RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 TGFAP01135 160 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 CTSGP08311 255 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 KLK15Q9H2R5 256 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 IGHV4-4A0A075B6R2 117 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 A0A0J9YY99 117 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 IGHV3-30P01768 117 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 IGHV3-30-5P0DP03 117 aa8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 RPL39LQ96EH5 51 aaKnown RBP8.9□□□□□ -0.98
SMARCA1-201ENST00000371121 MUC4Q99102 2169 aa8.9□□□□□ -0.99
SMARCA1-201ENST00000371121 FABP5P3A8MUU1 101 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 RHODO00212 210 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 IGF1P05019 195 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 SLC25A16P16260 332 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 KAAG1Q9UBP8 84 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 TRAV8-2A0A0B4J237 113 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 ZNF688P0C7X2 276 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 TDHQ8IZJ6 230 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 MYOZ3Q8TDC0 251 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 ANAPC13Q9BS18 74 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 GAGE5Q13069 117 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 GAGE6Q13070 117 aa8.89□□□□□ -0.99
SMARCA1-201ENST00000371121 LOC107984156A0A0G2JMH3 177 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 CDX4O14627 284 aaPredicted RBP8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 NDUFB3O43676 98 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 CFAP161Q6P656 301 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 ARL17AQ8IVW1 177 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 AGPAT4-IT1Q9H0P7 198 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 CLPSL1A2RUU4 121 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 SMIM2Q9BVW6 85 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 IGHV3-35A0A0C4DH35 117 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 TIMM23O14925 209 aa8.88□□□□□ -0.99
SMARCA1-201ENST00000371121 ZNF815PA8K554 130 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 C14orf178Q8N769 122 aaPredicted RBP8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 ODF3Q96PU9 254 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 NBPF19A0A087WUL8 3843 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 VKORC1Q9BQB6 163 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 TRBV20-1A0A075B6N2 111 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 RAXQ9Y2V3 346 aa8.87□□□□□ -0.99
SMARCA1-201ENST00000371121 NDUFV3P56181 108 aaKnown RBP8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 VCX2Q9H322 139 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 ZFAND3Q9H8U3 227 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 C11orf86A6NJI1 115 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 PLGLAQ15195 96 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 TRBV7-9A0A0J9YWB2 115 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 CENPVL3A0A0U1RRI6 287 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 EMP1P54849 157 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 GPHB5Q86YW7 130 aa8.86□□□□□ -0.99
SMARCA1-201ENST00000371121 BSPH1Q075Z2 132 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 OR11H6Q8NGC7 330 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 FAM110AQ9BQ89 295 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 LYNX1G3V0Z9 82 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 LYNX1P0DP58 116 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 COX7A1P24310 79 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 DEFB104AQ8WTQ1 72 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 ARRDC1-AS1Q9H2J1 176 aa8.85□□□□□ -0.99
SMARCA1-201ENST00000371121 ZNRF2Q8NHG8 242 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 BUB3O43684 328 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 DUSP14O95147 198 aaKnown RBP8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 ZNF883P0CG24 379 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 RPL32P62910 135 aaKnown RBP8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 HERV-K104P63124 156 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 ZFAND6Q6FIF0 208 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 NPBQ8NG41 125 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 SCGB3A1Q96QR1 104 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 IGHV3-66A0A0C4DH42 116 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 CNIH1O95406 144 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 RPL7P18124 248 aaKnown RBP8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 C10orf126Q8N4M7 172 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 ONECUT1Q9UBC0 465 aa8.84□□□□□ -0.99
SMARCA1-201ENST00000371121 C2orf66Q6UXQ4 117 aa8.83□□□□□ -1
SMARCA1-201ENST00000371121 POLEQ07864 2286 aa8.83□□□□□ -1
SMARCA1-201ENST00000371121 RAB1BQ9H0U4 201 aa8.83□□□□□ -1
SMARCA1-201ENST00000371121 ANKRD11Q6UB99 2663 aaPredicted RBP8.83□□□□□ -1
SMARCA1-201ENST00000371121 RBAKDNA6NC62 111 aa8.83□□□□□ -1
SMARCA1-201ENST00000371121 IGIPA6NJ69 53 aa8.83□□□□□ -1
SMARCA1-201ENST00000371121 SUMO2P61956 95 aaKnown RBP8.83□□□□□ -1
SMARCA1-201ENST00000371121 SLC25A29Q8N8R3 303 aa8.83□□□□□ -1
SMARCA1-201ENST00000371121 H3BVH4 76 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 NBR2O15453 112 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 PRTN3P24158 256 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 BDP1A6H8Y1 2624 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 MFAP4P55083 255 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 TMEM263Q8WUH6 116 aaKnown RBP8.82□□□□□ -1
SMARCA1-201ENST00000371121 RNASE6Q93091 150 aaKnown RBP8.82□□□□□ -1
SMARCA1-201ENST00000371121 LINC01600Q96MT4 127 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 C21orf62Q9NYP8 219 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 RP1L1Q8IWN7 2480 aaPredicted RBP8.82□□□□□ -1
SMARCA1-201ENST00000371121 TEX49A0A1B0GTD5 131 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 A8MWV9 139 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 LINC00315P59091 139 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 TEX29Q8N6K0 151 aa8.82□□□□□ -1
SMARCA1-201ENST00000371121 M0QXV9 152 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 C20orf173Q96LM9 149 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 CELSR2Q9HCU4 2923 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 SLC25A20O43772 301 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 DEFB1P60022 68 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 Q8N1Y9 231 aa8.81□□□□□ -1
SMARCA1-201ENST00000371121 RNF5Q99942 180 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms