RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 SMIM27A0A1W2PRY6 76 aa8.02□□□□□ -1.13
HLA-DQA1-202ENST00000374949 TMEM189A5PLL7 270 aa8.02□□□□□ -1.13
HLA-DQA1-202ENST00000374949 IGKV3-20P01619 116 aa8.02□□□□□ -1.13
HLA-DQA1-202ENST00000374949 RNASE4P34096 147 aaKnown RBP8.02□□□□□ -1.13
HLA-DQA1-202ENST00000374949 FAM3BP58499 235 aaPredicted RBP8.02□□□□□ -1.13
HLA-DQA1-202ENST00000374949 ODF3L2Q3SX64 289 aa8.02□□□□□ -1.13
HLA-DQA1-202ENST00000374949 ZFAND2AQ8N6M9 145 aa8.02□□□□□ -1.13
HLA-DQA1-202ENST00000374949 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.02□□□□□ -1.13
HLA-DQA1-202ENST00000374949 OR2D3Q8NGH3 330 aa8.02□□□□□ -1.13
HLA-DQA1-202ENST00000374949 TSKUQ8WUA8 353 aa8.02□□□□□ -1.13
HLA-DQA1-202ENST00000374949 BTF3L4Q96K17 158 aa8.02□□□□□ -1.13
HLA-DQA1-202ENST00000374949 YPEL4Q96NS1 127 aa8.02□□□□□ -1.13
HLA-DQA1-202ENST00000374949 TRAV9-1A0A075B6T8 112 aa8.01□□□□□ -1.13
HLA-DQA1-202ENST00000374949 TGIF2-C20orf24A0A0A6YYL0 155 aa8.01□□□□□ -1.13
HLA-DQA1-202ENST00000374949 XKRY2A2RUG3 117 aa8.01□□□□□ -1.13
HLA-DQA1-202ENST00000374949 A8MTW9 85 aa8.01□□□□□ -1.13
HLA-DQA1-202ENST00000374949 J3KRW8 73 aa8.01□□□□□ -1.13
HLA-DQA1-202ENST00000374949 ORM1P02763 201 aa8.01□□□□□ -1.13
HLA-DQA1-202ENST00000374949 RPS20P60866 119 aaKnown RBP8.01□□□□□ -1.13
HLA-DQA1-202ENST00000374949 ZNF124Q15973 351 aa8.01□□□□□ -1.13
HLA-DQA1-202ENST00000374949 LINC00476Q8WZB0 136 aa8.01□□□□□ -1.13
HLA-DQA1-202ENST00000374949 CLUHP3Q96NS8 147 aa8.01□□□□□ -1.13
HLA-DQA1-202ENST00000374949 TRBV24-1A0A075B6N3 115 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 TRAV21A0A0B4J279 112 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 FAM231BA6NCW3 169 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 RBMY1BA6NDE4 496 aaKnown RBP8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 RBMY1EA6NEQ0 496 aaKnown RBP8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 KLLNB2CW77 178 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 CA1P00915 261 aaPredicted RBP8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 CD7P09564 240 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 RBMY1DP0C7P1 496 aaKnown RBP8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 CDKN1BP46527 198 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 RPL19P84098 196 aaKnown RBP8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 PRR9Q5T870 116 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 Q6AWC8 147 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 AMTNQ6UX39 209 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 STHQ8IWL8 128 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 DEFB125Q8N687 156 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 FAM210BQ96KR6 192 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 PYGO2Q9BRQ0 406 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 GFRA4Q9GZZ7 299 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 SRD5A3Q9H8P0 318 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 NAT8BQ9UHF3 227 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 FRAS1Q86XX4 4008 aa8□□□□□ -1.13
HLA-DQA1-202ENST00000374949 HERC2O95714 4834 aa7.99□□□□□ -1.13
HLA-DQA1-202ENST00000374949 A0A1W2PPQ1 181 aa7.99□□□□□ -1.13
HLA-DQA1-202ENST00000374949 C7orf71A4D174 169 aa7.99□□□□□ -1.13
HLA-DQA1-202ENST00000374949 LY6G6CO95867 125 aa7.99□□□□□ -1.13
HLA-DQA1-202ENST00000374949 CXCL1P09341 107 aa7.99□□□□□ -1.13
HLA-DQA1-202ENST00000374949 FOXA3P55318 350 aaPredicted RBP7.99□□□□□ -1.13
HLA-DQA1-202ENST00000374949 TCL1AP56279 114 aa7.99□□□□□ -1.13
HLA-DQA1-202ENST00000374949 LINC01559Q495D7 138 aa7.99□□□□□ -1.13
HLA-DQA1-202ENST00000374949 TMSB15BA0A087X1C1 80 aa7.98□□□□□ -1.13
HLA-DQA1-202ENST00000374949 M0R2Z0 102 aa7.98□□□□□ -1.13
HLA-DQA1-202ENST00000374949 GZMBP10144 247 aa7.98□□□□□ -1.13
HLA-DQA1-202ENST00000374949 RAB5AP20339 215 aa7.98□□□□□ -1.13
HLA-DQA1-202ENST00000374949 KIR3DS1Q14943 382 aa7.98□□□□□ -1.13
HLA-DQA1-202ENST00000374949 SPINK13Q1W4C9 94 aa7.98□□□□□ -1.13
HLA-DQA1-202ENST00000374949 NUP35Q8NFH5 326 aa7.98□□□□□ -1.13
HLA-DQA1-202ENST00000374949 NEU1Q99519 415 aa7.98□□□□□ -1.13
HLA-DQA1-202ENST00000374949 TRAV12-2A0A075B6T6 113 aa7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 TRAV12-3A0A0B4J271 114 aa7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 IGKV3D-20A0A0C4DH25 116 aa7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 HIGD1CA8MV81 97 aa7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 ZNF324O75467 553 aaPredicted RBP7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 AMBPP02760 352 aa7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 FXYD7P58549 80 aa7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 NUTF2P61970 127 aaKnown RBP7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 GFI1BQ5VTD9 330 aa7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 Q6ZQT7 251 aa7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 TRPT1Q86TN4 253 aaKnown RBP7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 GTSF1Q8WW33 167 aa7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 PGLYRP4Q96LB8 373 aa7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 C11orf21Q9P2W6 132 aa7.97□□□□□ -1.13
HLA-DQA1-202ENST00000374949 GRIFINA4D1Z8 144 aa7.96□□□□□ -1.14
HLA-DQA1-202ENST00000374949 SPINK4O60575 86 aa7.96□□□□□ -1.14
HLA-DQA1-202ENST00000374949 TYMSP04818 313 aa7.96□□□□□ -1.14
HLA-DQA1-202ENST00000374949 RPS10P46783 165 aaKnown RBP7.96□□□□□ -1.14
HLA-DQA1-202ENST00000374949 FAM159AQ6UWV7 190 aa7.96□□□□□ -1.14
HLA-DQA1-202ENST00000374949 ZNF575Q86XF7 245 aa7.96□□□□□ -1.14
HLA-DQA1-202ENST00000374949 KCNS1Q96KK3 526 aa7.96□□□□□ -1.14
HLA-DQA1-202ENST00000374949 NAGKQ9UJ70 344 aa7.96□□□□□ -1.14
HLA-DQA1-202ENST00000374949 PCLOQ9Y6V0 5065 aa7.96□□□□□ -1.14
HLA-DQA1-202ENST00000374949 CRXO43186 299 aaPredicted RBP7.95□□□□□ -1.14
HLA-DQA1-202ENST00000374949 ANXA2RQ3ZCQ2 193 aa7.95□□□□□ -1.14
HLA-DQA1-202ENST00000374949 COX19Q49B96 90 aa7.95□□□□□ -1.14
HLA-DQA1-202ENST00000374949 MUC21Q5SSG8 566 aa7.95□□□□□ -1.14
HLA-DQA1-202ENST00000374949 MORN3Q6PF18 240 aaPredicted RBP7.95□□□□□ -1.14
HLA-DQA1-202ENST00000374949 LYZL1Q6UWQ5 148 aa7.95□□□□□ -1.14
HLA-DQA1-202ENST00000374949 FER1L6-AS1Q8NA97 138 aa7.95□□□□□ -1.14
HLA-DQA1-202ENST00000374949 BORCS7Q96B45 105 aa7.95□□□□□ -1.14
HLA-DQA1-202ENST00000374949 C20orf144Q9BQM9 153 aa7.95□□□□□ -1.14
HLA-DQA1-202ENST00000374949 IGHV1OR15-1A0A075B7D0 117 aa7.94□□□□□ -1.14
HLA-DQA1-202ENST00000374949 A0A1B0GUT8 65 aa7.94□□□□□ -1.14
HLA-DQA1-202ENST00000374949 F2Z2F3 143 aa7.94□□□□□ -1.14
HLA-DQA1-202ENST00000374949 IGLC6P0CF74 106 aa7.94□□□□□ -1.14
HLA-DQA1-202ENST00000374949 RIGQ13278 110 aa7.94□□□□□ -1.14
HLA-DQA1-202ENST00000374949 DNLZQ5SXM8 178 aa7.94□□□□□ -1.14
HLA-DQA1-202ENST00000374949 MRPL54Q6P161 138 aaKnown RBP7.94□□□□□ -1.14
HLA-DQA1-202ENST00000374949 RASL11AQ6T310 242 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms