ENST00000378105 C15orf61A6NNL5 157 aa8.51□□□□□ -1.05
PCDHGA1-201ENST00000378105 CDSNQ15517 529 aa8.51□□□□□ -1.05
PCDHGA1-201ENST00000378105 C11orf1Q9H5F2 150 aa8.51□□□□□ -1.05
PCDHGA1-201ENST00000378105 ZANQ9Y493 2812 aa8.51□□□□□ -1.05
PCDHGA1-201ENST00000378105 IGKV3-20P01619 116 aa8.51□□□□□ -1.05
PCDHGA1-201ENST00000378105 RRN3P1Q2M238 152 aa8.51□□□□□ -1.05
PCDHGA1-201ENST00000378105 SLC25A48Q6ZT89 311 aaKnown RBP8.51□□□□□ -1.05
PCDHGA1-201ENST00000378105 CRXO43186 299 aaPredicted RBP8.51□□□□□ -1.05
PCDHGA1-201ENST00000378105 METTL26Q96S19 204 aa8.51□□□□□ -1.05
PCDHGA1-201ENST00000378105 TPSG1Q9NRR2 321 aa8.51□□□□□ -1.05
PCDHGA1-201ENST00000378105 GGTLC3B5MD39 225 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 DTX2Q86UW9 622 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 MDFICQ9P1T7 246 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 DKK2Q9UBU2 259 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 PGPA6NDG6 321 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 MALP21145 153 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 MYCNOSP40205 109 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 C1orf159Q96HA4 380 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 HECTD1Q9ULT8 2610 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 TMEM89A2RUT3 159 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 DUSP14O95147 198 aaKnown RBP8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 ZNF134P52741 427 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 LINC01545Q5VT33 79 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 TMEM86BQ8N661 226 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 PRSS3P2Q8NHM4 247 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 C16orf92Q96LL3 132 aa8.5□□□□□ -1.05
PCDHGA1-201ENST00000378105 TRBV6-6A0A0A6YYG2 114 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms