RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ZNF833PQ6ZTB9 187 aa9.78□□□□□ -0.84
NPLOC4-202ENST00000374747 SYNJ2BPP57105 145 aa9.78□□□□□ -0.84
NPLOC4-202ENST00000374747 RPL32P62910 135 aaKnown RBP9.78□□□□□ -0.84
NPLOC4-202ENST00000374747 DKK4Q9UBT3 224 aa9.78□□□□□ -0.84
NPLOC4-202ENST00000374747 UBE2DNLQ8IWF7 75 aa9.77□□□□□ -0.84
NPLOC4-202ENST00000374747 MED12LQ86YW9 2145 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 DOPEY2Q9Y3R5 2298 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 TRAV26-2A0A0B4J265 109 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 NPYP01303 97 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 Q8NFD4 153 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 SMIM2Q9BVW6 85 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 ATP6V0E1O15342 81 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 TRACP01848 142 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 VWC2Q2TAL6 325 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 KRTAP27-1Q3LI81 207 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 ABCA4P78363 2273 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 H3BRN7 92 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 AZU1P20160 251 aa9.77□□□□□ -0.85
NPLOC4-202ENST00000374747 TRBV25-1A0A075B6N4 114 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 DEFB130BP0DP73 79 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 DEFB130AP0DP74 79 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 HLA-DMBP28068 263 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 PFN2P35080 140 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 CARD19Q96LW7 228 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 K7ERJ3 54 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 LINC01356Q8N9X3 169 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 ANKRD11Q6UB99 2663 aaPredicted RBP9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 GAGE12JA6NER3 117 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 GAGE4Q13068 117 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 GAGE5Q13069 117 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 SPINK13Q1W4C9 94 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 Q6ZSR3 168 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 HAMPP81172 84 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 C8orf86Q6ZUL3 223 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 ZGRF1Q86YA3 2104 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 CUL9Q8IWT3 2517 aa9.76□□□□□ -0.85
NPLOC4-202ENST00000374747 GATA3P23771 443 aa9.75□□□□□ -0.85
NPLOC4-202ENST00000374747 TLN1Q9Y490 2541 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-202ENST00000374747 IGHV1OR15-1A0A075B7D0 117 aa9.75□□□□□ -0.85
NPLOC4-202ENST00000374747 CRIP3Q6Q6R5 217 aa9.75□□□□□ -0.85
NPLOC4-202ENST00000374747 ZC2HC1AQ96GY0 325 aa9.75□□□□□ -0.85
NPLOC4-202ENST00000374747 HAPLN4Q86UW8 402 aa9.75□□□□□ -0.85
NPLOC4-202ENST00000374747 LOXP28300 417 aaPredicted RBP9.75□□□□□ -0.85
NPLOC4-202ENST00000374747 PYGO2Q9BRQ0 406 aa9.75□□□□□ -0.85
NPLOC4-202ENST00000374747 KLK9Q9UKQ9 250 aa9.75□□□□□ -0.85
NPLOC4-202ENST00000374747 J3QQQ9 107 aa9.75□□□□□ -0.85
NPLOC4-202ENST00000374747 ANXA2RQ3ZCQ2 193 aa9.75□□□□□ -0.85
NPLOC4-202ENST00000374747 MAP1AP78559 2803 aaPredicted RBP9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 UBE2E1P51965 193 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 C17orf58Q2M2W7 97 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 PLA2G2EQ9NZK7 142 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 PSCAO43653 123 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 SUMO4Q6EEV6 95 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 LINC00311Q8N616 119 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 IGLC7A0M8Q6 106 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 NDUFS7O75251 213 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 C12orf74Q32Q52 190 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 BOD1L2Q8IYS8 172 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 FXYD5Q96DB9 178 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 KAAG1Q9UBP8 84 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 KALRNO60229 2985 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 WT1-ASQ06250 92 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 AMTNQ6UX39 209 aa9.74□□□□□ -0.85
NPLOC4-202ENST00000374747 TRAV13-2A0A0B4J235 113 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 ANKRD29Q8N6D5 301 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 C20orf78Q9BR46 151 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 TNCP24821 2201 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 IGHV3-16A0A0C4DH30 117 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 ZNF561-AS1K7EIQ3 104 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 MSMBP08118 114 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 SHISA9B4DS77 424 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 C15orf65H3BRN8 121 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 CRLF1O75462 422 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 GAGE7O76087 117 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 GAGE12FP0CL80 117 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 GAGE12GP0CL81 117 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 GAGE12IP0CL82 117 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 XCL2Q9UBD3 114 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 KIR2DL5BA0A0G2JN68 375 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 KIR2DL5BA0A0G2JPC4 375 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 KIR2DL5AQ8N109 375 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 THAP8Q8NA92 274 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 LYPD6BQ8NI32 183 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 TMEM126AQ9H061 195 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 DKK2Q9UBU2 259 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 COL4A2P08572 1712 aa9.73□□□□□ -0.85
NPLOC4-202ENST00000374747 TMEM243Q9BU79 118 aa9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 WIPF2Q8TF74 440 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 SPANXCQ9NY87 97 aa9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 CDKN1BP46527 198 aa9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 KLF5Q13887 457 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 DUX4L9Q6RFH8 374 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 NTN5Q8WTR8 489 aaPredicted RBP9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 K7EN84 100 aa9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 IGHG4P01861 327 aa9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 ZNF747Q9BV97 191 aa9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 WNK2Q9Y3S1 2297 aa9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 LTAP01374 205 aa9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 IL15RAQ13261 267 aa9.72□□□□□ -0.85
NPLOC4-202ENST00000374747 C15orf53Q8NAA6 179 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 275.5 ms