RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 J3KRW8 73 aa19.26■□□□□ 0.67
C9orf40-201ENST00000376854 IGHV1-69P01742 117 aa19.26■□□□□ 0.67
C9orf40-201ENST00000376854 PIEZO1Q92508 2521 aa19.26■□□□□ 0.67
C9orf40-201ENST00000376854 TMEM8BA6NDV4 472 aa19.26■□□□□ 0.67
C9orf40-201ENST00000376854 TRBV12-3P01733 135 aa19.26■□□□□ 0.67
C9orf40-201ENST00000376854 MYOZ3Q8TDC0 251 aa19.26■□□□□ 0.67
C9orf40-201ENST00000376854 TTTY13Q9BZ97 58 aa19.26■□□□□ 0.67
C9orf40-201ENST00000376854 NAA38Q9BRA0 125 aaKnown RBP19.25■□□□□ 0.67
C9orf40-201ENST00000376854 GTF2H5Q6ZYL4 71 aa19.25■□□□□ 0.67
C9orf40-201ENST00000376854 GTSCR1Q86UQ5 136 aa19.25■□□□□ 0.67
C9orf40-201ENST00000376854 A0A0G2JLM5 398 aa19.24■□□□□ 0.67
C9orf40-201ENST00000376854 GPHB5Q86YW7 130 aa19.24■□□□□ 0.67
C9orf40-201ENST00000376854 RAB37Q96AX2 223 aa19.24■□□□□ 0.67
C9orf40-201ENST00000376854 FLNCQ14315 2725 aa19.24■□□□□ 0.67
C9orf40-201ENST00000376854 TRAV40A0A0B4J280 105 aa19.24■□□□□ 0.67
C9orf40-201ENST00000376854 TM4SF20Q53R12 229 aa19.24■□□□□ 0.67
C9orf40-201ENST00000376854 ZC2HC1BQ5TFG8 222 aa19.24■□□□□ 0.67
C9orf40-201ENST00000376854 UFSP1Q6NVU6 142 aa19.24■□□□□ 0.67
C9orf40-201ENST00000376854 LINC00477Q96M19 166 aa19.24■□□□□ 0.67
C9orf40-201ENST00000376854 SRSF1Q07955 248 aaKnown RBP eCLIP19.23■□□□□ 0.67
C9orf40-201ENST00000376854 MRAP2Q96G30 205 aa19.23■□□□□ 0.67
C9orf40-201ENST00000376854 TMEM160Q9NX00 188 aa19.23■□□□□ 0.67
C9orf40-201ENST00000376854 NDUFA4O00483 81 aa19.23■□□□□ 0.67
C9orf40-201ENST00000376854 OR10J6PQ8NGY7 276 aa19.23■□□□□ 0.67
C9orf40-201ENST00000376854 HIGD1BQ9P298 99 aa19.23■□□□□ 0.67
C9orf40-201ENST00000376854 ZFAND2AQ8N6M9 145 aa19.22■□□□□ 0.67
C9orf40-201ENST00000376854 MRPL35Q9NZE8 188 aaKnown RBP19.22■□□□□ 0.67
C9orf40-201ENST00000376854 CELSR2Q9HCU4 2923 aa19.21■□□□□ 0.67
C9orf40-201ENST00000376854 OVOL1O14753 267 aa19.2■□□□□ 0.66
C9orf40-201ENST00000376854 CHAC1Q9BUX1 264 aa19.2■□□□□ 0.66
C9orf40-201ENST00000376854 TRAV21A0A0B4J279 112 aa19.2■□□□□ 0.66
C9orf40-201ENST00000376854 IGHV4-61A0A0C4DH41 118 aa19.2■□□□□ 0.66
C9orf40-201ENST00000376854 SOCS3O14543 225 aa19.2■□□□□ 0.66
C9orf40-201ENST00000376854 GCSHP23434 173 aa19.2■□□□□ 0.66
C9orf40-201ENST00000376854 K7EP34 96 aa19.19■□□□□ 0.66
C9orf40-201ENST00000376854 M0R381 172 aa19.19■□□□□ 0.66
C9orf40-201ENST00000376854 DEFB1P60022 68 aa19.19■□□□□ 0.66
C9orf40-201ENST00000376854 LY6EQ16553 131 aa19.19■□□□□ 0.66
C9orf40-201ENST00000376854 SMIM2Q9BVW6 85 aa19.19■□□□□ 0.66
C9orf40-201ENST00000376854 MEGF9Q9H1U4 602 aa19.19■□□□□ 0.66
C9orf40-201ENST00000376854 TRBV25-1A0A075B6N4 114 aa19.18■□□□□ 0.66
C9orf40-201ENST00000376854 SPRY2O43597 315 aa19.18■□□□□ 0.66
C9orf40-201ENST00000376854 IGHV3-11P01762 117 aa19.18■□□□□ 0.66
C9orf40-201ENST00000376854 S100A4P26447 101 aaKnown RBP19.18■□□□□ 0.66
C9orf40-201ENST00000376854 SPG11Q96JI7 2443 aa19.18■□□□□ 0.66
C9orf40-201ENST00000376854 A0A087WX48 190 aa19.18■□□□□ 0.66
C9orf40-201ENST00000376854 RPL11P62913 178 aaKnown RBP19.18■□□□□ 0.66
C9orf40-201ENST00000376854 UTP20O75691 2785 aaKnown RBP19.17■□□□□ 0.66
C9orf40-201ENST00000376854 USMG5Q96IX5 58 aa19.17■□□□□ 0.66
C9orf40-201ENST00000376854 IGSF10Q6WRI0 2623 aa19.17■□□□□ 0.66
C9orf40-201ENST00000376854 SMIM13P0DJ93 91 aa19.17■□□□□ 0.66
C9orf40-201ENST00000376854 ASIPP42127 132 aa19.17■□□□□ 0.66
C9orf40-201ENST00000376854 FXYD2P54710 66 aa19.17■□□□□ 0.66
C9orf40-201ENST00000376854 SELENOKQ9Y6D0 94 aa19.17■□□□□ 0.66
C9orf40-201ENST00000376854 A0A1W2PPM0 123 aa19.16■□□□□ 0.66
C9orf40-201ENST00000376854 IGHV4-38-2P0DP08 117 aa19.16■□□□□ 0.66
C9orf40-201ENST00000376854 HLA-DRB4P13762 266 aa19.16■□□□□ 0.66
C9orf40-201ENST00000376854 PIMREGQ9BSJ6 248 aa19.16■□□□□ 0.66
C9orf40-201ENST00000376854 HLA-DRB4X5D2U9 266 aa19.16■□□□□ 0.66
C9orf40-201ENST00000376854 CACNA1AO00555 2505 aa19.16■□□□□ 0.66
C9orf40-201ENST00000376854 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.16■□□□□ 0.66
C9orf40-201ENST00000376854 IGHG2P01859 326 aa19.15■□□□□ 0.66
C9orf40-201ENST00000376854 ANXA2RQ3ZCQ2 193 aa19.15■□□□□ 0.66
C9orf40-201ENST00000376854 VPS25Q9BRG1 176 aa19.15■□□□□ 0.66
C9orf40-201ENST00000376854 KLK15Q9H2R5 256 aa19.15■□□□□ 0.66
C9orf40-201ENST00000376854 PHLDA3Q9Y5J5 127 aa19.15■□□□□ 0.66
C9orf40-201ENST00000376854 H3BUA1 57 aa19.14■□□□□ 0.66
C9orf40-201ENST00000376854 RNASE4P34096 147 aaKnown RBP19.14■□□□□ 0.66
C9orf40-201ENST00000376854 RASL10AQ92737 203 aa19.14■□□□□ 0.66
C9orf40-201ENST00000376854 DPH3P1Q9H4G8 78 aa19.14■□□□□ 0.66
C9orf40-201ENST00000376854 H3BUX3 64 aa19.14■□□□□ 0.65
C9orf40-201ENST00000376854 PF4V1P10720 104 aa19.14■□□□□ 0.65
C9orf40-201ENST00000376854 PLNP26678 52 aa19.14■□□□□ 0.65
C9orf40-201ENST00000376854 SUMO2P61956 95 aaKnown RBP19.14■□□□□ 0.65
C9orf40-201ENST00000376854 C14orf178Q8N769 122 aaPredicted RBP19.14■□□□□ 0.65
C9orf40-201ENST00000376854 F6UB75 175 aa19.13■□□□□ 0.65
C9orf40-201ENST00000376854 K7ERU9 68 aa19.13■□□□□ 0.65
C9orf40-201ENST00000376854 USP9XQ93008 2570 aaPredicted RBP19.13■□□□□ 0.65
C9orf40-201ENST00000376854 IGKV3-7A0A075B6H7 116 aa19.13■□□□□ 0.65
C9orf40-201ENST00000376854 BRI3O95415 125 aa19.13■□□□□ 0.65
C9orf40-201ENST00000376854 ORMDL2Q53FV1 153 aa19.13■□□□□ 0.65
C9orf40-201ENST00000376854 FAM19A4Q96LR4 140 aa19.13■□□□□ 0.65
C9orf40-201ENST00000376854 CCL19Q99731 98 aa19.13■□□□□ 0.65
C9orf40-201ENST00000376854 SPCS1Q9Y6A9 102 aa19.13■□□□□ 0.65
C9orf40-201ENST00000376854 CRYBG3Q68DQ2 2970 aa19.13■□□□□ 0.65
C9orf40-201ENST00000376854 MAPKAPK5-AS1Q8N8E1 139 aa19.12■□□□□ 0.65
C9orf40-201ENST00000376854 RPL39LQ96EH5 51 aaKnown RBP19.12■□□□□ 0.65
C9orf40-201ENST00000376854 C20orf78Q9BR46 151 aa19.12■□□□□ 0.65
C9orf40-201ENST00000376854 SAMD5Q5TGI4 173 aa19.11■□□□□ 0.65
C9orf40-201ENST00000376854 A6NDX4 124 aa19.11■□□□□ 0.65
C9orf40-201ENST00000376854 FABP2P12104 132 aa19.11■□□□□ 0.65
C9orf40-201ENST00000376854 BLCAPP62952 87 aa19.11■□□□□ 0.65
C9orf40-201ENST00000376854 LCNL1Q6ZST4 164 aa19.11■□□□□ 0.65
C9orf40-201ENST00000376854 C10orf105Q8TEF2 133 aa19.11■□□□□ 0.65
C9orf40-201ENST00000376854 SCGB3A1Q96QR1 104 aa19.11■□□□□ 0.65
C9orf40-201ENST00000376854 RHPN1-AS1Q9BWJ2 59 aa19.11■□□□□ 0.65
C9orf40-201ENST00000376854 TRAV12-1A0A0B4J245 112 aa19.1■□□□□ 0.65
C9orf40-201ENST00000376854 H7C1H1 209 aa19.1■□□□□ 0.65
C9orf40-201ENST00000376854 MGPP08493 103 aa19.1■□□□□ 0.65
C9orf40-201ENST00000376854 CEND1Q8N111 149 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms