RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 PRNTQ86SH4 94 aa10.97□□□□□ -0.65
HMGA1-203ENST00000374116 C17orf77Q96MU5 243 aa10.97□□□□□ -0.65
HMGA1-203ENST00000374116 STAB1Q9NY15 2570 aa10.96□□□□□ -0.65
HMGA1-203ENST00000374116 NDUFA7O95182 113 aa10.96□□□□□ -0.65
HMGA1-203ENST00000374116 BOD1L2Q8IYS8 172 aa10.96□□□□□ -0.65
HMGA1-203ENST00000374116 OR4X2Q8NGF9 303 aa10.96□□□□□ -0.65
HMGA1-203ENST00000374116 ATP6V0BQ99437 205 aa10.96□□□□□ -0.65
HMGA1-203ENST00000374116 TRAV8-1A0A0A6YYK1 113 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 TMEM89A2RUT3 159 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 G3V318 75 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 H3BUT2 72 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 ATP6V0E1O15342 81 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 IGHG2P01859 326 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 CTSGP08311 255 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 KRTAP10-3P60369 221 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 Q8N2B8 174 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 GATD1Q8NB37 220 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 CLUHP3Q96NS8 147 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 SIGMAR1Q99720 223 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 AAMDCQ9H7C9 122 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 CLPSL1A2RUU4 121 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 RPL7P18124 248 aaKnown RBP10.95□□□□□ -0.66
HMGA1-203ENST00000374116 CAMPP49913 170 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 FOXI2Q6ZQN5 318 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 RBPMS2Q6ZRY4 209 aaKnown RBP10.95□□□□□ -0.66
HMGA1-203ENST00000374116 FA2HQ7L5A8 372 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 C16orf95Q9H693 158 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 SPCS1Q9Y6A9 102 aa10.95□□□□□ -0.66
HMGA1-203ENST00000374116 SERTM2A0A1B0GWG4 89 aa10.94□□□□□ -0.66
HMGA1-203ENST00000374116 IGHV3-23P01764 117 aa10.94□□□□□ -0.66
HMGA1-203ENST00000374116 ECSCRQ19T08 205 aa10.94□□□□□ -0.66
HMGA1-203ENST00000374116 GTSF1Q8WW33 167 aa10.94□□□□□ -0.66
HMGA1-203ENST00000374116 ZNF747Q9BV97 191 aa10.94□□□□□ -0.66
HMGA1-203ENST00000374116 RABAC1Q9UI14 185 aa10.94□□□□□ -0.66
HMGA1-203ENST00000374116 PSG8Q9UQ74 426 aa10.94□□□□□ -0.66
HMGA1-203ENST00000374116 AZU1P20160 251 aa10.93□□□□□ -0.66
HMGA1-203ENST00000374116 PROK1P58294 105 aa10.93□□□□□ -0.66
HMGA1-203ENST00000374116 TCTEX1D4Q5JR98 221 aa10.93□□□□□ -0.66
HMGA1-203ENST00000374116 LCNL1Q6ZST4 164 aa10.93□□□□□ -0.66
HMGA1-203ENST00000374116 SPATA25Q9BR10 227 aa10.93□□□□□ -0.66
HMGA1-203ENST00000374116 CSN1S1P47710 185 aa10.93□□□□□ -0.66
HMGA1-203ENST00000374116 C15orf32Q32M92 178 aa10.93□□□□□ -0.66
HMGA1-203ENST00000374116 C19orf54Q5BKX5 351 aa10.93□□□□□ -0.66
HMGA1-203ENST00000374116 ADAMTSL5Q6ZMM2 481 aa10.93□□□□□ -0.66
HMGA1-203ENST00000374116 ZNF502Q8TBZ5 544 aa10.93□□□□□ -0.66
HMGA1-203ENST00000374116 SIGLEC8Q9NYZ4 499 aa10.93□□□□□ -0.66
HMGA1-203ENST00000374116 CRIP2P52943 208 aaPredicted RBP10.92□□□□□ -0.66
HMGA1-203ENST00000374116 FOXA3P55318 350 aaPredicted RBP10.92□□□□□ -0.66
HMGA1-203ENST00000374116 ZC2HC1AQ96GY0 325 aa10.92□□□□□ -0.66
HMGA1-203ENST00000374116 PGLYRP4Q96LB8 373 aa10.92□□□□□ -0.66
HMGA1-203ENST00000374116 FABP2P12104 132 aa10.91□□□□□ -0.66
HMGA1-203ENST00000374116 FOXE3Q13461 319 aa10.91□□□□□ -0.66
HMGA1-203ENST00000374116 LGALS9BQ3B8N2 356 aa10.91□□□□□ -0.66
HMGA1-203ENST00000374116 CD300EQ496F6 205 aaPredicted RBP10.91□□□□□ -0.66
HMGA1-203ENST00000374116 PSMG4Q5JS54 123 aa10.91□□□□□ -0.66
HMGA1-203ENST00000374116 LGALS9CQ6DKI2 356 aa10.91□□□□□ -0.66
HMGA1-203ENST00000374116 FBLL1A6NHQ2 334 aaKnown RBP10.91□□□□□ -0.66
HMGA1-203ENST00000374116 ZNF785A8K8V0 405 aa10.91□□□□□ -0.66
HMGA1-203ENST00000374116 CD28P10747 220 aa10.91□□□□□ -0.66
HMGA1-203ENST00000374116 RAB9AP51151 201 aa10.91□□□□□ -0.66
HMGA1-203ENST00000374116 WFDC12Q8WWY7 111 aa10.91□□□□□ -0.66
HMGA1-203ENST00000374116 J3QR89 54 aa10.9□□□□□ -0.66
HMGA1-203ENST00000374116 M0R3E3 92 aa10.9□□□□□ -0.66
HMGA1-203ENST00000374116 C3orf56Q8N813 242 aa10.9□□□□□ -0.66
HMGA1-203ENST00000374116 TRAV41A0A0B4J266 112 aa10.89□□□□□ -0.67
HMGA1-203ENST00000374116 TEX48A0A1B0GUV7 120 aa10.89□□□□□ -0.67
HMGA1-203ENST00000374116 APOHP02749 345 aaPredicted RBP10.89□□□□□ -0.67
HMGA1-203ENST00000374116 IGF1P05019 195 aa10.89□□□□□ -0.67
HMGA1-203ENST00000374116 CLEC3BP05452 202 aa10.89□□□□□ -0.67
HMGA1-203ENST00000374116 EEF1AKMT3Q96AZ1 226 aa10.89□□□□□ -0.67
HMGA1-203ENST00000374116 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.88□□□□□ -0.67
HMGA1-203ENST00000374116 TRBV7-1A0A0A6YYK4 115 aa10.88□□□□□ -0.67
HMGA1-203ENST00000374116 CT45A10P0DMU9 189 aa10.88□□□□□ -0.67
HMGA1-203ENST00000374116 ZFAND3Q9H8U3 227 aa10.88□□□□□ -0.67
HMGA1-203ENST00000374116 AP5S1Q9NUS5 200 aa10.88□□□□□ -0.67
HMGA1-203ENST00000374116 SMAD5-AS1Q9Y6J3 95 aa10.88□□□□□ -0.67
HMGA1-203ENST00000374116 A0A1W2PRX2 142 aa10.88□□□□□ -0.67
HMGA1-203ENST00000374116 GAGE12HA6NDE8 117 aa10.88□□□□□ -0.67
HMGA1-203ENST00000374116 Q6AWC8 147 aa10.88□□□□□ -0.67
HMGA1-203ENST00000374116 COX8CQ7Z4L0 72 aa10.88□□□□□ -0.67
HMGA1-203ENST00000374116 KLK15Q9H2R5 256 aa10.88□□□□□ -0.67
HMGA1-203ENST00000374116 HIGD1BQ9P298 99 aa10.88□□□□□ -0.67
HMGA1-203ENST00000374116 A0A1B0GW15 77 aa10.87□□□□□ -0.67
HMGA1-203ENST00000374116 CHEK1O14757 476 aa10.87□□□□□ -0.67
HMGA1-203ENST00000374116 PPIFP30405 207 aaKnown RBP10.87□□□□□ -0.67
HMGA1-203ENST00000374116 CRIP1P50238 77 aa10.87□□□□□ -0.67
HMGA1-203ENST00000374116 KHDC1LQ5JSQ8 128 aa10.87□□□□□ -0.67
HMGA1-203ENST00000374116 C18orf65Q6ZTR6 163 aa10.87□□□□□ -0.67
HMGA1-203ENST00000374116 MTURNQ8N3F0 131 aa10.87□□□□□ -0.67
HMGA1-203ENST00000374116 CCDC140Q96MF4 163 aa10.87□□□□□ -0.67
HMGA1-203ENST00000374116 CITED2Q99967 270 aaPredicted RBP10.87□□□□□ -0.67
HMGA1-203ENST00000374116 GTSF1LQ9H1H1 148 aa10.87□□□□□ -0.67
HMGA1-203ENST00000374116 TRRAPQ9Y4A5 3859 aa10.87□□□□□ -0.67
HMGA1-203ENST00000374116 A0A1B0GUT8 65 aa10.86□□□□□ -0.67
HMGA1-203ENST00000374116 BRI3O95415 125 aa10.86□□□□□ -0.67
HMGA1-203ENST00000374116 CFHR3Q02985 330 aa10.86□□□□□ -0.67
HMGA1-203ENST00000374116 RIGQ13278 110 aa10.86□□□□□ -0.67
HMGA1-203ENST00000374116 SAMD5Q5TGI4 173 aa10.86□□□□□ -0.67
HMGA1-203ENST00000374116 F8W1H4 67 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms