RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 LAGE3Q14657 143 aa9.43□□□□□ -0.9
PTCH1-202ENST00000375271 TOR2AQ5JU69 321 aa9.43□□□□□ -0.9
PTCH1-202ENST00000375271 KCNS1Q96KK3 526 aa9.43□□□□□ -0.9
PTCH1-202ENST00000375271 HYLS1Q96M11 299 aa9.43□□□□□ -0.9
PTCH1-202ENST00000375271 TRAV6A0A075B6T7 132 aa9.42□□□□□ -0.9
PTCH1-202ENST00000375271 TRAV8-3A0A0A6YYJ7 113 aa9.42□□□□□ -0.9
PTCH1-202ENST00000375271 GATA1P15976 413 aaPredicted RBP9.42□□□□□ -0.9
PTCH1-202ENST00000375271 LELP1Q5T871 98 aa9.42□□□□□ -0.9
PTCH1-202ENST00000375271 NMES1Q9C002 83 aa9.42□□□□□ -0.9
PTCH1-202ENST00000375271 CIDEAO60543 219 aa9.41□□□□□ -0.9
PTCH1-202ENST00000375271 BTCP35070 178 aa9.41□□□□□ -0.9
PTCH1-202ENST00000375271 TAS2R45P59539 299 aa9.41□□□□□ -0.9
PTCH1-202ENST00000375271 RAB32Q13637 225 aa9.41□□□□□ -0.9
PTCH1-202ENST00000375271 KHDC3LQ587J8 217 aa9.41□□□□□ -0.9
PTCH1-202ENST00000375271 OR5C1Q8NGR4 320 aa9.41□□□□□ -0.9
PTCH1-202ENST00000375271 FXYD5Q96DB9 178 aa9.41□□□□□ -0.9
PTCH1-202ENST00000375271 RMI2Q96E14 147 aa9.41□□□□□ -0.9
PTCH1-202ENST00000375271 FAM167A-AS1Q96KT0 104 aa9.41□□□□□ -0.9
PTCH1-202ENST00000375271 SEC22CQ9BRL7 303 aa9.41□□□□□ -0.9
PTCH1-202ENST00000375271 NDFIP1Q9BT67 221 aa9.41□□□□□ -0.9
PTCH1-202ENST00000375271 RBFOX3A6NFN3 312 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 DIRC3C9JPN6 131 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 LECT2O14960 151 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 GNRH2O43555 120 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 IL7P13232 177 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 ZNF876PQ49A33 203 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 ATP6V0E2Q8NHE4 81 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 ASB13Q8WXK3 278 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 GTSF1LQ9H1H1 148 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 NUDT15Q9NV35 164 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 PLA2G2DQ9UNK4 145 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 COX11Q9Y6N1 276 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 URGCP-MRPS24S4R325 110 aa9.4□□□□□ -0.9
PTCH1-202ENST00000375271 IGHV3-73A0A0B4J1V6 119 aa9.39□□□□□ -0.91
PTCH1-202ENST00000375271 GGTLC3B5MD39 225 aa9.39□□□□□ -0.91
PTCH1-202ENST00000375271 LYRM1O43325 122 aa9.39□□□□□ -0.91
PTCH1-202ENST00000375271 TYMSP04818 313 aa9.39□□□□□ -0.91
PTCH1-202ENST00000375271 SLC25A29Q8N8R3 303 aa9.39□□□□□ -0.91
PTCH1-202ENST00000375271 TMED6Q8WW62 240 aa9.39□□□□□ -0.91
PTCH1-202ENST00000375271 C11orf1Q9H5F2 150 aa9.39□□□□□ -0.91
PTCH1-202ENST00000375271 TREM1Q9NP99 234 aa9.39□□□□□ -0.91
PTCH1-202ENST00000375271 TRBV6-4A0A1B0GX49 114 aa9.38□□□□□ -0.91
PTCH1-202ENST00000375271 F6UZH7 168 aa9.38□□□□□ -0.91
PTCH1-202ENST00000375271 TCRBP04435 133 aa9.38□□□□□ -0.91
PTCH1-202ENST00000375271 SEC11BP0C7V7 166 aa9.38□□□□□ -0.91
PTCH1-202ENST00000375271 ASAH1Q13510 395 aa9.38□□□□□ -0.91
PTCH1-202ENST00000375271 MGST1P10620 155 aaKnown RBP9.37□□□□□ -0.91
PTCH1-202ENST00000375271 NHLH2Q02577 135 aa9.37□□□□□ -0.91
PTCH1-202ENST00000375271 ACOT6Q3I5F7 207 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-202ENST00000375271 Q6ZSA8 131 aa9.37□□□□□ -0.91
PTCH1-202ENST00000375271 GOLT1AQ6ZVE7 132 aa9.37□□□□□ -0.91
PTCH1-202ENST00000375271 WDR61Q9GZS3 305 aaKnown RBP9.37□□□□□ -0.91
PTCH1-202ENST00000375271 OTORQ9NRC9 128 aa9.37□□□□□ -0.91
PTCH1-202ENST00000375271 PGPA6NDG6 321 aa9.36□□□□□ -0.91
PTCH1-202ENST00000375271 RS1O15537 224 aa9.36□□□□□ -0.91
PTCH1-202ENST00000375271 OXTP01178 125 aa9.36□□□□□ -0.91
PTCH1-202ENST00000375271 H2AFB2P0C5Z0 115 aa9.36□□□□□ -0.91
PTCH1-202ENST00000375271 ZFP69Q49AA0 526 aa9.36□□□□□ -0.91
PTCH1-202ENST00000375271 FFAR4Q5NUL3 377 aa9.36□□□□□ -0.91
PTCH1-202ENST00000375271 LCE2DQ5TA82 110 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-202ENST00000375271 KCNIP4Q6PIL6 250 aa9.36□□□□□ -0.91
PTCH1-202ENST00000375271 SCXQ7RTU7 201 aa9.36□□□□□ -0.91
PTCH1-202ENST00000375271 LRRC37A5PQ49AS3 106 aa9.35□□□□□ -0.91
PTCH1-202ENST00000375271 CFAP126Q5VTH2 177 aa9.35□□□□□ -0.91
PTCH1-202ENST00000375271 Q8N976 141 aa9.35□□□□□ -0.91
PTCH1-202ENST00000375271 SCGB1C1Q8TD33 95 aa9.35□□□□□ -0.91
PTCH1-202ENST00000375271 BAALCQ8WXS3 180 aa9.35□□□□□ -0.91
PTCH1-202ENST00000375271 MBD2Q9UBB5 411 aa9.35□□□□□ -0.91
PTCH1-202ENST00000375271 IGKV2D-24A0A075B6R9 120 aa9.34□□□□□ -0.91
PTCH1-202ENST00000375271 A0A087WWC5 75 aa9.34□□□□□ -0.91
PTCH1-202ENST00000375271 A0A1W2PPV4 95 aa9.34□□□□□ -0.91
PTCH1-202ENST00000375271 K7EQM0 130 aa9.34□□□□□ -0.91
PTCH1-202ENST00000375271 WFDC2Q14508 124 aa9.34□□□□□ -0.91
PTCH1-202ENST00000375271 TRAV8-1A0A0A6YYK1 113 aa9.33□□□□□ -0.92
PTCH1-202ENST00000375271 FAM240BA0A1B0GVZ2 78 aa9.33□□□□□ -0.92
PTCH1-202ENST00000375271 GAGE12JA6NER3 117 aa9.33□□□□□ -0.92
PTCH1-202ENST00000375271 GAGE1Q13065 139 aa9.33□□□□□ -0.92
PTCH1-202ENST00000375271 GAGE4Q13068 117 aa9.33□□□□□ -0.92
PTCH1-202ENST00000375271 GAGE5Q13069 117 aa9.33□□□□□ -0.92
PTCH1-202ENST00000375271 LINC01620Q4KN68 170 aa9.33□□□□□ -0.92
PTCH1-202ENST00000375271 GAGE13Q4V321 117 aa9.33□□□□□ -0.92
PTCH1-202ENST00000375271 SDHCQ99643 169 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-202ENST00000375271 CHAC1Q9BUX1 264 aa9.33□□□□□ -0.92
PTCH1-202ENST00000375271 TAAR5O14804 337 aa9.32□□□□□ -0.92
PTCH1-202ENST00000375271 S100A4P26447 101 aaKnown RBP9.32□□□□□ -0.92
PTCH1-202ENST00000375271 PQLC2Q6ZP29 291 aa9.32□□□□□ -0.92
PTCH1-202ENST00000375271 DAZ4Q86SG3 579 aaKnown RBP9.32□□□□□ -0.92
PTCH1-202ENST00000375271 DAZ3Q9NR90 486 aaKnown RBP9.32□□□□□ -0.92
PTCH1-202ENST00000375271 SERTM2A0A1B0GWG4 89 aa9.31□□□□□ -0.92
PTCH1-202ENST00000375271 PLA2G10O15496 165 aa9.31□□□□□ -0.92
PTCH1-202ENST00000375271 FGF8P55075 233 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-202ENST00000375271 CYCSP99999 105 aaKnown RBP9.31□□□□□ -0.92
PTCH1-202ENST00000375271 ZNF506Q5JVG8 444 aa9.31□□□□□ -0.92
PTCH1-202ENST00000375271 MZT2BQ6NZ67 158 aa9.31□□□□□ -0.92
PTCH1-202ENST00000375271 A0A087WX48 190 aa9.3□□□□□ -0.92
PTCH1-202ENST00000375271 GCGP01275 180 aa9.3□□□□□ -0.92
PTCH1-202ENST00000375271 PET100P0DJ07 73 aa9.3□□□□□ -0.92
PTCH1-202ENST00000375271 GNG5P63218 68 aa9.3□□□□□ -0.92
PTCH1-202ENST00000375271 IL15RAQ13261 267 aa9.3□□□□□ -0.92
PTCH1-202ENST00000375271 ELOBQ15370 118 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms