RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 TMEM191AQ9H0A3 160 aa9.2□□□□□ -0.94
HMGCL-202ENST00000374487 MSRB1Q9NZV6 116 aa9.2□□□□□ -0.94
HMGCL-202ENST00000374487 IGKV3D-20A0A0C4DH25 116 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 OR4C46A6NHA9 309 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 Q6ZN92 141 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 SPATA12Q7Z6I5 190 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 MRPL52Q86TS9 123 aaKnown RBP9.19□□□□□ -0.94
HMGCL-202ENST00000374487 DUX5Q96PT3 197 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 CNFNQ9BYD5 112 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 SIGLEC8Q9NYZ4 499 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 IGKV3-7A0A075B6H7 116 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 TMEM95Q3KNT9 176 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 TM4SF20Q53R12 229 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 C20orf173Q96LM9 149 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 RHPN1-AS1Q9BWJ2 59 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 DAZ1Q9NQZ3 744 aaKnown RBP9.19□□□□□ -0.94
HMGCL-202ENST00000374487 PPP1R14DQ9NXH3 145 aa9.19□□□□□ -0.94
HMGCL-202ENST00000374487 PEF1Q9UBV8 284 aaKnown RBP9.19□□□□□ -0.94
HMGCL-202ENST00000374487 SMKR1H3BMG3 65 aa9.18□□□□□ -0.94
HMGCL-202ENST00000374487 OVOL1O14753 267 aa9.18□□□□□ -0.94
HMGCL-202ENST00000374487 CFHR3Q02985 330 aa9.18□□□□□ -0.94
HMGCL-202ENST00000374487 FAM106AQ4KMX7 169 aa9.18□□□□□ -0.94
HMGCL-202ENST00000374487 PET117Q6UWS5 81 aa9.18□□□□□ -0.94
HMGCL-202ENST00000374487 LINC00477Q96M19 166 aa9.18□□□□□ -0.94
HMGCL-202ENST00000374487 C11orf21Q9P2W6 132 aa9.18□□□□□ -0.94
HMGCL-202ENST00000374487 IGHV7-4-1A0A0J9YVY3 117 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 HNRNPA3P51991 378 aaKnown RBP9.17□□□□□ -0.94
HMGCL-202ENST00000374487 FOXE3Q13461 319 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 BATFQ16520 125 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 GPHB5Q86YW7 130 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 ESM1Q9NQ30 184 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 LENEPQ9Y5L5 61 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 J3KRW8 73 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 NCR2O95944 276 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 PPBPP02775 128 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 IGLL1P15814 213 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 SMIM15Q7Z3B0 74 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 ZNF580Q9UK33 172 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 DNHD1Q96M86 4753 aa9.17□□□□□ -0.94
HMGCL-202ENST00000374487 HSBP1L1C9JCN9 74 aa9.16□□□□□ -0.94
HMGCL-202ENST00000374487 NPYP01303 97 aa9.16□□□□□ -0.94
HMGCL-202ENST00000374487 NUTF2P61970 127 aaKnown RBP9.16□□□□□ -0.94
HMGCL-202ENST00000374487 LINC00469Q8N7U9 141 aa9.16□□□□□ -0.94
HMGCL-202ENST00000374487 ZNF747Q9BV97 191 aa9.16□□□□□ -0.94
HMGCL-202ENST00000374487 ATRQ13535 2644 aa9.16□□□□□ -0.94
HMGCL-202ENST00000374487 SOCS3O14543 225 aa9.16□□□□□ -0.94
HMGCL-202ENST00000374487 TCF21O43680 179 aa9.16□□□□□ -0.94
HMGCL-202ENST00000374487 PSMB8P28062 276 aa9.16□□□□□ -0.94
HMGCL-202ENST00000374487 KRTAP24-1Q3LI83 254 aa9.16□□□□□ -0.94
HMGCL-202ENST00000374487 MCRIP2Q9BUT9 160 aaKnown RBP9.16□□□□□ -0.94
HMGCL-202ENST00000374487 SMPXQ9UHP9 88 aa9.16□□□□□ -0.94
HMGCL-202ENST00000374487 SPANXN1Q5VSR9 72 aa9.15□□□□□ -0.94
HMGCL-202ENST00000374487 Q6ZQT7 251 aa9.15□□□□□ -0.94
HMGCL-202ENST00000374487 RNF185Q96GF1 192 aa9.15□□□□□ -0.94
HMGCL-202ENST00000374487 MAP1LC3AQ9H492 121 aa9.15□□□□□ -0.94
HMGCL-202ENST00000374487 SELENOKQ9Y6D0 94 aa9.15□□□□□ -0.94
HMGCL-202ENST00000374487 K7EMT4 169 aa9.14□□□□□ -0.95
HMGCL-202ENST00000374487 hDV102S1A0JD36 115 aa9.14□□□□□ -0.95
HMGCL-202ENST00000374487 RPLP1P05386 114 aaKnown RBP9.14□□□□□ -0.95
HMGCL-202ENST00000374487 EVI2AP22794 236 aa9.14□□□□□ -0.95
HMGCL-202ENST00000374487 DEFB1P60022 68 aa9.14□□□□□ -0.95
HMGCL-202ENST00000374487 PRR9Q5T870 116 aa9.14□□□□□ -0.95
HMGCL-202ENST00000374487 OR8A1Q8NGG7 326 aa9.14□□□□□ -0.95
HMGCL-202ENST00000374487 ST20Q9HBF5 79 aa9.14□□□□□ -0.95
HMGCL-202ENST00000374487 VPREB3Q9UKI3 123 aa9.14□□□□□ -0.95
HMGCL-202ENST00000374487 LAMTOR2Q9Y2Q5 125 aa9.14□□□□□ -0.95
HMGCL-202ENST00000374487 UFC1Q9Y3C8 167 aa9.14□□□□□ -0.95
HMGCL-202ENST00000374487 TRAV21A0A0B4J279 112 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 HBDP02042 147 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 TSPOP30536 169 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 FXYD7P58549 80 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 C10orf99Q6UWK7 81 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 PMCHL2Q9BQD1 86 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 TMEM89A2RUT3 159 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 F6UB75 175 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 TNFRSF6BO95407 300 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 RNASE4P34096 147 aaKnown RBP9.13□□□□□ -0.95
HMGCL-202ENST00000374487 ID1P41134 155 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 CACNG7P62955 275 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 LINC01545Q5VT33 79 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 ZFAND2AQ8N6M9 145 aa9.13□□□□□ -0.95
HMGCL-202ENST00000374487 A0A096LNJ9 63 aa9.12□□□□□ -0.95
HMGCL-202ENST00000374487 H3BVH4 76 aa9.12□□□□□ -0.95
HMGCL-202ENST00000374487 TCAPO15273 167 aa9.12□□□□□ -0.95
HMGCL-202ENST00000374487 S100A4P26447 101 aaKnown RBP9.12□□□□□ -0.95
HMGCL-202ENST00000374487 WFDC3Q8IUB2 231 aa9.12□□□□□ -0.95
HMGCL-202ENST00000374487 GAS8-AS1O95177 125 aa9.12□□□□□ -0.95
HMGCL-202ENST00000374487 EDN2P20800 178 aa9.12□□□□□ -0.95
HMGCL-202ENST00000374487 SAMD13Q5VXD3 122 aa9.12□□□□□ -0.95
HMGCL-202ENST00000374487 Q6YL49 198 aa9.12□□□□□ -0.95
HMGCL-202ENST00000374487 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.12□□□□□ -0.95
HMGCL-202ENST00000374487 NXT2Q9NPJ8 142 aaKnown RBP9.12□□□□□ -0.95
HMGCL-202ENST00000374487 MRPS16Q9Y3D3 137 aaKnown RBP9.12□□□□□ -0.95
HMGCL-202ENST00000374487 SNAI2O43623 268 aa9.11□□□□□ -0.95
HMGCL-202ENST00000374487 COL5A1-AS1Q5SY13 56 aa9.11□□□□□ -0.95
HMGCL-202ENST00000374487 HOXA3O43365 443 aaPredicted RBP9.1□□□□□ -0.95
HMGCL-202ENST00000374487 GATA1P15976 413 aaPredicted RBP9.1□□□□□ -0.95
HMGCL-202ENST00000374487 ASIPP42127 132 aa9.1□□□□□ -0.95
HMGCL-202ENST00000374487 HILS1P60008 231 aa9.1□□□□□ -0.95
HMGCL-202ENST00000374487 COL6A5A8TX70 2615 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms