RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 ETDBQ3ZM63 59 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 ZNF407Q9C0G0 2248 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 DEFB130BP0DP73 79 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 DEFB130AP0DP74 79 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 FOXG1P55316 489 aaPredicted RBP5.03□□□□□ -1.6
PTPN3-202ENST00000374541 HGFACQ04756 655 aa5.03□□□□□ -1.6
PTPN3-202ENST00000374541 NTF4P34130 210 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 KLF5Q13887 457 aaPredicted RBP5.02□□□□□ -1.61
PTPN3-202ENST00000374541 CEND1Q8N111 149 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 ZNF837Q96EG3 531 aaPredicted RBP5.02□□□□□ -1.61
PTPN3-202ENST00000374541 F8VRH5 84 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 ATOX1O00244 68 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 PRB2P02812 416 aaPredicted RBP5.02□□□□□ -1.61
PTPN3-202ENST00000374541 TMEM200BQ69YZ2 307 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 LYPD2Q6UXB3 125 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 C8orf86Q6ZUL3 223 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 TMEM243Q9BU79 118 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 PRRC2CQ9Y520 2896 aaKnown RBP5.02□□□□□ -1.61
PTPN3-202ENST00000374541 IGLL5B9A064 214 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 BUB1B-PAK6H3BSN5 160 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 EGR2P11161 476 aaPredicted RBP5.02□□□□□ -1.61
PTPN3-202ENST00000374541 NBEAQ8NFP9 2946 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 CCDC88CQ9P219 2028 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 IGF2RP11717 2491 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 SHISA9B4DS77 424 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 J3KT08 172 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 CCL18P55774 89 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 Q8TAT8 98 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 KALRNO60229 2985 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 HERV-K104P63124 156 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 SPATA25Q9BR10 227 aa5.02□□□□□ -1.61
PTPN3-202ENST00000374541 NPYP01303 97 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 C10orf55Q5SWW7 151 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 THAP8Q8NA92 274 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 PIFOQ8TCI5 191 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 SCRT2Q9NQ03 307 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 IGHV3-73A0A0B4J1V6 119 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 IGHV4-38-2P0DP08 117 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 GAS1P54826 345 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 ORMDL1Q9P0S3 153 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 NUP210Q8TEM1 1887 aaPredicted RBP5.01□□□□□ -1.61
PTPN3-202ENST00000374541 CDKN1BP46527 198 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 MP68P56378 58 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 RHOHQ15669 191 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 NDUFA11Q86Y39 141 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 SMIM2Q9BVW6 85 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 RELNP78509 3460 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 IGHV1OR15-1A0A075B7D0 117 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 SDHAF1A6NFY7 115 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 KNCNA6PVL3 124 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 PRSS47A8MTI9 375 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 IGHV2-70P01814 119 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 FOXL2NBQ6ZUU3 175 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 C2orf16Q68DN1 1984 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 NYNRINQ9P2P1 1898 aaKnown RBP5.01□□□□□ -1.61
PTPN3-202ENST00000374541 SMIM27A0A1W2PRY6 76 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 F6UB75 175 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 GAFA1Q96PS6 74 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 TRBV19A0A075B6N1 114 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 H0YGX0 51 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 FUSP35637 526 aaKnown RBP eCLIP5.01□□□□□ -1.61
PTPN3-202ENST00000374541 GTF3C1Q12789 2109 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 Q6ZVH6 145 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 CD177Q8N6Q3 437 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 PSMG3-AS1Q96PY0 264 aa5.01□□□□□ -1.61
PTPN3-202ENST00000374541 A0A087WWL8 130 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 J3QQQ9 107 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 QRFPP83859 136 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 Q6P435 159 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 C11orf52Q96A22 123 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 PRR25Q96S07 402 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 MYCNOSP40205 109 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 KIF26AQ9ULI4 1882 aaPredicted RBP5□□□□□ -1.61
PTPN3-202ENST00000374541 MGAQ8IWI9 3026 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 CFC1BP0CG36 223 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 CFC1P0CG37 223 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 IGLL1P15814 213 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 ADCYAP1P18509 176 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 MORN5Q5VZ52 161 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 ANKRD36A6QL64 1941 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 TP53BP1Q12888 1972 aaPredicted RBP5□□□□□ -1.61
PTPN3-202ENST00000374541 TRAV25A0A0B4J276 109 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 SMKR1H3BMG3 65 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 IGHV3-53P01767 116 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 ELANEP08246 267 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 KRTAP10-9P60411 292 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 ZNF493Q6ZR52 646 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 WIPF2Q8TF74 440 aaPredicted RBP5□□□□□ -1.61
PTPN3-202ENST00000374541 VOPP1Q96AW1 172 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 AZU1P20160 251 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 CRYBA4P53673 196 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 C10orf91Q5T1B1 145 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 ABCA2Q9BZC7 2435 aa5□□□□□ -1.61
PTPN3-202ENST00000374541 COL4A3Q01955 1670 aa4.99□□□□□ -1.61
PTPN3-202ENST00000374541 FXYD7P58549 80 aa4.99□□□□□ -1.61
PTPN3-202ENST00000374541 HILS1P60008 231 aa4.99□□□□□ -1.61
PTPN3-202ENST00000374541 PRRC2AP48634 2157 aaKnown RBP4.99□□□□□ -1.61
PTPN3-202ENST00000374541 HIVEP3Q5T1R4 2406 aa4.99□□□□□ -1.61
PTPN3-202ENST00000374541 IGKV1-27A0A075B6S5 117 aa4.99□□□□□ -1.61
PTPN3-202ENST00000374541 IGFBPL1Q8WX77 278 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms