RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 MRPL51Q4U2R6 128 aaKnown RBP10.02□□□□□ -0.81
VPS13A-204ENST00000376634 LYPD2Q6UXB3 125 aa10.02□□□□□ -0.81
VPS13A-204ENST00000376634 TRAV12-2A0A075B6T6 113 aa10.01□□□□□ -0.81
VPS13A-204ENST00000376634 YPEL3P61236 119 aaPredicted RBP10.01□□□□□ -0.81
VPS13A-204ENST00000376634 K7ERJ3 54 aa10.01□□□□□ -0.81
VPS13A-204ENST00000376634 COL8A2P25067 703 aa10.01□□□□□ -0.81
VPS13A-204ENST00000376634 BVES-AS1Q5T3Y7 98 aa10.01□□□□□ -0.81
VPS13A-204ENST00000376634 CD59P13987 128 aa10.01□□□□□ -0.81
VPS13A-204ENST00000376634 FAM110DQ8TAY7 271 aaPredicted RBP10.01□□□□□ -0.81
VPS13A-204ENST00000376634 LYPD3O95274 346 aa10.01□□□□□ -0.81
VPS13A-204ENST00000376634 COX8AP10176 69 aa10.01□□□□□ -0.81
VPS13A-204ENST00000376634 CFPP27918 469 aa10.01□□□□□ -0.81
VPS13A-204ENST00000376634 XCL1P47992 114 aa10.01□□□□□ -0.81
VPS13A-204ENST00000376634 CRYBA4P53673 196 aa10.01□□□□□ -0.81
VPS13A-204ENST00000376634 DEFB105AQ8NG35 78 aa10.01□□□□□ -0.81
VPS13A-204ENST00000376634 IGHV2-70DA0A0C4DH43 119 aa10□□□□□ -0.81
VPS13A-204ENST00000376634 MDS2Q8NDY4 140 aa10□□□□□ -0.81
VPS13A-204ENST00000376634 Q96MF0 132 aa10□□□□□ -0.81
VPS13A-204ENST00000376634 IGHV1-69DA0A0B4J2H0 117 aa10□□□□□ -0.81
VPS13A-204ENST00000376634 IGHV1-69P01742 117 aa10□□□□□ -0.81
VPS13A-204ENST00000376634 CYTL1Q9NRR1 136 aa10□□□□□ -0.81
VPS13A-204ENST00000376634 ZNRF2Q8NHG8 242 aa10□□□□□ -0.81
VPS13A-204ENST00000376634 IGHV3-38A0A0C4DH36 116 aa10□□□□□ -0.81
VPS13A-204ENST00000376634 REG4Q9BYZ8 158 aa10□□□□□ -0.81
VPS13A-204ENST00000376634 CRYGCP07315 174 aa10□□□□□ -0.81
VPS13A-204ENST00000376634 C18orf32Q8TCD1 76 aa10□□□□□ -0.81
VPS13A-204ENST00000376634 MP68P56378 58 aa10□□□□□ -0.81
VPS13A-204ENST00000376634 NDUFA4O00483 81 aa9.99□□□□□ -0.81
VPS13A-204ENST00000376634 IGKV2D-24A0A075B6R9 120 aa9.99□□□□□ -0.81
VPS13A-204ENST00000376634 IGKV1-39P01597 117 aa9.99□□□□□ -0.81
VPS13A-204ENST00000376634 IGKV1D-39P04432 117 aa9.99□□□□□ -0.81
VPS13A-204ENST00000376634 IGLC2P0DOY2 106 aa9.99□□□□□ -0.81
VPS13A-204ENST00000376634 IGLC3P0DOY3 106 aa9.99□□□□□ -0.81
VPS13A-204ENST00000376634 NDUFA4L2Q9NRX3 87 aa9.99□□□□□ -0.81
VPS13A-204ENST00000376634 F6UB75 175 aa9.99□□□□□ -0.81
VPS13A-204ENST00000376634 H3BMG7 143 aa9.99□□□□□ -0.81
VPS13A-204ENST00000376634 LYL1P12980 280 aa9.99□□□□□ -0.81
VPS13A-204ENST00000376634 KLHDC3Q9BQ90 382 aa9.98□□□□□ -0.81
VPS13A-204ENST00000376634 F8VRH5 84 aa9.98□□□□□ -0.81
VPS13A-204ENST00000376634 J3QLI3 93 aa9.98□□□□□ -0.81
VPS13A-204ENST00000376634 C8orf31Q8N9H6 132 aa9.98□□□□□ -0.81
VPS13A-204ENST00000376634 C15orf53Q8NAA6 179 aa9.98□□□□□ -0.81
VPS13A-204ENST00000376634 Q0VFX4 171 aa9.98□□□□□ -0.81
VPS13A-204ENST00000376634 TRBV19A0A075B6N1 114 aa9.98□□□□□ -0.81
VPS13A-204ENST00000376634 E7EQL1 145 aa9.98□□□□□ -0.81
VPS13A-204ENST00000376634 SMIM27A0A1W2PRY6 76 aa9.98□□□□□ -0.81
VPS13A-204ENST00000376634 POU2AF1Q16633 256 aa9.98□□□□□ -0.81
VPS13A-204ENST00000376634 ZNF833PQ6ZTB9 187 aa9.98□□□□□ -0.81
VPS13A-204ENST00000376634 J3QQQ9 107 aa9.97□□□□□ -0.81
VPS13A-204ENST00000376634 MAPK1IP1LQ8NDC0 245 aa9.97□□□□□ -0.81
VPS13A-204ENST00000376634 TEX36Q5VZQ5 186 aa9.97□□□□□ -0.81
VPS13A-204ENST00000376634 RS1O15537 224 aa9.97□□□□□ -0.81
VPS13A-204ENST00000376634 VWCEQ96DN2 955 aa9.97□□□□□ -0.81
VPS13A-204ENST00000376634 J3KT08 172 aa9.97□□□□□ -0.81
VPS13A-204ENST00000376634 RHOHQ15669 191 aa9.97□□□□□ -0.81
VPS13A-204ENST00000376634 SLC25A29Q8N8R3 303 aa9.97□□□□□ -0.81
VPS13A-204ENST00000376634 SPATA25Q9BR10 227 aa9.97□□□□□ -0.81
VPS13A-204ENST00000376634 TMEM14CQ9P0S9 112 aa9.97□□□□□ -0.81
VPS13A-204ENST00000376634 ACYP1P07311 99 aa9.96□□□□□ -0.81
VPS13A-204ENST00000376634 MST1P26927 711 aa9.96□□□□□ -0.81
VPS13A-204ENST00000376634 SIGLEC8Q9NYZ4 499 aa9.96□□□□□ -0.81
VPS13A-204ENST00000376634 C14orf132Q9NPU4 83 aa9.96□□□□□ -0.81
VPS13A-204ENST00000376634 SS18L2Q9UHA2 77 aa9.96□□□□□ -0.81
VPS13A-204ENST00000376634 RNASE13Q5GAN3 156 aaKnown RBP9.96□□□□□ -0.81
VPS13A-204ENST00000376634 Q71RC1 249 aaPredicted RBP9.96□□□□□ -0.81
VPS13A-204ENST00000376634 H3BQ85 93 aa9.96□□□□□ -0.82
VPS13A-204ENST00000376634 TIRAPP58753 221 aa9.96□□□□□ -0.82
VPS13A-204ENST00000376634 SEC61GP60059 68 aa9.96□□□□□ -0.82
VPS13A-204ENST00000376634 QRFPP83859 136 aa9.96□□□□□ -0.82
VPS13A-204ENST00000376634 NOP10Q9NPE3 64 aaKnown RBP9.96□□□□□ -0.82
VPS13A-204ENST00000376634 ETDCA0A1B0GVM5 59 aa9.96□□□□□ -0.82
VPS13A-204ENST00000376634 MRPL53Q96EL3 112 aaKnown RBP9.96□□□□□ -0.82
VPS13A-204ENST00000376634 LINC00205P59089 165 aa9.96□□□□□ -0.82
VPS13A-204ENST00000376634 A0A096LPF7 62 aa9.96□□□□□ -0.82
VPS13A-204ENST00000376634 A0A1B0GUS0 222 aa9.96□□□□□ -0.82
VPS13A-204ENST00000376634 LINC01545Q5VT33 79 aa9.96□□□□□ -0.82
VPS13A-204ENST00000376634 IGKV1OR2-108A0A075B7D4 117 aa9.95□□□□□ -0.82
VPS13A-204ENST00000376634 CYYR1Q96J86 154 aa9.95□□□□□ -0.82
VPS13A-204ENST00000376634 PRB2P02812 416 aaPredicted RBP9.95□□□□□ -0.82
VPS13A-204ENST00000376634 BAALC-AS2P0C853 105 aa9.95□□□□□ -0.82
VPS13A-204ENST00000376634 ZC2HC1AQ96GY0 325 aa9.95□□□□□ -0.82
VPS13A-204ENST00000376634 MESP1Q9BRJ9 268 aa9.95□□□□□ -0.82
VPS13A-204ENST00000376634 JMJD1CQ15652 2540 aa9.95□□□□□ -0.82
VPS13A-204ENST00000376634 Q9HAA7 133 aa9.95□□□□□ -0.82
VPS13A-204ENST00000376634 NCOR2Q9Y618 2525 aa9.95□□□□□ -0.82
VPS13A-204ENST00000376634 IGHV7-4-1A0A0J9YVY3 117 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 G3V318 75 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 NPSP0C0P6 89 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 ZNF503Q96F45 646 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 USP9XQ93008 2570 aaPredicted RBP9.94□□□□□ -0.82
VPS13A-204ENST00000376634 C20orf78Q9BR46 151 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 IGHV4-4A0A075B6R2 117 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 Q8TCH9 128 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 SPTBN4Q9H254 2564 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 K7EMI3 77 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 BUB3O43684 328 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 NDUFB1O75438 58 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 LGALS9BQ3B8N2 356 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 LGALS9CQ6DKI2 356 aa9.94□□□□□ -0.82
VPS13A-204ENST00000376634 ATOX1O00244 68 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms