RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 INTS1Q8N201 2190 aaKnown RBP9.98□□□□□ -0.81
PRPF4-201ENST00000374198 IGHV3-72A0A0B4J1Y9 119 aa9.98□□□□□ -0.81
PRPF4-201ENST00000374198 TEX22C9J3V5 150 aa9.98□□□□□ -0.81
PRPF4-201ENST00000374198 C9JAW5 83 aa9.98□□□□□ -0.81
PRPF4-201ENST00000374198 C10orf126Q8N4M7 172 aa9.98□□□□□ -0.81
PRPF4-201ENST00000374198 NEXN-AS1Q8NBZ9 246 aa9.98□□□□□ -0.81
PRPF4-201ENST00000374198 RASL10AQ92737 203 aa9.98□□□□□ -0.81
PRPF4-201ENST00000374198 ONECUT1Q9UBC0 465 aa9.98□□□□□ -0.81
PRPF4-201ENST00000374198 RAI1Q7Z5J4 1906 aaPredicted RBP9.98□□□□□ -0.81
PRPF4-201ENST00000374198 LOC400499M0QZD8 3231 aa9.98□□□□□ -0.81
PRPF4-201ENST00000374198 CFC1BP0CG36 223 aa9.98□□□□□ -0.81
PRPF4-201ENST00000374198 CFC1P0CG37 223 aa9.98□□□□□ -0.81
PRPF4-201ENST00000374198 ID1P41134 155 aa9.98□□□□□ -0.81
PRPF4-201ENST00000374198 OR10J6PQ8NGY7 276 aa9.98□□□□□ -0.81
PRPF4-201ENST00000374198 CNTFRP26992 372 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 MDS2Q8NDY4 140 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 ODF3Q96PU9 254 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 MDFICQ9P1T7 246 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 TRAV26-2A0A0B4J265 109 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 TRGV3P03979 118 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 CRYGBP07316 175 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 CRIP2P52943 208 aaPredicted RBP9.97□□□□□ -0.81
PRPF4-201ENST00000374198 TMEM200BQ69YZ2 307 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 Q8N1Y9 231 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 ZNF843Q8N446 348 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 LINC00311Q8N616 119 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 SCGB3A1Q96QR1 104 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 SCGB2A1O75556 95 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 IL17RELQ6ZVW7 336 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 PPDPFQ9H3Y8 114 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 SIGLEC9Q9Y336 463 aa9.97□□□□□ -0.81
PRPF4-201ENST00000374198 ABCA1O95477 2261 aa9.96□□□□□ -0.81
PRPF4-201ENST00000374198 TNFAIP6P98066 277 aaPredicted RBP9.96□□□□□ -0.81
PRPF4-201ENST00000374198 C15orf53Q8NAA6 179 aa9.96□□□□□ -0.81
PRPF4-201ENST00000374198 KLHL30-AS1Q8NEE0 82 aa9.96□□□□□ -0.81
PRPF4-201ENST00000374198 PRO1854Q9UHT4 67 aa9.96□□□□□ -0.81
PRPF4-201ENST00000374198 ZNF672Q499Z4 452 aaPredicted RBP9.96□□□□□ -0.82
PRPF4-201ENST00000374198 NTN5Q8WTR8 489 aaPredicted RBP9.96□□□□□ -0.82
PRPF4-201ENST00000374198 TMEM126AQ9H061 195 aa9.96□□□□□ -0.82
PRPF4-201ENST00000374198 KLK15Q9H2R5 256 aa9.96□□□□□ -0.82
PRPF4-201ENST00000374198 SPTA1P02549 2419 aa9.96□□□□□ -0.82
PRPF4-201ENST00000374198 MED13Q9UHV7 2174 aa9.95□□□□□ -0.82
PRPF4-201ENST00000374198 A0A0J9YY99 117 aa9.95□□□□□ -0.82
PRPF4-201ENST00000374198 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
PRPF4-201ENST00000374198 C8orf31Q8N9H6 132 aa9.95□□□□□ -0.82
PRPF4-201ENST00000374198 FDCSPQ8NFU4 85 aa9.95□□□□□ -0.82
PRPF4-201ENST00000374198 TOMM6Q96B49 74 aa9.95□□□□□ -0.82
PRPF4-201ENST00000374198 ATMQ13315 3056 aa9.95□□□□□ -0.82
PRPF4-201ENST00000374198 K7EIM0 57 aa9.95□□□□□ -0.82
PRPF4-201ENST00000374198 TEX36Q5VZQ5 186 aa9.95□□□□□ -0.82
PRPF4-201ENST00000374198 TRPT1Q86TN4 253 aaKnown RBP9.95□□□□□ -0.82
PRPF4-201ENST00000374198 TRAV8-4A0A0B4J246 113 aa9.94□□□□□ -0.82
PRPF4-201ENST00000374198 IGHV3-30P01768 117 aa9.94□□□□□ -0.82
PRPF4-201ENST00000374198 IGHV3-30-5P0DP03 117 aa9.94□□□□□ -0.82
PRPF4-201ENST00000374198 COL6A6A6NMZ7 2263 aa9.94□□□□□ -0.82
PRPF4-201ENST00000374198 BAALCQ8WXS3 180 aa9.94□□□□□ -0.82
PRPF4-201ENST00000374198 SMIM2Q9BVW6 85 aa9.94□□□□□ -0.82
PRPF4-201ENST00000374198 IGHV1-46P01743 117 aa9.93□□□□□ -0.82
PRPF4-201ENST00000374198 GLRXP35754 106 aa9.93□□□□□ -0.82
PRPF4-201ENST00000374198 ERCC8Q13216 396 aa9.93□□□□□ -0.82
PRPF4-201ENST00000374198 ORMDL2Q53FV1 153 aa9.93□□□□□ -0.82
PRPF4-201ENST00000374198 SLC25A15Q9Y619 301 aa9.93□□□□□ -0.82
PRPF4-201ENST00000374198 TLN1Q9Y490 2541 aaKnown RBP9.93□□□□□ -0.82
PRPF4-201ENST00000374198 IGLV3-9A0A075B6K5 115 aa9.93□□□□□ -0.82
PRPF4-201ENST00000374198 FAM57AQ8TBR7 257 aa9.93□□□□□ -0.82
PRPF4-201ENST00000374198 IGFL4Q6B9Z1 124 aa9.92□□□□□ -0.82
PRPF4-201ENST00000374198 RPL13AP40429 203 aaKnown RBP9.92□□□□□ -0.82
PRPF4-201ENST00000374198 KLRB1Q12918 225 aa9.92□□□□□ -0.82
PRPF4-201ENST00000374198 C9orf106Q8NAJ2 232 aa9.92□□□□□ -0.82
PRPF4-201ENST00000374198 CFHR4Q92496 578 aa9.92□□□□□ -0.82
PRPF4-201ENST00000374198 RAB1BQ9H0U4 201 aa9.92□□□□□ -0.82
PRPF4-201ENST00000374198 IGKV3D-20A0A0C4DH25 116 aa9.92□□□□□ -0.82
PRPF4-201ENST00000374198 TEX49A0A1B0GTD5 131 aa9.92□□□□□ -0.82
PRPF4-201ENST00000374198 M0R1B8 84 aa9.92□□□□□ -0.82
PRPF4-201ENST00000374198 TMEM155Q4W5P6 130 aa9.92□□□□□ -0.82
PRPF4-201ENST00000374198 Q6ZS46 218 aa9.92□□□□□ -0.82
PRPF4-201ENST00000374198 TRAV2A0A0B4J234 112 aa9.91□□□□□ -0.82
PRPF4-201ENST00000374198 SLC25A29Q8N8R3 303 aa9.91□□□□□ -0.82
PRPF4-201ENST00000374198 LINC01587Q99440 93 aa9.91□□□□□ -0.82
PRPF4-201ENST00000374198 RPL7P18124 248 aaKnown RBP9.91□□□□□ -0.82
PRPF4-201ENST00000374198 LINC01600Q96MT4 127 aa9.91□□□□□ -0.82
PRPF4-201ENST00000374198 J3KRW8 73 aa9.9□□□□□ -0.82
PRPF4-201ENST00000374198 C3orf56Q8N813 242 aa9.9□□□□□ -0.82
PRPF4-201ENST00000374198 NRGNQ92686 78 aa9.9□□□□□ -0.82
PRPF4-201ENST00000374198 CHCHD5Q9BSY4 110 aa9.9□□□□□ -0.82
PRPF4-201ENST00000374198 P0DMU3 169 aa9.9□□□□□ -0.83
PRPF4-201ENST00000374198 FAM231AP0DMU4 169 aa9.9□□□□□ -0.83
PRPF4-201ENST00000374198 FAM231CP0DMU5 169 aa9.9□□□□□ -0.83
PRPF4-201ENST00000374198 MRPL23Q16540 153 aaKnown RBP9.9□□□□□ -0.83
PRPF4-201ENST00000374198 TIMD4Q96H15 378 aa9.9□□□□□ -0.83
PRPF4-201ENST00000374198 TIMM23O14925 209 aa9.89□□□□□ -0.83
PRPF4-201ENST00000374198 IGHV3-33P01772 117 aa9.89□□□□□ -0.83
PRPF4-201ENST00000374198 LINC01620Q4KN68 170 aa9.89□□□□□ -0.83
PRPF4-201ENST00000374198 DYNAPQ8N1N2 210 aa9.89□□□□□ -0.83
PRPF4-201ENST00000374198 S4R3C0 116 aa9.89□□□□□ -0.83
PRPF4-201ENST00000374198 KALRNO60229 2985 aa9.89□□□□□ -0.83
PRPF4-201ENST00000374198 ZNF462Q96JM2 2506 aa9.89□□□□□ -0.83
PRPF4-201ENST00000374198 IGHV7-4-1A0A0J9YVY3 117 aa9.89□□□□□ -0.83
PRPF4-201ENST00000374198 LGALS9O00182 355 aa9.89□□□□□ -0.83
PRPF4-201ENST00000374198 HERVK_113P61574 105 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms