RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 IFITM3Q01628 133 aa7.6□□□□□ -1.19
HDAC8-204ENST00000373560 TMEM183BQ1AE95 376 aa7.6□□□□□ -1.19
HDAC8-204ENST00000373560 VWC2Q2TAL6 325 aa7.6□□□□□ -1.19
HDAC8-204ENST00000373560 REG3GQ6UW15 175 aa7.6□□□□□ -1.19
HDAC8-204ENST00000373560 ATRAIDQ6UW56 229 aa7.6□□□□□ -1.19
HDAC8-204ENST00000373560 TMEM183AQ8IXX5 376 aa7.6□□□□□ -1.19
HDAC8-204ENST00000373560 SPACA4Q8TDM5 124 aa7.6□□□□□ -1.19
HDAC8-204ENST00000373560 IGKV2-40A0A087WW87 121 aaPredicted RBP7.59□□□□□ -1.19
HDAC8-204ENST00000373560 IGHV3-73A0A0B4J1V6 119 aa7.59□□□□□ -1.19
HDAC8-204ENST00000373560 MUC21A0A0G2JKD1 596 aa7.59□□□□□ -1.19
HDAC8-204ENST00000373560 PLA2G10O15496 165 aa7.59□□□□□ -1.19
HDAC8-204ENST00000373560 IGKV2D-40P01614 121 aaPredicted RBP7.59□□□□□ -1.19
HDAC8-204ENST00000373560 ANXA3P12429 323 aa7.59□□□□□ -1.19
HDAC8-204ENST00000373560 S100A7P31151 101 aa7.59□□□□□ -1.19
HDAC8-204ENST00000373560 RAB11AP62491 216 aa7.59□□□□□ -1.19
HDAC8-204ENST00000373560 C14orf177Q52M58 125 aa7.59□□□□□ -1.19
HDAC8-204ENST00000373560 TMEM128Q5BJH2 165 aa7.59□□□□□ -1.19
HDAC8-204ENST00000373560 LYZL2Q7Z4W2 148 aa7.59□□□□□ -1.19
HDAC8-204ENST00000373560 Q9UF83 564 aa7.59□□□□□ -1.19
HDAC8-204ENST00000373560 VAX2Q9UIW0 290 aa7.59□□□□□ -1.19
HDAC8-204ENST00000373560 PXMP4Q9Y6I8 212 aa7.59□□□□□ -1.19
HDAC8-204ENST00000373560 A0A0B4J2A0 478 aa7.58□□□□□ -1.2
HDAC8-204ENST00000373560 SMCO3A2RU48 225 aa7.58□□□□□ -1.2
HDAC8-204ENST00000373560 H3BP45 60 aa7.58□□□□□ -1.2
HDAC8-204ENST00000373560 LINC00694P0DN24 101 aa7.58□□□□□ -1.2
HDAC8-204ENST00000373560 ATP5IP56385 69 aaPredicted RBP7.58□□□□□ -1.2
HDAC8-204ENST00000373560 SRPXP78539 464 aa7.58□□□□□ -1.2
HDAC8-204ENST00000373560 LINC00305Q7Z4B0 112 aa7.58□□□□□ -1.2
HDAC8-204ENST00000373560 NIT1Q86X76 327 aa7.58□□□□□ -1.2
HDAC8-204ENST00000373560 Q8TAT8 98 aa7.58□□□□□ -1.2
HDAC8-204ENST00000373560 PLAC8Q9NZF1 115 aa7.58□□□□□ -1.2
HDAC8-204ENST00000373560 SHPKQ9UHJ6 478 aa7.58□□□□□ -1.2
HDAC8-204ENST00000373560 NDUFB6O95139 128 aa7.57□□□□□ -1.2
HDAC8-204ENST00000373560 HLA-DQA1P01909 254 aa7.57□□□□□ -1.2
HDAC8-204ENST00000373560 OR10J4P0C629 311 aa7.57□□□□□ -1.2
HDAC8-204ENST00000373560 BTCP35070 178 aa7.57□□□□□ -1.2
HDAC8-204ENST00000373560 SLC38A11Q08AI6 406 aa7.57□□□□□ -1.2
HDAC8-204ENST00000373560 SRSF9Q13242 221 aaKnown RBP eCLIP7.57□□□□□ -1.2
HDAC8-204ENST00000373560 PPP1R1AQ13522 171 aa7.57□□□□□ -1.2
HDAC8-204ENST00000373560 RHOHQ15669 191 aa7.57□□□□□ -1.2
HDAC8-204ENST00000373560 PRR4Q16378 134 aa7.57□□□□□ -1.2
HDAC8-204ENST00000373560 SPINK6Q6UWN8 80 aa7.57□□□□□ -1.2
HDAC8-204ENST00000373560 NRARPQ7Z6K4 114 aa7.57□□□□□ -1.2
HDAC8-204ENST00000373560 PIGBOS1A0A0B4J2F0 54 aa7.56□□□□□ -1.2
HDAC8-204ENST00000373560 KRTAP23-1A1A580 65 aa7.56□□□□□ -1.2
HDAC8-204ENST00000373560 FBLL1A6NHQ2 334 aaKnown RBP7.56□□□□□ -1.2
HDAC8-204ENST00000373560 ZNF253O75346 499 aa7.56□□□□□ -1.2
HDAC8-204ENST00000373560 SFT2D2O95562 160 aa7.56□□□□□ -1.2
HDAC8-204ENST00000373560 TCRBP04435 133 aa7.56□□□□□ -1.2
HDAC8-204ENST00000373560 UBE2MP61081 183 aaKnown RBP7.56□□□□□ -1.2
HDAC8-204ENST00000373560 DGAT2L7PQ6IED9 249 aa7.56□□□□□ -1.2
HDAC8-204ENST00000373560 BPIFA4PQ86YQ2 179 aa7.56□□□□□ -1.2
HDAC8-204ENST00000373560 C7orf33Q8WU49 177 aa7.56□□□□□ -1.2
HDAC8-204ENST00000373560 PRADC1Q9BSG0 188 aa7.56□□□□□ -1.2
HDAC8-204ENST00000373560 SPXQ9BT56 116 aa7.56□□□□□ -1.2
HDAC8-204ENST00000373560 FLVCR2Q9UPI3 526 aa7.56□□□□□ -1.2
HDAC8-204ENST00000373560 DUXBA0A1W2PPF3 345 aa7.55□□□□□ -1.2
HDAC8-204ENST00000373560 INMT-MINDY4F8WBC2 141 aa7.55□□□□□ -1.2
HDAC8-204ENST00000373560 POLR2GP62487 172 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC8-204ENST00000373560 GTSF1Q8WW33 167 aa7.55□□□□□ -1.2
HDAC8-204ENST00000373560 MARVELD1Q9BSK0 173 aa7.55□□□□□ -1.2
HDAC8-204ENST00000373560 TRBV6-4A0A1B0GX49 114 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 C9orf170A2RU37 121 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 C5orf51A6NDU8 294 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 GAGE12JA6NER3 117 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 H7C1H1 209 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 M0R2P5 195 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 WRBO00258 174 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 NDUFB4O95168 129 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 RPL19P84098 196 aaKnown RBP7.54□□□□□ -1.2
HDAC8-204ENST00000373560 GAGE1Q13065 139 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 GAGE4Q13068 117 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 GAGE5Q13069 117 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 ENHOQ6UWT2 76 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 Q6ZNX1 250 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 EXOC3-AS1Q8N2X6 119 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 DPH3Q96FX2 82 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 C2orf50Q96LR7 162 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 GPN1Q9HCN4 374 aaPredicted RBP7.54□□□□□ -1.2
HDAC8-204ENST00000373560 CACFD1Q9UGQ2 172 aa7.54□□□□□ -1.2
HDAC8-204ENST00000373560 GNRH2O43555 120 aa7.53□□□□□ -1.2
HDAC8-204ENST00000373560 HOXB5P09067 269 aa7.53□□□□□ -1.2
HDAC8-204ENST00000373560 RRAS2P62070 204 aaPredicted RBP7.53□□□□□ -1.2
HDAC8-204ENST00000373560 SPANXN5Q5MJ07 72 aa7.53□□□□□ -1.2
HDAC8-204ENST00000373560 CFAP126Q5VTH2 177 aa7.53□□□□□ -1.2
HDAC8-204ENST00000373560 MRPL53Q96EL3 112 aaKnown RBP7.53□□□□□ -1.2
HDAC8-204ENST00000373560 RNF185Q96GF1 192 aa7.53□□□□□ -1.2
HDAC8-204ENST00000373560 C20orf85Q9H1P6 137 aa7.53□□□□□ -1.2
HDAC8-204ENST00000373560 OR51M1Q9H341 326 aa7.53□□□□□ -1.2
HDAC8-204ENST00000373560 NUDT15Q9NV35 164 aa7.53□□□□□ -1.2
HDAC8-204ENST00000373560 ZNF492Q9P255 531 aa7.53□□□□□ -1.2
HDAC8-204ENST00000373560 SLPIP03973 132 aa7.52□□□□□ -1.21
HDAC8-204ENST00000373560 NMBP08949 121 aa7.52□□□□□ -1.21
HDAC8-204ENST00000373560 SLC25A6P12236 298 aa7.52□□□□□ -1.21
HDAC8-204ENST00000373560 C4orf46Q504U0 113 aa7.52□□□□□ -1.21
HDAC8-204ENST00000373560 LYPD6BQ8NI32 183 aa7.52□□□□□ -1.21
HDAC8-204ENST00000373560 C1orf43Q9BWL3 253 aa7.52□□□□□ -1.21
HDAC8-204ENST00000373560 NAGKQ9UJ70 344 aa7.52□□□□□ -1.21
HDAC8-204ENST00000373560 TRGV11A0A075B6L2 103 aa7.51□□□□□ -1.21
HDAC8-204ENST00000373560 TRAV6A0A075B6T7 132 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms