RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 HIST1H2BJP06899 126 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 TRGC1P0CF51 173 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 HIST1H2BOP23527 126 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 HIST1H2BBP33778 126 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 HIST1H2BDP58876 126 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 HIST1H2BCP62807 126 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 HIST2H2BEQ16778 126 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 SPINK13Q1W4C9 94 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.59□□□□□ -0.55
PFDN4-201ENST00000371419 NUDT10Q8NFP7 164 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 OR11H2Q8NH07 326 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 FRZBQ92765 325 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 HIST1H2BHQ93079 126 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 NUDT11Q96G61 164 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 HIST1H2BNQ99877 126 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 HIST1H2BMQ99879 126 aa11.59□□□□□ -0.55
PFDN4-201ENST00000371419 IGKV2-40A0A087WW87 121 aaPredicted RBP11.58□□□□□ -0.56
PFDN4-201ENST00000371419 M0R2Z0 102 aa11.58□□□□□ -0.56
PFDN4-201ENST00000371419 PHOX2AO14813 284 aa11.58□□□□□ -0.56
PFDN4-201ENST00000371419 IGKV2D-40P01614 121 aaPredicted RBP11.58□□□□□ -0.56
PFDN4-201ENST00000371419 IGLV2-11P01706 119 aa11.58□□□□□ -0.56
PFDN4-201ENST00000371419 ERCC8Q13216 396 aa11.58□□□□□ -0.56
PFDN4-201ENST00000371419 PRNTQ86SH4 94 aa11.58□□□□□ -0.56
PFDN4-201ENST00000371419 DAZAP1Q96EP5 407 aaKnown RBP11.58□□□□□ -0.56
PFDN4-201ENST00000371419 SGK494Q96LW2 274 aa11.58□□□□□ -0.56
PFDN4-201ENST00000371419 LINC00477Q96M19 166 aa11.58□□□□□ -0.56
PFDN4-201ENST00000371419 PSG8Q9UQ74 426 aa11.58□□□□□ -0.56
PFDN4-201ENST00000371419 RBAKDNA6NC62 111 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 CT45A10P0DMU9 189 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 TSPOP30536 169 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 NDUFA6P56556 154 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 FABP9Q0Z7S8 132 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 CT83Q5H943 113 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 PRR27Q6MZM9 219 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 C9orf47Q6ZRZ4 202 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 ODF3Q96PU9 254 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 AGPAT4-IT1Q9H0P7 198 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 TRAPPC1Q9Y5R8 145 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 CDKN1BP46527 198 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 TMEM78Q5T7P6 136 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 VGLL1Q99990 258 aa11.57□□□□□ -0.56
PFDN4-201ENST00000371419 TRAV8-1A0A0A6YYK1 113 aa11.56□□□□□ -0.56
PFDN4-201ENST00000371419 C19orf71A6NCJ1 209 aa11.56□□□□□ -0.56
PFDN4-201ENST00000371419 CRXO43186 299 aaPredicted RBP11.56□□□□□ -0.56
PFDN4-201ENST00000371419 INSP01308 110 aa11.56□□□□□ -0.56
PFDN4-201ENST00000371419 P01737 135 aa11.56□□□□□ -0.56
PFDN4-201ENST00000371419 HOXA5P20719 270 aa11.56□□□□□ -0.56
PFDN4-201ENST00000371419 LEPP41159 167 aa11.56□□□□□ -0.56
PFDN4-201ENST00000371419 SAPCD1Q5SSQ6 148 aa11.56□□□□□ -0.56
PFDN4-201ENST00000371419 WDR73Q6P4I2 378 aa11.56□□□□□ -0.56
PFDN4-201ENST00000371419 RASL11AQ6T310 242 aa11.56□□□□□ -0.56
PFDN4-201ENST00000371419 ZNF705AQ6ZN79 300 aaPredicted RBP11.56□□□□□ -0.56
PFDN4-201ENST00000371419 TSKUQ8WUA8 353 aa11.56□□□□□ -0.56
PFDN4-201ENST00000371419 RPP21Q9H633 154 aaKnown RBP11.56□□□□□ -0.56
PFDN4-201ENST00000371419 GOLT1BQ9Y3E0 138 aa11.56□□□□□ -0.56
PFDN4-201ENST00000371419 TRAV12-2A0A075B6T6 113 aa11.55□□□□□ -0.56
PFDN4-201ENST00000371419 A8MWL6 223 aa11.55□□□□□ -0.56
PFDN4-201ENST00000371419 MT-ND6P03923 174 aa11.55□□□□□ -0.56
PFDN4-201ENST00000371419 GNB1LQ9BYB4 327 aa11.55□□□□□ -0.56
PFDN4-201ENST00000371419 EDA2RQ9HAV5 297 aa11.55□□□□□ -0.56
PFDN4-201ENST00000371419 NAT8BQ9UHF3 227 aa11.55□□□□□ -0.56
PFDN4-201ENST00000371419 FAM231BA6NCW3 169 aa11.54□□□□□ -0.56
PFDN4-201ENST00000371419 AKR1D1P51857 326 aa11.54□□□□□ -0.56
PFDN4-201ENST00000371419 ZNF138P52744 262 aa11.54□□□□□ -0.56
PFDN4-201ENST00000371419 C1orf158Q8N1D5 194 aa11.54□□□□□ -0.56
PFDN4-201ENST00000371419 FAM19A4Q96LR4 140 aa11.54□□□□□ -0.56
PFDN4-201ENST00000371419 WWC2-AS2Q96NR7 200 aa11.54□□□□□ -0.56
PFDN4-201ENST00000371419 GFRA4Q9GZZ7 299 aa11.54□□□□□ -0.56
PFDN4-201ENST00000371419 X6R8D5 127 aa11.54□□□□□ -0.56
PFDN4-201ENST00000371419 IGHV3OR16-12A0A075B7B8 117 aa11.53□□□□□ -0.56
PFDN4-201ENST00000371419 S100A8P05109 93 aa11.53□□□□□ -0.56
PFDN4-201ENST00000371419 MIFP14174 115 aa11.53□□□□□ -0.56
PFDN4-201ENST00000371419 COX8CQ7Z4L0 72 aa11.53□□□□□ -0.56
PFDN4-201ENST00000371419 TMEM208Q9BTX3 173 aa11.53□□□□□ -0.56
PFDN4-201ENST00000371419 A0A0J9YWU9 116 aa11.52□□□□□ -0.56
PFDN4-201ENST00000371419 NEU1Q99519 415 aa11.52□□□□□ -0.56
PFDN4-201ENST00000371419 TRBV7-9A0A0J9YWB2 115 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 SMIM9A6NGZ8 99 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 J3KRW8 73 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 CRISP2P16562 243 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 TCL1AP56279 114 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 KIR3DS1Q14943 382 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 COA6Q5JTJ3 125 aaKnown RBP11.51□□□□□ -0.57
PFDN4-201ENST00000371419 GFI1BQ5VTD9 330 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 ATP5L2Q7Z4Y8 100 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 Q8NAQ8 132 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 Q8TAT8 98 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 C20orf144Q9BQM9 153 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 NDFIP1Q9BT67 221 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 IGHV4-28A0A0C4DH34 117 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 KLLNB2CW77 178 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 HLA-DQA1P01909 254 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 RBMY1A1P0DJD3 496 aaKnown RBP11.51□□□□□ -0.57
PFDN4-201ENST00000371419 RBMY1CP0DJD4 496 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 RBMY1FQ15415 496 aaKnown RBP11.51□□□□□ -0.57
PFDN4-201ENST00000371419 TMEM256Q8N2U0 113 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 NUP35Q8NFH5 326 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
PFDN4-201ENST00000371419 MRPL18Q9H0U6 180 aaKnown RBP11.51□□□□□ -0.57
PFDN4-201ENST00000371419 C11orf68Q9H3H3 251 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms