RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 OR10J6PQ8NGY7 276 aa10.85□□□□□ -0.67
SMPDL3B-201ENST00000373888 GNB1LQ9BYB4 327 aa10.85□□□□□ -0.67
SMPDL3B-201ENST00000373888 C19orf71A6NCJ1 209 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 FAM231BA6NCW3 169 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 TMEM238C9JI98 176 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 NPIPB6E9PJ23 425 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 P01737 135 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 HLA-DRB4P13762 266 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 KRTAP10-11P60412 298 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 HIST1H1AQ02539 215 aaPredicted RBP10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 EBLN2Q6P2I7 272 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 TSKUQ8WUA8 353 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 VGLL1Q99990 258 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 GFRA4Q9GZZ7 299 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 RPP21Q9H633 154 aaKnown RBP10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 NAT8BQ9UHF3 227 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 HLA-DRB4X5D2U9 266 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 SORL1Q92673 2214 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 DNHD1Q96M86 4753 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 TRAV8-1A0A0A6YYK1 113 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 ZNF705DP0CH99 300 aaPredicted RBP10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 ZNF705BP0CI00 300 aaPredicted RBP10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 ODF1Q14990 250 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 AGPAT4-IT1Q9H0P7 198 aa10.84□□□□□ -0.67
SMPDL3B-201ENST00000373888 KNCNA6PVL3 124 aa10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 DUSP14O95147 198 aaKnown RBP10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 PPBPP02775 128 aa10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 CT45A10P0DMU9 189 aa10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 ERCC8Q13216 396 aa10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 COA6Q5JTJ3 125 aaKnown RBP10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 TMEM78Q5T7P6 136 aa10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 COX8CQ7Z4L0 72 aa10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 ATP5L2Q7Z4Y8 100 aa10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 Q8N1Y9 231 aa10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 SGK494Q96LW2 274 aa10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 LINC00477Q96M19 166 aa10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 WFDC10AQ9H1F0 79 aa10.83□□□□□ -0.68
SMPDL3B-201ENST00000373888 MGAM2Q2M2H8 2515 aa10.82□□□□□ -0.68
SMPDL3B-201ENST00000373888 A8MTW9 85 aa10.82□□□□□ -0.68
SMPDL3B-201ENST00000373888 H3BMM0 161 aa10.82□□□□□ -0.68
SMPDL3B-201ENST00000373888 HLA-DQA1P01909 254 aa10.82□□□□□ -0.68
SMPDL3B-201ENST00000373888 PRR25Q96S07 402 aa10.82□□□□□ -0.68
SMPDL3B-201ENST00000373888 ZNF25P17030 456 aaPredicted RBP10.81□□□□□ -0.68
SMPDL3B-201ENST00000373888 ZNF138P52744 262 aa10.81□□□□□ -0.68
SMPDL3B-201ENST00000373888 KPRPQ5T749 579 aaPredicted RBP10.81□□□□□ -0.68
SMPDL3B-201ENST00000373888 CLUHP3Q96NS8 147 aa10.81□□□□□ -0.68
SMPDL3B-201ENST00000373888 NDFIP1Q9BT67 221 aa10.81□□□□□ -0.68
SMPDL3B-201ENST00000373888 LENEPQ9Y5L5 61 aa10.81□□□□□ -0.68
SMPDL3B-201ENST00000373888 TRBV7-9A0A0J9YWB2 115 aa10.8□□□□□ -0.68
SMPDL3B-201ENST00000373888 H0Y8G0 127 aa10.8□□□□□ -0.68
SMPDL3B-201ENST00000373888 DEFB125Q8N687 156 aa10.8□□□□□ -0.68
SMPDL3B-201ENST00000373888 Q8TAT8 98 aa10.8□□□□□ -0.68
SMPDL3B-201ENST00000373888 FAM19A4Q96LR4 140 aa10.8□□□□□ -0.68
SMPDL3B-201ENST00000373888 ODF3Q96PU9 254 aa10.8□□□□□ -0.68
SMPDL3B-201ENST00000373888 MRPL18Q9H0U6 180 aaKnown RBP10.8□□□□□ -0.68
SMPDL3B-201ENST00000373888 SNURFLB1AK76 121 aa10.79□□□□□ -0.68
SMPDL3B-201ENST00000373888 S100A2P29034 98 aa10.79□□□□□ -0.68
SMPDL3B-201ENST00000373888 TCL1AP56279 114 aa10.79□□□□□ -0.68
SMPDL3B-201ENST00000373888 Q6AWC8 147 aa10.79□□□□□ -0.68
SMPDL3B-201ENST00000373888 AMTNQ6UX39 209 aa10.79□□□□□ -0.68
SMPDL3B-201ENST00000373888 TRPT1Q86TN4 253 aaKnown RBP10.79□□□□□ -0.68
SMPDL3B-201ENST00000373888 STHQ8IWL8 128 aa10.79□□□□□ -0.68
SMPDL3B-201ENST00000373888 NUP35Q8NFH5 326 aa10.79□□□□□ -0.68
SMPDL3B-201ENST00000373888 NDUFAF3Q9BU61 184 aa10.79□□□□□ -0.68
SMPDL3B-201ENST00000373888 HIGD1CA8MV81 97 aa10.79□□□□□ -0.68
SMPDL3B-201ENST00000373888 ZC2HC1AQ96GY0 325 aa10.79□□□□□ -0.68
SMPDL3B-201ENST00000373888 SPXQ9BT56 116 aa10.79□□□□□ -0.68
SMPDL3B-201ENST00000373888 RBMY1BA6NDE4 496 aaKnown RBP10.78□□□□□ -0.68
SMPDL3B-201ENST00000373888 RBMY1EA6NEQ0 496 aaKnown RBP10.78□□□□□ -0.68
SMPDL3B-201ENST00000373888 CA1P00915 261 aaPredicted RBP10.78□□□□□ -0.68
SMPDL3B-201ENST00000373888 RBMY1DP0C7P1 496 aaKnown RBP10.78□□□□□ -0.68
SMPDL3B-201ENST00000373888 CRISP2P16562 243 aa10.78□□□□□ -0.68
SMPDL3B-201ENST00000373888 LINC00322Q6ZN03 302 aaPredicted RBP10.78□□□□□ -0.68
SMPDL3B-201ENST00000373888 TMEM136Q6ZRR5 245 aa10.78□□□□□ -0.68
SMPDL3B-201ENST00000373888 HIST3H2BBQ8N257 126 aa10.78□□□□□ -0.68
SMPDL3B-201ENST00000373888 ASCL2Q99929 193 aa10.78□□□□□ -0.68
SMPDL3B-201ENST00000373888 NBEAL1Q6ZS30 2694 aa10.77□□□□□ -0.69
SMPDL3B-201ENST00000373888 IGKV3-20P01619 116 aa10.77□□□□□ -0.69
SMPDL3B-201ENST00000373888 FOXA3P55318 350 aaPredicted RBP10.77□□□□□ -0.69
SMPDL3B-201ENST00000373888 FAM162BQ5T6X4 162 aa10.77□□□□□ -0.69
SMPDL3B-201ENST00000373888 TMEM208Q9BTX3 173 aa10.77□□□□□ -0.69
SMPDL3B-201ENST00000373888 AGRNO00468 2067 aa10.76□□□□□ -0.69
SMPDL3B-201ENST00000373888 DNAH3Q8TD57 4116 aa10.76□□□□□ -0.69
SMPDL3B-201ENST00000373888 K7EP13 123 aa10.76□□□□□ -0.69
SMPDL3B-201ENST00000373888 LEPP41159 167 aa10.76□□□□□ -0.69
SMPDL3B-201ENST00000373888 RPS20P60866 119 aaKnown RBP10.76□□□□□ -0.69
SMPDL3B-201ENST00000373888 MRPL54Q6P161 138 aaKnown RBP10.76□□□□□ -0.69
SMPDL3B-201ENST00000373888 ZFAND2AQ8N6M9 145 aa10.76□□□□□ -0.69
SMPDL3B-201ENST00000373888 C8orf49Q96NF6 230 aa10.76□□□□□ -0.69
SMPDL3B-201ENST00000373888 NOTCH1P46531 2555 aa10.76□□□□□ -0.69
SMPDL3B-201ENST00000373888 A0A1B0GW15 77 aa10.75□□□□□ -0.69
SMPDL3B-201ENST00000373888 KLLNB2CW77 178 aa10.75□□□□□ -0.69
SMPDL3B-201ENST00000373888 TSPOP30536 169 aa10.75□□□□□ -0.69
SMPDL3B-201ENST00000373888 HBBP68871 147 aa10.75□□□□□ -0.69
SMPDL3B-201ENST00000373888 A0A1B0GXF2 115 aa10.74□□□□□ -0.69
SMPDL3B-201ENST00000373888 A8MZ25 164 aa10.74□□□□□ -0.69
SMPDL3B-201ENST00000373888 SPINK4O60575 86 aa10.74□□□□□ -0.69
SMPDL3B-201ENST00000373888 IGHV4-30-4P0DP06 118 aa10.74□□□□□ -0.69
SMPDL3B-201ENST00000373888 SPINK13Q1W4C9 94 aa10.74□□□□□ -0.69
SMPDL3B-201ENST00000373888 CBY3A6NI87 242 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms