RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 RNF185Q96GF1 192 aa14.69□□□□□ -0.06
HDAC1-201ENST00000373548 PRELID3AQ96N28 172 aa14.69□□□□□ -0.06
HDAC1-201ENST00000373548 LINC01619G3V211 115 aa14.68□□□□□ -0.06
HDAC1-201ENST00000373548 SNAI2O43623 268 aa14.68□□□□□ -0.06
HDAC1-201ENST00000373548 OR5AL1P0C617 328 aa14.68□□□□□ -0.06
HDAC1-201ENST00000373548 PSMG4Q5JS54 123 aa14.68□□□□□ -0.06
HDAC1-201ENST00000373548 KHDC1LQ5JSQ8 128 aa14.68□□□□□ -0.06
HDAC1-201ENST00000373548 EBLN2Q6P2I7 272 aa14.68□□□□□ -0.06
HDAC1-201ENST00000373548 TDRG1Q3Y452 100 aa14.68□□□□□ -0.06
HDAC1-201ENST00000373548 OR11H1Q8NG94 326 aa14.68□□□□□ -0.06
HDAC1-201ENST00000373548 RAB4AP20338 218 aa14.67□□□□□ -0.06
HDAC1-201ENST00000373548 DDTP30046 118 aa14.67□□□□□ -0.06
HDAC1-201ENST00000373548 HIST2H2BDQ6DRA6 164 aa14.67□□□□□ -0.06
HDAC1-201ENST00000373548 DUX3Q96PT4 197 aa14.67□□□□□ -0.06
HDAC1-201ENST00000373548 SMKR1H3BMG3 65 aa14.66□□□□□ -0.06
HDAC1-201ENST00000373548 H3BVH4 76 aa14.66□□□□□ -0.06
HDAC1-201ENST00000373548 SNRPD3P62318 126 aaKnown RBP14.66□□□□□ -0.06
HDAC1-201ENST00000373548 KLLNB2CW77 178 aa14.66□□□□□ -0.06
HDAC1-201ENST00000373548 CKS2P33552 79 aa14.66□□□□□ -0.06
HDAC1-201ENST00000373548 ANXA2RQ3ZCQ2 193 aa14.66□□□□□ -0.06
HDAC1-201ENST00000373548 OR1N2Q8NGR9 330 aa14.66□□□□□ -0.06
HDAC1-201ENST00000373548 IGHV4-4A0A075B6R2 117 aa14.65□□□□□ -0.06
HDAC1-201ENST00000373548 NCR2O95944 276 aa14.65□□□□□ -0.06
HDAC1-201ENST00000373548 KLHL30-AS1Q8NEE0 82 aa14.65□□□□□ -0.06
HDAC1-201ENST00000373548 PRSS3P2Q8NHM4 247 aa14.65□□□□□ -0.06
HDAC1-201ENST00000373548 DPF1Q92782 380 aa14.65□□□□□ -0.06
HDAC1-201ENST00000373548 AKAP9Q99996 3911 aa14.65□□□□□ -0.06
HDAC1-201ENST00000373548 KIR2DL5BA0A0G2JN68 375 aa14.65□□□□□ -0.06
HDAC1-201ENST00000373548 KIR2DL5BA0A0G2JPC4 375 aa14.65□□□□□ -0.06
HDAC1-201ENST00000373548 NPYP01303 97 aa14.65□□□□□ -0.06
HDAC1-201ENST00000373548 KIR2DL5AQ8N109 375 aa14.65□□□□□ -0.06
HDAC1-201ENST00000373548 AP5S1Q9NUS5 200 aa14.65□□□□□ -0.06
HDAC1-201ENST00000373548 A0A0J9YX75 114 aa14.64□□□□□ -0.07
HDAC1-201ENST00000373548 IFI27P40305 119 aaPredicted RBP14.64□□□□□ -0.07
HDAC1-201ENST00000373548 FA2HQ7L5A8 372 aa14.64□□□□□ -0.07
HDAC1-201ENST00000373548 SIGLEC8Q9NYZ4 499 aa14.64□□□□□ -0.07
HDAC1-201ENST00000373548 LOC389332A0A1B0GUA5 103 aa14.63□□□□□ -0.07
HDAC1-201ENST00000373548 BTF3P20290 206 aaKnown RBP14.63□□□□□ -0.07
HDAC1-201ENST00000373548 EVI2AP22794 236 aa14.63□□□□□ -0.07
HDAC1-201ENST00000373548 CACNG7P62955 275 aa14.63□□□□□ -0.07
HDAC1-201ENST00000373548 LINC00173Q6ZV60 143 aa14.63□□□□□ -0.07
HDAC1-201ENST00000373548 WFDC12Q8WWY7 111 aa14.63□□□□□ -0.07
HDAC1-201ENST00000373548 SPANXN1Q5VSR9 72 aa14.63□□□□□ -0.07
HDAC1-201ENST00000373548 OR9G4Q8NGQ1 327 aa14.63□□□□□ -0.07
HDAC1-201ENST00000373548 TIMM8BQ9Y5J9 83 aaPredicted RBP14.63□□□□□ -0.07
HDAC1-201ENST00000373548 GAS8-AS1O95177 125 aa14.62□□□□□ -0.07
HDAC1-201ENST00000373548 LEPROTL1O95214 131 aa14.62□□□□□ -0.07
HDAC1-201ENST00000373548 DLX4Q92988 240 aaPredicted RBP14.62□□□□□ -0.07
HDAC1-201ENST00000373548 AGRNO00468 2067 aa14.62□□□□□ -0.07
HDAC1-201ENST00000373548 PPBPP02775 128 aa14.62□□□□□ -0.07
HDAC1-201ENST00000373548 ASIPP42127 132 aa14.62□□□□□ -0.07
HDAC1-201ENST00000373548 ODF3Q96PU9 254 aa14.62□□□□□ -0.07
HDAC1-201ENST00000373548 VAMP8Q9BV40 100 aa14.62□□□□□ -0.07
HDAC1-201ENST00000373548 PEMTQ9UBM1 199 aa14.62□□□□□ -0.07
HDAC1-201ENST00000373548 SORL1Q92673 2214 aa14.62□□□□□ -0.07
HDAC1-201ENST00000373548 RNASE1P07998 156 aaKnown RBP14.61□□□□□ -0.07
HDAC1-201ENST00000373548 PAM16Q9Y3D7 125 aa14.61□□□□□ -0.07
HDAC1-201ENST00000373548 ANK3Q12955 4377 aaKnown RBP14.61□□□□□ -0.07
HDAC1-201ENST00000373548 GNRH2O43555 120 aa14.6□□□□□ -0.07
HDAC1-201ENST00000373548 SPATA12Q7Z6I5 190 aa14.6□□□□□ -0.07
HDAC1-201ENST00000373548 SPRY2O43597 315 aa14.6□□□□□ -0.07
HDAC1-201ENST00000373548 S100A4P26447 101 aaKnown RBP14.6□□□□□ -0.07
HDAC1-201ENST00000373548 DEFA6Q01524 100 aa14.6□□□□□ -0.07
HDAC1-201ENST00000373548 SMIM15Q7Z3B0 74 aa14.6□□□□□ -0.07
HDAC1-201ENST00000373548 TMEM70Q9BUB7 260 aa14.6□□□□□ -0.07
HDAC1-201ENST00000373548 BAHCC1Q9P281 2608 aa14.59□□□□□ -0.07
HDAC1-201ENST00000373548 TCF21O43680 179 aa14.59□□□□□ -0.07
HDAC1-201ENST00000373548 IGKV3-20P01619 116 aa14.59□□□□□ -0.07
HDAC1-201ENST00000373548 MED14OSP0DP75 135 aa14.59□□□□□ -0.07
HDAC1-201ENST00000373548 LEPP41159 167 aa14.59□□□□□ -0.07
HDAC1-201ENST00000373548 C11orf44Q8N8P7 122 aa14.59□□□□□ -0.07
HDAC1-201ENST00000373548 C20orf144Q9BQM9 153 aa14.59□□□□□ -0.07
HDAC1-201ENST00000373548 SCRT2Q9NQ03 307 aa14.59□□□□□ -0.07
HDAC1-201ENST00000373548 RNASE3P12724 160 aaKnown RBP14.59□□□□□ -0.07
HDAC1-201ENST00000373548 SMR3AQ99954 134 aa14.59□□□□□ -0.07
HDAC1-201ENST00000373548 MTORP42345 2549 aa14.59□□□□□ -0.07
HDAC1-201ENST00000373548 NF1P21359 2839 aa14.58□□□□□ -0.08
HDAC1-201ENST00000373548 TRAV12-3A0A0B4J271 114 aa14.58□□□□□ -0.08
HDAC1-201ENST00000373548 C7orf71A4D174 169 aa14.58□□□□□ -0.08
HDAC1-201ENST00000373548 GATA1P15976 413 aaPredicted RBP14.58□□□□□ -0.08
HDAC1-201ENST00000373548 C14orf144Q96I85 54 aa14.58□□□□□ -0.08
HDAC1-201ENST00000373548 LAMTOR2Q9Y2Q5 125 aa14.58□□□□□ -0.08
HDAC1-201ENST00000373548 A0A096LNJ9 63 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 M0R381 172 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 CRXO43186 299 aaPredicted RBP14.57□□□□□ -0.08
HDAC1-201ENST00000373548 TNFRSF6BO95407 300 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 CD28P10747 220 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 SCGB2A2Q13296 93 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 FOXI2Q6ZQN5 318 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 TMEM61Q8N0U2 210 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 RAX2Q96IS3 184 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 SYS1-DBNDD2H3BUS1 97 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 CTAG1AP78358 180 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 ATOH7Q8N100 152 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 LINC01006Q8NI28 216 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 NDUFAF3Q9BU61 184 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 C16orf95Q9H693 158 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 TMEM160Q9NX00 188 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 PHLDA3Q9Y5J5 127 aa14.57□□□□□ -0.08
HDAC1-201ENST00000373548 DUSP14O95147 198 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms