RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 SPCS1Q9Y6A9 102 aa9.46□□□□□ -0.89
TNFSF13B-201ENST00000375887 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.46□□□□□ -0.9
TNFSF13B-201ENST00000375887 TMEM8BA6NDV4 472 aa9.46□□□□□ -0.9
TNFSF13B-201ENST00000375887 NPFFO15130 113 aa9.46□□□□□ -0.9
TNFSF13B-201ENST00000375887 TRBV12-3P01733 135 aa9.46□□□□□ -0.9
TNFSF13B-201ENST00000375887 SCGB1A1P11684 91 aa9.46□□□□□ -0.9
TNFSF13B-201ENST00000375887 C9orf47Q6ZRZ4 202 aa9.46□□□□□ -0.9
TNFSF13B-201ENST00000375887 PIFOQ8TCI5 191 aa9.46□□□□□ -0.9
TNFSF13B-201ENST00000375887 TRBV7-1A0A0A6YYK4 115 aa9.45□□□□□ -0.9
TNFSF13B-201ENST00000375887 IGKCP01834 107 aa9.45□□□□□ -0.9
TNFSF13B-201ENST00000375887 EFNA4P52798 201 aa9.45□□□□□ -0.9
TNFSF13B-201ENST00000375887 FXYD2P54710 66 aa9.45□□□□□ -0.9
TNFSF13B-201ENST00000375887 UNQ9165/PRO28630Q6UXU0 137 aa9.45□□□□□ -0.9
TNFSF13B-201ENST00000375887 COL25A1Q9BXS0 654 aaPredicted RBP9.45□□□□□ -0.9
TNFSF13B-201ENST00000375887 TRAV40A0A0B4J280 105 aa9.45□□□□□ -0.9
TNFSF13B-201ENST00000375887 H3BVH4 76 aa9.45□□□□□ -0.9
TNFSF13B-201ENST00000375887 C19orf84I3L1E1 186 aa9.45□□□□□ -0.9
TNFSF13B-201ENST00000375887 ZC2HC1BQ5TFG8 222 aa9.45□□□□□ -0.9
TNFSF13B-201ENST00000375887 MRPL35Q9NZE8 188 aaKnown RBP9.45□□□□□ -0.9
TNFSF13B-201ENST00000375887 A0A1W2PPM0 123 aa9.44□□□□□ -0.9
TNFSF13B-201ENST00000375887 ATP5G2Q06055 141 aa9.44□□□□□ -0.9
TNFSF13B-201ENST00000375887 GPHB5Q86YW7 130 aa9.44□□□□□ -0.9
TNFSF13B-201ENST00000375887 TMEM160Q9NX00 188 aa9.44□□□□□ -0.9
TNFSF13B-201ENST00000375887 AGRNO00468 2067 aa9.44□□□□□ -0.9
TNFSF13B-201ENST00000375887 FABP2P12104 132 aa9.44□□□□□ -0.9
TNFSF13B-201ENST00000375887 RPL24P83731 157 aaKnown RBP9.44□□□□□ -0.9
TNFSF13B-201ENST00000375887 SPANXN1Q5VSR9 72 aa9.44□□□□□ -0.9
TNFSF13B-201ENST00000375887 GLMPQ8WWB7 406 aa9.44□□□□□ -0.9
TNFSF13B-201ENST00000375887 C16orf92Q96LL3 132 aa9.44□□□□□ -0.9
TNFSF13B-201ENST00000375887 SIGMAR1Q99720 223 aa9.44□□□□□ -0.9
TNFSF13B-201ENST00000375887 TRBV25-1A0A075B6N4 114 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 A0A1B0GV72 72 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 K7ERJ3 54 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 AZU1P20160 251 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 GCSHP23434 173 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 LY6EQ16553 131 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 C19orf54Q5BKX5 351 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 MAPKAPK5-AS1Q8N8E1 139 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 MRPL53Q96EL3 112 aaKnown RBP9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 IGHV4-4A0A075B6R2 117 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 DPM2O94777 84 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 IGHV3-11P01762 117 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 LAGE3Q14657 143 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 CSPG4Q6UVK1 2322 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 ITLN2Q8WWU7 325 aaPredicted RBP9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 WFDC12Q8WWY7 111 aa9.43□□□□□ -0.9
TNFSF13B-201ENST00000375887 FLNCQ14315 2725 aa9.42□□□□□ -0.9
TNFSF13B-201ENST00000375887 TRAV41A0A0B4J266 112 aa9.42□□□□□ -0.9
TNFSF13B-201ENST00000375887 PRSS47A8MTI9 375 aa9.42□□□□□ -0.9
TNFSF13B-201ENST00000375887 CHAC1Q9BUX1 264 aa9.42□□□□□ -0.9
TNFSF13B-201ENST00000375887 TMEM238LA0A1B0GVL6 79 aa9.42□□□□□ -0.9
TNFSF13B-201ENST00000375887 F6UB75 175 aa9.42□□□□□ -0.9
TNFSF13B-201ENST00000375887 SRD5A1P18405 259 aa9.42□□□□□ -0.9
TNFSF13B-201ENST00000375887 ZFAND2AQ8N6M9 145 aa9.42□□□□□ -0.9
TNFSF13B-201ENST00000375887 GTSF1LQ9H1H1 148 aa9.42□□□□□ -0.9
TNFSF13B-201ENST00000375887 KLK15Q9H2R5 256 aa9.42□□□□□ -0.9
TNFSF13B-201ENST00000375887 HIF1ANQ9NWT6 349 aa9.42□□□□□ -0.9
TNFSF13B-201ENST00000375887 SMPXQ9UHP9 88 aa9.42□□□□□ -0.9
TNFSF13B-201ENST00000375887 ATP5LO75964 103 aa9.41□□□□□ -0.9
TNFSF13B-201ENST00000375887 SMAGPQ0VAQ4 97 aa9.41□□□□□ -0.9
TNFSF13B-201ENST00000375887 HIGD1BQ9P298 99 aa9.41□□□□□ -0.9
TNFSF13B-201ENST00000375887 EDN2P20800 178 aa9.41□□□□□ -0.9
TNFSF13B-201ENST00000375887 RPL11P62913 178 aaKnown RBP9.41□□□□□ -0.9
TNFSF13B-201ENST00000375887 Q6ZS46 218 aa9.41□□□□□ -0.9
TNFSF13B-201ENST00000375887 CLUHP3Q96NS8 147 aa9.41□□□□□ -0.9
TNFSF13B-201ENST00000375887 CFAP46Q8IYW2 2715 aa9.4□□□□□ -0.9
TNFSF13B-201ENST00000375887 TEX48A0A1B0GUV7 120 aa9.4□□□□□ -0.9
TNFSF13B-201ENST00000375887 M0R381 172 aa9.4□□□□□ -0.9
TNFSF13B-201ENST00000375887 ARL3P36405 182 aa9.4□□□□□ -0.9
TNFSF13B-201ENST00000375887 UCNP55089 124 aa9.4□□□□□ -0.9
TNFSF13B-201ENST00000375887 SAMD5Q5TGI4 173 aa9.4□□□□□ -0.9
TNFSF13B-201ENST00000375887 MYOZ3Q8TDC0 251 aa9.4□□□□□ -0.9
TNFSF13B-201ENST00000375887 PHLDA1Q8WV24 401 aaPredicted RBP9.4□□□□□ -0.9
TNFSF13B-201ENST00000375887 CENPEQ02224 2701 aa9.4□□□□□ -0.9
TNFSF13B-201ENST00000375887 A0A087WX48 190 aa9.39□□□□□ -0.91
TNFSF13B-201ENST00000375887 SOCS3O14543 225 aa9.39□□□□□ -0.91
TNFSF13B-201ENST00000375887 SMIM13P0DJ93 91 aa9.39□□□□□ -0.91
TNFSF13B-201ENST00000375887 SRSF1Q07955 248 aaKnown RBP eCLIP9.39□□□□□ -0.91
TNFSF13B-201ENST00000375887 RASL10AQ92737 203 aa9.39□□□□□ -0.91
TNFSF13B-201ENST00000375887 RPL39LQ96EH5 51 aaKnown RBP9.39□□□□□ -0.91
TNFSF13B-201ENST00000375887 ATP6V0BQ99437 205 aa9.39□□□□□ -0.91
TNFSF13B-201ENST00000375887 MOB4Q9Y3A3 225 aa9.39□□□□□ -0.91
TNFSF13B-201ENST00000375887 ZANQ9Y493 2812 aa9.39□□□□□ -0.91
TNFSF13B-201ENST00000375887 C14orf178Q8N769 122 aaPredicted RBP9.39□□□□□ -0.91
TNFSF13B-201ENST00000375887 SMIM2Q9BVW6 85 aa9.39□□□□□ -0.91
TNFSF13B-201ENST00000375887 J3QR89 54 aa9.38□□□□□ -0.91
TNFSF13B-201ENST00000375887 IGHV4-39P01824 125 aa9.38□□□□□ -0.91
TNFSF13B-201ENST00000375887 CD300EQ496F6 205 aaPredicted RBP9.38□□□□□ -0.91
TNFSF13B-201ENST00000375887 C9orf139Q6ZV77 190 aa9.38□□□□□ -0.91
TNFSF13B-201ENST00000375887 MUC4Q99102 2169 aa9.38□□□□□ -0.91
TNFSF13B-201ENST00000375887 FAM223BA6NKX1 122 aa9.38□□□□□ -0.91
TNFSF13B-201ENST00000375887 GNRH2O43555 120 aa9.38□□□□□ -0.91
TNFSF13B-201ENST00000375887 ANXA2RQ3ZCQ2 193 aa9.38□□□□□ -0.91
TNFSF13B-201ENST00000375887 FAM223AQ8IWN6 122 aa9.38□□□□□ -0.91
TNFSF13B-201ENST00000375887 TM2D2Q9BX73 214 aa9.38□□□□□ -0.91
TNFSF13B-201ENST00000375887 NHP2Q9NX24 153 aaKnown RBP9.38□□□□□ -0.91
TNFSF13B-201ENST00000375887 GAGE12HA6NDE8 117 aa9.37□□□□□ -0.91
TNFSF13B-201ENST00000375887 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
TNFSF13B-201ENST00000375887 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
TNFSF13B-201ENST00000375887 Q5PR19 223 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms