RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 IGKV1D-39P04432 117 aa9.34□□□□□ -0.91
VPS13A-205ENST00000376636 IGLV3-12A0A075B6K2 115 aa9.34□□□□□ -0.91
VPS13A-205ENST00000376636 FOXI2Q6ZQN5 318 aa9.34□□□□□ -0.91
VPS13A-205ENST00000376636 PRR25Q96S07 402 aa9.34□□□□□ -0.91
VPS13A-205ENST00000376636 COX7B2Q8TF08 81 aa9.34□□□□□ -0.91
VPS13A-205ENST00000376636 TFF1P04155 84 aa9.34□□□□□ -0.91
VPS13A-205ENST00000376636 MRPL53Q96EL3 112 aaKnown RBP9.34□□□□□ -0.91
VPS13A-205ENST00000376636 CR1LQ2VPA4 569 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 BRD3OSQ6XYD6 125 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 IGFL4Q6B9Z1 124 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 V9GYY9 64 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 TMEM256-PLSCR3K7ERE1 68 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 IGKV1-16P04430 117 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 MST1LQ2TV78 715 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 KIF26AQ9ULI4 1882 aaPredicted RBP9.33□□□□□ -0.92
VPS13A-205ENST00000376636 FAM110DQ8TAY7 271 aaPredicted RBP9.33□□□□□ -0.92
VPS13A-205ENST00000376636 V9GYV3 84 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 SIP14410 1827 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 CSPG4Q6UVK1 2322 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 CLPSL2Q6UWE3 100 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 U3KQE9 123 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 NDUFA4O00483 81 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 C9orf47Q6ZRZ4 202 aa9.33□□□□□ -0.92
VPS13A-205ENST00000376636 PLXNA4Q9HCM2 1894 aa9.32□□□□□ -0.92
VPS13A-205ENST00000376636 IGKV1-27A0A075B6S5 117 aa9.32□□□□□ -0.92
VPS13A-205ENST00000376636 KIR2DL5BA0A0G2JN68 375 aa9.32□□□□□ -0.92
VPS13A-205ENST00000376636 KIR2DL5BA0A0G2JPC4 375 aa9.32□□□□□ -0.92
VPS13A-205ENST00000376636 KIR2DL5AQ8N109 375 aa9.32□□□□□ -0.92
VPS13A-205ENST00000376636 CASC2Q6XLA1 102 aa9.32□□□□□ -0.92
VPS13A-205ENST00000376636 NAV3Q8IVL0 2385 aa9.32□□□□□ -0.92
VPS13A-205ENST00000376636 THSD7AQ9UPZ6 1657 aa9.32□□□□□ -0.92
VPS13A-205ENST00000376636 GATA4P43694 442 aa9.32□□□□□ -0.92
VPS13A-205ENST00000376636 GAFA1Q96PS6 74 aa9.32□□□□□ -0.92
VPS13A-205ENST00000376636 GFI1Q99684 422 aa9.32□□□□□ -0.92
VPS13A-205ENST00000376636 IGHV3-38A0A0C4DH36 116 aa9.31□□□□□ -0.92
VPS13A-205ENST00000376636 NDUFS7O75251 213 aa9.31□□□□□ -0.92
VPS13A-205ENST00000376636 CCL25O15444 150 aa9.31□□□□□ -0.92
VPS13A-205ENST00000376636 NDUFA4L2Q9NRX3 87 aa9.31□□□□□ -0.92
VPS13A-205ENST00000376636 IGKV4-1P06312 121 aa9.31□□□□□ -0.92
VPS13A-205ENST00000376636 IGKV1-12A0A0C4DH73 117 aa9.31□□□□□ -0.92
VPS13A-205ENST00000376636 LTAP01374 205 aa9.31□□□□□ -0.92
VPS13A-205ENST00000376636 IGKV1D-12P01611 117 aa9.31□□□□□ -0.92
VPS13A-205ENST00000376636 CYYR1Q96J86 154 aa9.31□□□□□ -0.92
VPS13A-205ENST00000376636 DAZ2Q13117 558 aaKnown RBP9.31□□□□□ -0.92
VPS13A-205ENST00000376636 DAZ4Q86SG3 579 aaKnown RBP9.31□□□□□ -0.92
VPS13A-205ENST00000376636 DAZ3Q9NR90 486 aaKnown RBP9.31□□□□□ -0.92
VPS13A-205ENST00000376636 CRYGBP07316 175 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 ADCYAP1P18509 176 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 UBE2E1P51965 193 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 ADAMTS7Q9UKP4 1686 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 IGLC7A0M8Q6 106 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 C5orf63A6NC05 138 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 FOXE3Q13461 319 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 IGHV2-70DA0A0C4DH43 119 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 FAM240AA0A1B0GVK7 77 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 IGKV3D-7A0A0C4DH55 119 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 RBAKDNA6NC62 111 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 ATP5EP56381 51 aaPredicted RBP9.3□□□□□ -0.92
VPS13A-205ENST00000376636 OTOGLQ3ZCN5 2332 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 ZFP36L1Q07352 338 aaKnown RBP9.3□□□□□ -0.92
VPS13A-205ENST00000376636 SND1-IT1Q9HBX3 110 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 IGHV4-4A0A075B6R2 117 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 ATP6V0E1O15342 81 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 TRBV12-3P01733 135 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 CFHR1Q03591 330 aa9.3□□□□□ -0.92
VPS13A-205ENST00000376636 A0A1B0GUS0 222 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 DUX4L9Q6RFH8 374 aaPredicted RBP9.29□□□□□ -0.92
VPS13A-205ENST00000376636 TIMM17AQ99595 171 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 CXCL5P42830 114 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 Q6P435 159 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 TRAV4A0A0B4J268 109 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 WIPF2Q8TF74 440 aaPredicted RBP9.29□□□□□ -0.92
VPS13A-205ENST00000376636 ZC2HC1AQ96GY0 325 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 ADAMTS9Q9P2N4 1935 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 ATP6V0E2Q8NHE4 81 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 DSCAMO60469 2012 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 IGHV1-69DA0A0B4J2H0 117 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 H3BRN7 92 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 EFNA2O43921 213 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 GGNQ86UU5 652 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 C11orf52Q96A22 123 aa9.29□□□□□ -0.92
VPS13A-205ENST00000376636 UBE2AP49459 152 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 H0Y9J4 135 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 TET2Q6N021 2002 aaPredicted RBP9.28□□□□□ -0.92
VPS13A-205ENST00000376636 IGLV3-19P01714 112 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 TMEM61Q8N0U2 210 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 USP17L23D6RBM5 183 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 HIST2H2BCQ6DN03 193 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 COX7A2LO14548 114 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 CSRP3P50461 194 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 CAMK2N2Q96S95 79 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 DKK2Q9UBU2 259 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 TGFBR3LH3BV60 316 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 IGKV1D-17A0A075B6S4 117 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 LGALS9O00182 355 aa9.28□□□□□ -0.92
VPS13A-205ENST00000376636 RNASE13Q5GAN3 156 aaKnown RBP9.28□□□□□ -0.92
VPS13A-205ENST00000376636 KIAA1549LQ6ZVL6 1849 aa9.27□□□□□ -0.92
VPS13A-205ENST00000376636 KLF2Q9Y5W3 355 aaPredicted RBP9.27□□□□□ -0.92
VPS13A-205ENST00000376636 LENEPQ9Y5L5 61 aa9.27□□□□□ -0.93
VPS13A-205ENST00000376636 IGKV1OR2-108A0A075B7D4 117 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms