RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 NOTCH4Q99466 2003 aa12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 IGHV1-8P0DP01 117 aa12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 Q6ZUT4 128 aa12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 ANGP03950 147 aaKnown RBP12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 HIVEP3Q5T1R4 2406 aa12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 IGKV1-27A0A075B6S5 117 aa12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 K7ERS5 55 aa12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 RPL18AQ02543 176 aaKnown RBP12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 WFDC11Q8NEX6 87 aa12.31□□□□□ -0.44
GTF3C4-201ENST00000372146 HIGD2BQ4VC39 106 aa12.3□□□□□ -0.44
GTF3C4-201ENST00000372146 C1orf195Q5TG92 126 aa12.3□□□□□ -0.44
GTF3C4-201ENST00000372146 IGKV4-1P06312 121 aa12.3□□□□□ -0.44
GTF3C4-201ENST00000372146 ZNRF2Q8NHG8 242 aa12.3□□□□□ -0.44
GTF3C4-201ENST00000372146 IGKV1-39P01597 117 aa12.3□□□□□ -0.44
GTF3C4-201ENST00000372146 IGKV1D-39P04432 117 aa12.3□□□□□ -0.44
GTF3C4-201ENST00000372146 SLC25A29Q8N8R3 303 aa12.3□□□□□ -0.44
GTF3C4-201ENST00000372146 DEFB121Q5J5C9 76 aa12.3□□□□□ -0.44
GTF3C4-201ENST00000372146 PAX9P55771 341 aa12.29□□□□□ -0.44
GTF3C4-201ENST00000372146 STPG1Q5TH74 334 aa12.29□□□□□ -0.44
GTF3C4-201ENST00000372146 TEX22C9J3V5 150 aa12.29□□□□□ -0.44
GTF3C4-201ENST00000372146 LYNX1G3V0Z9 82 aa12.29□□□□□ -0.44
GTF3C4-201ENST00000372146 ETV2O00321 342 aaPredicted RBP12.29□□□□□ -0.44
GTF3C4-201ENST00000372146 LYNX1P0DP58 116 aa12.29□□□□□ -0.44
GTF3C4-201ENST00000372146 RHPN1-AS1Q9BWJ2 59 aa12.29□□□□□ -0.44
GTF3C4-201ENST00000372146 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
GTF3C4-201ENST00000372146 LINC00205P59089 165 aa12.29□□□□□ -0.44
GTF3C4-201ENST00000372146 SLC25A45Q8N413 288 aa12.29□□□□□ -0.44
GTF3C4-201ENST00000372146 FOXF2Q12947 444 aa12.28□□□□□ -0.44
GTF3C4-201ENST00000372146 BUB1B-PAK6H3BSN5 160 aa12.28□□□□□ -0.44
GTF3C4-201ENST00000372146 H3BQ85 93 aa12.28□□□□□ -0.44
GTF3C4-201ENST00000372146 SIP14410 1827 aa12.28□□□□□ -0.44
GTF3C4-201ENST00000372146 TDRG1Q3Y452 100 aa12.28□□□□□ -0.44
GTF3C4-201ENST00000372146 SMRP1Q8NCR6 262 aa12.28□□□□□ -0.44
GTF3C4-201ENST00000372146 XCL2Q9UBD3 114 aa12.27□□□□□ -0.44
GTF3C4-201ENST00000372146 CRYGSP22914 178 aa12.27□□□□□ -0.45
GTF3C4-201ENST00000372146 DOPEY1Q5JWR5 2465 aa12.27□□□□□ -0.45
GTF3C4-201ENST00000372146 EFNA2O43921 213 aa12.27□□□□□ -0.45
GTF3C4-201ENST00000372146 IGKV1-16P04430 117 aa12.27□□□□□ -0.45
GTF3C4-201ENST00000372146 TRAV4A0A0B4J268 109 aa12.27□□□□□ -0.45
GTF3C4-201ENST00000372146 UQCRQO14949 82 aa12.27□□□□□ -0.45
GTF3C4-201ENST00000372146 BUB3O43684 328 aa12.27□□□□□ -0.45
GTF3C4-201ENST00000372146 CLEC2BQ92478 149 aa12.27□□□□□ -0.45
GTF3C4-201ENST00000372146 A6NED7 52 aa12.27□□□□□ -0.45
GTF3C4-201ENST00000372146 PRR15LQ9BU68 103 aa12.27□□□□□ -0.45
GTF3C4-201ENST00000372146 PLXNA4Q9HCM2 1894 aa12.27□□□□□ -0.45
GTF3C4-201ENST00000372146 ATP6V0E2Q8NHE4 81 aa12.26□□□□□ -0.45
GTF3C4-201ENST00000372146 IGKV1-12A0A0C4DH73 117 aa12.26□□□□□ -0.45
GTF3C4-201ENST00000372146 IGKV1D-12P01611 117 aa12.26□□□□□ -0.45
GTF3C4-201ENST00000372146 ZNF134P52741 427 aa12.26□□□□□ -0.45
GTF3C4-201ENST00000372146 YPEL3P61236 119 aaPredicted RBP12.26□□□□□ -0.45
GTF3C4-201ENST00000372146 C3orf22Q8N5N4 141 aa12.26□□□□□ -0.45
GTF3C4-201ENST00000372146 WISP1O95388 367 aa12.26□□□□□ -0.45
GTF3C4-201ENST00000372146 GPR179Q6PRD1 2367 aa12.26□□□□□ -0.45
GTF3C4-201ENST00000372146 TRBV12-3P01733 135 aa12.26□□□□□ -0.45
GTF3C4-201ENST00000372146 FAM110AQ9BQ89 295 aa12.26□□□□□ -0.45
GTF3C4-201ENST00000372146 MLANAQ16655 118 aa12.25□□□□□ -0.45
GTF3C4-201ENST00000372146 IGLV3-21P80748 117 aaPredicted RBP12.25□□□□□ -0.45
GTF3C4-201ENST00000372146 A0A096LPF7 62 aa12.25□□□□□ -0.45
GTF3C4-201ENST00000372146 SPACA3Q8IXA5 215 aa12.25□□□□□ -0.45
GTF3C4-201ENST00000372146 OPRPNQ99935 248 aaPredicted RBP12.25□□□□□ -0.45
GTF3C4-201ENST00000372146 C20orf78Q9BR46 151 aa12.25□□□□□ -0.45
GTF3C4-201ENST00000372146 ANKRD39Q53RE8 183 aa12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 ETDCA0A1B0GVM5 59 aa12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 H0Y9J4 135 aa12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 C5orf24Q7Z6I8 188 aa12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 IGHV1-18A0A0C4DH31 117 aa12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 TMEM14BQ9NUH8 114 aa12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 IGKV2-29A2NJV5 120 aaPredicted RBP12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 C9orf47Q6ZRZ4 202 aa12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 A4D1N5 150 aa12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 TEX36Q5VZQ5 186 aa12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 SDIM1Q6ZPB5 146 aa12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 DAND5Q8N907 189 aa12.24□□□□□ -0.45
GTF3C4-201ENST00000372146 PSPNO60542 156 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 TIMM17AQ99595 171 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 PYGO2Q9BRQ0 406 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 WI2-2373I1.2A0A1W2PRP0 233 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 A0A0G2JRQ6 117 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 H0YGX0 51 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 FXYD2P54710 66 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 LINC01620Q4KN68 170 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 CD177Q8N6Q3 437 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 C9orf106Q8NAJ2 232 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 IGHV1-46P01743 117 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 SND1-IT1Q9HBX3 110 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 COL4A5P29400 1685 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 C20orf173Q96LM9 149 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 TNS1Q9HBL0 1735 aaKnown RBP12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 DEFB131AP59861 70 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 IGF2BP2-AS1Q96M15 143 aa12.23□□□□□ -0.45
GTF3C4-201ENST00000372146 MT-ATP8P03928 68 aa12.22□□□□□ -0.45
GTF3C4-201ENST00000372146 FAM231DQ6ZW35 169 aa12.22□□□□□ -0.45
GTF3C4-201ENST00000372146 K7EN84 100 aa12.22□□□□□ -0.45
GTF3C4-201ENST00000372146 METRNQ9UJH8 293 aa12.22□□□□□ -0.45
GTF3C4-201ENST00000372146 ZNF747Q9BV97 191 aa12.22□□□□□ -0.45
GTF3C4-201ENST00000372146 TMEM256-PLSCR3K7ERE1 68 aa12.22□□□□□ -0.45
GTF3C4-201ENST00000372146 MINOS1Q5TGZ0 78 aa12.22□□□□□ -0.45
GTF3C4-201ENST00000372146 CASC2Q6XLA1 102 aa12.22□□□□□ -0.45
GTF3C4-201ENST00000372146 MINOS1-NBL1R4GNA1 71 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms