RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 NRACQ8N912 160 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 LY6G5BQ8NDX9 201 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 PSMG3-AS1Q96PY0 264 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.51□□□□□ -1.05
CCDC40-203ENST00000374877 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 DCHS2Q6V1P9 2916 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 J3KRW8 73 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 CLEC3BP05452 202 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 PLNP26678 52 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 GAGE13Q4V321 117 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 CCL19Q99731 98 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 SPAG8Q99932 426 aaPredicted RBP8.51□□□□□ -1.05
CCDC40-203ENST00000374877 ZNF462Q96JM2 2506 aa8.51□□□□□ -1.05
CCDC40-203ENST00000374877 OR11H12B2RN74 326 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 BUB3O43684 328 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 HLA-DRB4P13762 266 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 TAL2Q16559 108 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 OR11H1Q8NG94 326 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 OR11H2Q8NH07 326 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 CYSLTR1Q9Y271 337 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 HLA-DRB4X5D2U9 266 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 SPTBN1Q01082 2364 aaKnown RBP8.5□□□□□ -1.05
CCDC40-203ENST00000374877 ZFYVE26Q68DK2 2539 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 H3BVH4 76 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 SCGB2A2Q13296 93 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 IGHV7-81A0A0B4J1V7 117 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 RRN3P1Q2M238 152 aa8.5□□□□□ -1.05
CCDC40-203ENST00000374877 IGHV7-4-1A0A0J9YVY3 117 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 SPRY2O43597 315 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 PRTN3P24158 256 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 CCDC144NLQ6NUI1 221 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 VMO1Q7Z5L0 202 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 SLC50A1Q9BRV3 221 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 ODF3BA8MYP8 253 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 F8VRH5 84 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 INSL3P51460 131 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 CLEC19AQ6UXS0 136 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 SCGB3A1Q96QR1 104 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 A0A1B0GWB2 263 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 RBAKDNA6NC62 111 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 H7C1H1 209 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 HIF1ANQ9NWT6 349 aa8.49□□□□□ -1.05
CCDC40-203ENST00000374877 MYMXA0A1B0GTQ4 84 aa8.48□□□□□ -1.05
CCDC40-203ENST00000374877 SFTA2Q6UW10 78 aa8.48□□□□□ -1.05
CCDC40-203ENST00000374877 ZFAND3Q9H8U3 227 aa8.48□□□□□ -1.05
CCDC40-203ENST00000374877 UBR5O95071 2799 aaPredicted RBP8.48□□□□□ -1.05
CCDC40-203ENST00000374877 TRBV7-3A0A075B6L6 115 aa8.48□□□□□ -1.05
CCDC40-203ENST00000374877 M0R381 172 aa8.48□□□□□ -1.05
CCDC40-203ENST00000374877 IGHV4-39P01824 125 aa8.48□□□□□ -1.05
CCDC40-203ENST00000374877 SMIM2Q9BVW6 85 aa8.48□□□□□ -1.05
CCDC40-203ENST00000374877 NDUFS8O00217 210 aa8.47□□□□□ -1.05
CCDC40-203ENST00000374877 SCGB1A1P11684 91 aa8.47□□□□□ -1.05
CCDC40-203ENST00000374877 RAB9AP51151 201 aa8.47□□□□□ -1.05
CCDC40-203ENST00000374877 ZNF502Q8TBZ5 544 aa8.47□□□□□ -1.05
CCDC40-203ENST00000374877 M0R1W7 72 aa8.47□□□□□ -1.05
CCDC40-203ENST00000374877 ATP5G2Q06055 141 aa8.47□□□□□ -1.05
CCDC40-203ENST00000374877 PGPEP1Q9NXJ5 209 aa8.47□□□□□ -1.05
CCDC40-203ENST00000374877 RELNP78509 3460 aa8.47□□□□□ -1.05
CCDC40-203ENST00000374877 C8orf86Q6ZUL3 223 aa8.47□□□□□ -1.05
CCDC40-203ENST00000374877 MRPL16Q9NX20 251 aaKnown RBP8.47□□□□□ -1.05
CCDC40-203ENST00000374877 TRAV8-2A0A0B4J237 113 aa8.46□□□□□ -1.05
CCDC40-203ENST00000374877 HOXA3O43365 443 aaPredicted RBP8.46□□□□□ -1.05
CCDC40-203ENST00000374877 SCGB1D4Q6XE38 83 aa8.46□□□□□ -1.05
CCDC40-203ENST00000374877 A0A1B0GV72 72 aa8.46□□□□□ -1.06
CCDC40-203ENST00000374877 Q8N6K4 173 aa8.46□□□□□ -1.06
CCDC40-203ENST00000374877 Q8N9W7 124 aa8.46□□□□□ -1.06
CCDC40-203ENST00000374877 SPATA25Q9BR10 227 aa8.46□□□□□ -1.06
CCDC40-203ENST00000374877 CLPSL1A2RUU4 121 aa8.46□□□□□ -1.06
CCDC40-203ENST00000374877 ATP6V0E1O15342 81 aa8.46□□□□□ -1.06
CCDC40-203ENST00000374877 APOMO95445 188 aa8.46□□□□□ -1.06
CCDC40-203ENST00000374877 METTL26Q96S19 204 aa8.46□□□□□ -1.06
CCDC40-203ENST00000374877 PRO0461Q9UI25 63 aa8.46□□□□□ -1.06
CCDC40-203ENST00000374877 SVEP1Q4LDE5 3571 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 PRSS47A8MTI9 375 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 G3V318 75 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 S100A4P26447 101 aaKnown RBP8.45□□□□□ -1.06
CCDC40-203ENST00000374877 DSCR9P59020 149 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 C16orf92Q96LL3 132 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 ATP6V0BQ99437 205 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 PRADC1Q9BSG0 188 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 TRAV12-1A0A0B4J245 112 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 MGPP08493 103 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 LGALS1P09382 135 aaKnown RBP8.45□□□□□ -1.06
CCDC40-203ENST00000374877 SUMO2P61956 95 aaKnown RBP8.45□□□□□ -1.06
CCDC40-203ENST00000374877 SRSF9Q13242 221 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCDC40-203ENST00000374877 ORMDL2Q53FV1 153 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 PRR9Q5T870 116 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 FAM110DQ8TAY7 271 aaPredicted RBP8.45□□□□□ -1.06
CCDC40-203ENST00000374877 RPL39LQ96EH5 51 aaKnown RBP8.45□□□□□ -1.06
CCDC40-203ENST00000374877 MRAP2Q96G30 205 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 PIMREGQ9BSJ6 248 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 LOC107984156A0A0G2JMH3 177 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 IGF1P05019 195 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 MORN3Q6PF18 240 aaPredicted RBP8.45□□□□□ -1.06
CCDC40-203ENST00000374877 ARL17AQ8IVW1 177 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 CCDC140Q96MF4 163 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 C20orf78Q9BR46 151 aa8.45□□□□□ -1.06
CCDC40-203ENST00000374877 USP9XQ93008 2570 aaPredicted RBP8.44□□□□□ -1.06
CCDC40-203ENST00000374877 C14orf178Q8N769 122 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms